NO26G00130, NO26G00130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00130 vs. NCBI_GenBank
Match: EWM23046.1 (rna recognition motif-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 191.8 bits (486), Expect = 4.000e-45 Identity = 95/142 (66.90%), Postives = 107/142 (75.35%), Query Frame = 0 Query: 1 MSLLGFKLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERSTQGMVDKXXXXXXXXXXXXXXXXXXXXXXXMEVAGRQEDVRLFVGGLPDGCTERDLMD 143 MSL+GFKLFIGNLSK+T+D GLEKYFKDAIGGEIVWAQVCKDRNTG+SKRYGFITFKDEADG RA+EELH++ELDGSKITV+RSTQGM++K E+VRLFVGGLPD C E DLM+ Sbjct: 1 MSLIGFKLFIGNLSKETHDTGLEKYFKDAIGGEIVWAQVCKDRNTGESKRYGFITFKDEADGKRAIEELHETELDGSKITVDRSTQGMIEKDGGGR---------------------GAEDENVRLFVGGLPDNCVEEDLME 121
BLAST of NO26G00130 vs. NCBI_GenBank
Match: EWM23050.1 (Nucleotide-binding, alpha-beta plait [Nannochloropsis gaditana]) HSP 1 Score: 167.5 bits (423), Expect = 8.100e-38 Identity = 76/86 (88.37%), Postives = 83/86 (96.51%), Query Frame = 0 Query: 234 MDGGREVRLFVGGLPEGVSEKDLMHKFRRSDPVEAFLPPRQSKAPLYGFVVIRDEGRNVKEAFALEGDYFDDRCPHRLAVTFSKPR 320 M+GG+EVRLFVGGLPEG ++KDLMHKFRRSDPVEAFLPPRQS APLYGFVV+RDEGRN+KEAFALEGDYFDDR PHR+AVTFSKPR Sbjct: 1 MEGGKEVRLFVGGLPEGCTDKDLMHKFRRSDPVEAFLPPRQSVAPLYGFVVVRDEGRNLKEAFALEGDYFDDRSPHRMAVTFSKPR 86
BLAST of NO26G00130 vs. NCBI_GenBank
Match: PJF20086.1 (hypothetical protein PSACC_00075 [Paramicrosporidium saccamoebae]) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-9 Identity = 82/177 (46.33%), Postives = 106/177 (59.89%), Query Frame = 0 Query: 4 LGFKLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERSTQGMVDKXXXXXXXXXXXXXXXXXXXXXXXMEVAGRQEDVRLFVGGLPDGCTERDLMDLFKDCEPVEAFMC---GSKHPPCGFVTIRRSDANLEKA 178 +GF++F+GNLS D + L+ YF A GEIV K G S YGFITF+ E +AV EL D+EL+G K+ VER+T XXXXXXXXXXXXXXXXXXXXXXX E +G +FVG LP ++DL+++F D + EA + GFVT+ + L+KA Sbjct: 12 VGFRVFVGNLSYDIDTDKLKDYFGQA--GEIVDCIAVK--RYGRSAGYGFITFETEEAADKAV-ELKDTELEGRKVNVERATP---RDXXXXXXXXXXXXXXXXXXXXXXXHEPSGELSKTTMFVGNLPFNVIDQDLINIFGDYQVEEAHVIRHFNGASRGFGFVTL-TGEQELQKA 179
BLAST of NO26G00130 vs. NCBI_GenBank
Match: XP_008776924.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Phoenix dactylifera]) HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9 Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERSTQGMVDKXXXXXXXXXXXXXXXXXXXXXXXMEVAGRQEDVRLFVGGLPDGCTERDLMDLFKD----CEPVEAFMCGSKHP-PCGFVTIRRSDA 173 KLFIG +S DTN+ L +YFK GE+V A + KDR TG ++ +GF+ F D A R + E+H +DG K+ V+++ VD+ G ++FVGGLP TE D F+ + V + ++ P GFVT DA Sbjct: 7 KLFIGGISWDTNEDRLREYFKTY--GEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVLMEMH--VIDGRKVEVKKAVP-RVDQHILNRNNTSIHGS-------------PGPGRTKKIFVGGLPPNITESDFKKYFEQFGNITDVVVMYDHNTQRPRGFGFVTYDLEDA 159
BLAST of NO26G00130 vs. NCBI_GenBank
Match: XP_008776925.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Phoenix dactylifera]) HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9 Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERSTQGMVDKXXXXXXXXXXXXXXXXXXXXXXXMEVAGRQEDVRLFVGGLPDGCTERDLMDLFKD----CEPVEAFMCGSKHP-PCGFVTIRRSDA 173 KLFIG +S DTN+ L +YFK GE+V A + KDR TG ++ +GF+ F D A R + E+H +DG K+ V+++ VD+ G ++FVGGLP TE D F+ + V + ++ P GFVT DA Sbjct: 7 KLFIGGISWDTNEDRLREYFKTY--GEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVLMEMH--VIDGRKVEVKKAVP-RVDQHILNRNNTSIHGS-------------PGPGRTKKIFVGGLPPNITESDFKKYFEQFGNITDVVVMYDHNTQRPRGFGFVTYDLEDA 159
BLAST of NO26G00130 vs. NCBI_GenBank
Match: XP_005538615.1 (probable heterogeneous nuclear RNP protein A [Cyanidioschyzon merolae strain 10D] >BAM82579.1 probable heterogeneous nuclear RNP protein A [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 72.0 bits (175), Expect = 4.600e-9 Identity = 58/203 (28.57%), Postives = 89/203 (43.84%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDG----SKITVERSTQGMVDKXXXXXXXXXXXXXXXXXXXXXXXMEVAGRQEDVRLFVGGLPDGCTERDLMDLFKDCEPVEAFMCGSKH-----PPCGFVTIRRSDANLEKAQSYD--GIYYKDSQWRLAVKAAK 199 K+F+G LS DTN+ L YF+ G+++ A V ++R TG + +GF+TF++E +AV L ELDG +K+ V +S + G + R++V GLP CTE DL F +EA H GFV + A+ +K QS D + S +R+ V+ + Sbjct: 9 KVFVGGLSWDTNEASLVAYFERF--GKVIDAVVMRNRETGQPRGFGFVTFEEEGVA-QAVASLERHELDGRLVETKVAVPKSAEDPESNTVVDTAQRYGPSG-------------LGEKPSRRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVVFAETAAS-QKVQSLDPENFVIRGSAFRVKVRCCR 194
BLAST of NO26G00130 vs. NCBI_GenBank
Match: OGI72063.1 (RNA-binding protein [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_38_15]) HSP 1 Score: 72.0 bits (175), Expect = 4.600e-9 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERS 85 KLFIG+L+ TND L +F A GE+V A+V ++ TG S+ +GF+ +K EAD A+E+L+ SELDG ITV+ S Sbjct: 4 KLFIGSLAWATNDQSLMSHF--AAIGEVVSARVVTEKMTGRSRGFGFVEYKSEADAATAIEKLNGSELDGRNITVQES 79
BLAST of NO26G00130 vs. NCBI_GenBank
Match: GAQ82239.1 (RNA-binding protein [Klebsormidium nitens]) HSP 1 Score: 71.6 bits (174), Expect = 6.000e-9 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0 Query: 6 FKLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERS 85 F++F+G LS +T+D GLE F G+I A+V +R TG S+ +GF+TFKD+ A++ELH ELDG ITV ++ Sbjct: 9 FRVFVGGLSWNTDDRGLEDAFSKF--GDIADAKVVNERETGRSRGFGFVTFKDDRSMQDAIDELHGKELDGRNITVNKA 85
BLAST of NO26G00130 vs. NCBI_GenBank
Match: KPK16809.1 (hypothetical protein AMJ62_04005 [Myxococcales bacterium SG8_38]) HSP 1 Score: 71.2 bits (173), Expect = 7.900e-9 Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERS 85 KLF+G LS +T LE+ F A GE+V A+V DR++G S+ +GF+TF+D+ RA+EEL S LDG I V+R+ Sbjct: 4 KLFVGGLSWNTTSAALEEAF--AACGEVVEAKVVTDRDSGRSRGFGFVTFQDDQGAARAIEELDGSALDGRTIRVDRA 79
BLAST of NO26G00130 vs. NCBI_GenBank
Match: APR82673.1 (RNA-binding protein [Minicystis rosea]) HSP 1 Score: 70.9 bits (172), Expect = 1.000e-8 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0 Query: 7 KLFIGNLSKDTNDIGLEKYFKDAIGGEIVWAQVCKDRNTGDSKRYGFITFKDEADGIRAVEELHDSELDGSKITVERSTQ 87 KLF+G+LS +T L +F+ G+IV A+V DR TG S+ +GF+ D D + A+ LH SELDGS+I V +T+ Sbjct: 74 KLFVGSLSNETTSADLHAHFESF--GQIVEAKVITDRATGASRNFGFVNMADRKDALAAIAALHQSELDGSRIVVNVATE 151 The following BLAST results are available for this feature:
BLAST of NO26G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00130 ID=NO26G00130|Name=NO26G00130|organism=Nannochloropsis oceanica|type=gene|length=4272bpback to top protein sequence of NO26G00130.1 >NO26G00130.1-protein ID=NO26G00130.1-protein|Name=NO26G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bpback to top Synonyms
Publications
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