NO26G00100, NO26G00100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_005320745.1 (DNA cross-link repair 1A protein [Ictidomys tridecemlineatus] >XP_021579007.1 DNA cross-link repair 1A protein [Ictidomys tridecemlineatus]) HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46 Identity = 105/212 (49.53%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGF-TSPKCSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GTSF VD F + C+AYFLTH+HSDHY GL +F+ ++CSEITG LL KL ++ Q+VH LPM+ ++GV V LLDANHCPGA M++F+L +LHTGDFRA + + A G+KI T+YLDTTYC+ +YTFPSQ V+ A P TL GTYSIGKE+ AVA+ +GSKV + K +TLR Sbjct: 709 KKIPGTSFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGNLLKSKLHVQEQYVHPLPMDTECLVDGVRVVLLDANHCPGATMILFYLPN-GAVVLHTGDFRADPSMERSLLA-----GQKIHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRTLVVCGTYSIGKEKVFLAVADVLGSKVGMSREKFQTLR 913
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_011357567.1 (DNA cross-link repair 1A protein [Pteropus vampyrus] >XP_011357568.1 DNA cross-link repair 1A protein [Pteropus vampyrus]) HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46 Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GTSF VD F + + C+AYFLTH+HSDHY GL +F+ ++CSEITG LL KL ++ Q++H LP++ + GV+V LLDANHCPGAVM++F+L N T LHTGDFRA + + A G+K+ T+YLDTTYC+ +Y+FPSQ V+ A P TL GTYSIGKE+ A+A+ +GSKV K K +TL+ Sbjct: 719 KKIPGTSFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGNLLKSKLHVQEQYIHSLPVDTECVVNGVKVVLLDANHCPGAVMILFYLPNGNVT-LHTGDFRADPTMERSLLA-----GQKVHTLYLDTTYCSPEYSFPSQQEVIQFAVNTAFEAVTLNPRTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYKTLQ 923
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_006920909.1 (PREDICTED: DNA cross-link repair 1A protein [Pteropus alecto] >XP_006920910.1 PREDICTED: DNA cross-link repair 1A protein [Pteropus alecto]) HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46 Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GTSF VD F + + C+AYFLTH+HSDHY GL +F+ ++CSEITG LL KL ++ Q++H LP++ + GV+V LLDANHCPGAVM++F+L N T LHTGDFRA + + A G+K+ T+YLDTTYC+ +Y+FPSQ V+ A P TL GTYSIGKE+ A+A+ +GSKV K K +TL+ Sbjct: 719 KKIPGTSFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGNLLKSKLHVQEQYIHSLPVDTECVVNGVKVVLLDANHCPGAVMILFYLPNGNVT-LHTGDFRADPTMERSLLA-----GQKVHTLYLDTTYCSPEYSFPSQQEVIQFAVNTAFEAVTLNPRTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYKTLQ 923
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_007665881.1 (PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus anatinus] >XP_007665882.1 PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus anatinus] >XP_001513453.2 PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus anatinus]) HSP 1 Score: 194.5 bits (493), Expect = 9.300e-46 Identity = 102/212 (48.11%), Postives = 137/212 (64.62%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTS-PKCSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + + C+AYFLTH+HSDHY GL F+ I+C++ITG L+ KL ++ Q++H+LPM+ + G++V LLDANHCPGAVML+F+L N ILHTGDFRA M + + G+KI +YLDTTYC+ +Y+FPSQ V+ + A P TL GTYSIGKE+ A+AE +GSKV + K +TLR Sbjct: 670 KKIPGTGFTVDAFQYGAIDDCTAYFLTHFHSDHYGGLSKKFTY-PIYCNKITGNLVKSKLKVQEQYIHILPMDTVCIVNGIKVVLLDANHCPGAVMLLFYLPNGN-VILHTGDFRADPS----MKRYPKLIGQKIHMLYLDTTYCSPEYSFPSQQEVIQFAANTAFESINLNPHTLVICGTYSIGKEKVFIAIAEVLGSKVSMSQEKYKTLR 875
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_001926894.1 (DNA cross-link repair 1A protein [Sus scrofa] >XP_013839196.1 DNA cross-link repair 1A protein [Sus scrofa] >XP_013839197.1 DNA cross-link repair 1A protein [Sus scrofa] >XP_013839198.1 DNA cross-link repair 1A protein [Sus scrofa] >XP_020928989.1 DNA cross-link repair 1A protein [Sus scrofa]) HSP 1 Score: 194.1 bits (492), Expect = 1.200e-45 Identity = 102/212 (48.11%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGF-TSPKCSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + C+AYFLTH+HSDHY GL +F+ ++CSE+TG LL KL ++ Q++H LP++ + GV+V LLDANHCPGAVM++FHL + ILHTGDFRA + + A G+K+ T+YLDTTYC+ +Y+FPSQ V+ A P TL GTYSIGKE+ A+A+ +GSKV K K TLR Sbjct: 723 KKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLFHLPNGH-VILHTGDFRADPTMERSLLA-----GQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLR 927
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_008828437.1 (PREDICTED: DNA cross-link repair 1A protein [Nannospalax galili] >XP_017652905.1 PREDICTED: DNA cross-link repair 1A protein [Nannospalax galili]) HSP 1 Score: 194.1 bits (492), Expect = 1.200e-45 Identity = 100/212 (47.17%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + + C+AYFLTH+HSDHY GL +F+ ++CSEITG+LL KL ++ Q++H LPM+ ++GV+V LLDANHCPGA M++FHL +LHTGDFRA + + A GRKI T+YLDTTYC+ +Y+FPSQ V+ A P L GTY IGKE+ A+A+ +GSKV + K +TL+ Sbjct: 715 KKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKNFTL-PVYCSEITGSLLKNKLRVQEQYIHQLPMDTECVVDGVKVVLLDANHCPGAAMILFHLPN-GAVVLHTGDFRADPSMERSLLA-----GRKIHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQ 919
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_004680481.1 (PREDICTED: DNA cross-link repair 1A protein [Condylura cristata]) HSP 1 Score: 193.4 bits (490), Expect = 2.100e-45 Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + + C+AYFLTH+HSDHY GL F+ I+CSEITG LL KL ++ Q++H LPM+ T+ G+ V LLDANHCPGAVM++F+L N ILHTGDFRA + A G+K+ T+YLDTTYC+ +Y+FPSQ V+ A P L GTYSIGKE+ A+A+ +GSKV + K +TL+ Sbjct: 694 KKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKHFTL-PIYCSEITGNLLKSKLHVQEQYIHPLPMDTACTVNGINVVLLDANHCPGAVMILFYLPNGN-VILHTGDFRADPSMERSFLA-----GQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQ 898
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_004763881.1 (PREDICTED: DNA cross-link repair 1A protein [Mustela putorius furo] >XP_004763882.1 PREDICTED: DNA cross-link repair 1A protein [Mustela putorius furo]) HSP 1 Score: 193.4 bits (490), Expect = 2.100e-45 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + + C+AYFLTH+HSDHY GL +F+ I+CSEITG LL KL I+ Q++H LPM+ + G++V LLDANHCPGAVM++FHL N +LHTGDFRA + R G+KI T+YLDTTYC+ +Y+FPSQ V+ A P L GTYSIGKE+ A+A+ +GSKV + K +TL+ Sbjct: 719 KKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFT-FPIYCSEITGNLLKSKLHIQKQYIHPLPMDTECIVNGIKVVLLDANHCPGAVMILFHLPNGN-VLLHTGDFRADPTMERS-----RLAGQKIHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLIVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQ 923
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_015350306.1 (PREDICTED: DNA cross-link repair 1A protein [Marmota marmota marmota]) HSP 1 Score: 193.4 bits (490), Expect = 2.100e-45 Identity = 104/212 (49.06%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGF-TSPKCSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GTSF VD F + C+AYFLTH+HSDHY GL +F+ ++CSEITG LL KL ++ Q+VH LPM+ ++GV V LLDANHCPGA M++F+L +LHTGDFRA + + A G+KI T+YLDTTYC+ +YTFPSQ V+ A P TL GTYSIGKE+ AVA+ +GSKV + K +TL+ Sbjct: 709 KKIPGTSFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGNLLKSKLHVQEQYVHPLPMDTECFVDGVRVVLLDANHCPGATMILFYLPN-GAAVLHTGDFRADPSMERSLLA-----GQKIHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRTLVVCGTYSIGKEKVFLAVADVLGSKVGMSREKFQTLQ 913
BLAST of NO26G00100 vs. NCBI_GenBank
Match: XP_019502227.1 (PREDICTED: DNA cross-link repair 1A protein isoform X2 [Hipposideros armiger]) HSP 1 Score: 193.0 bits (489), Expect = 2.700e-45 Identity = 101/212 (47.64%), Postives = 138/212 (65.09%), Query Frame = 0 Query: 9 KWVEGTSFLVDGFGFTSPK-CSAYFLTHYHSDHYWGLRPSFSKGTIFCSEITGALLIGKLGIKPQFVHMLPMERPTTIEGVEVTLLDANHCPGAVMLVFHLKRANKTILHTGDFRASDGLRARMTAWLRARGRKIDTVYLDTTYCNHKYTFPSQASVLASLSLLARREKEAAPSTLFYVGTYSIGKERAVRAVAEGIGSKVYADKHKERTLR 220 K + GT F VD F + S + C+AYFLTH+HSDHY GL +F+ ++CSEITG LL KL ++ Q++H LP++ + GV+V LLDANHCPGAVM++F+L+ N +LHTGDFRA + + A G++I T+YLDTTYC+ +Y+FPSQ V+ A P TL GTYSIGKE+ A+A+ +GSKV K +TL+ Sbjct: 720 KKIPGTGFTVDAFQYGSVEGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGNLLKRKLHVQEQYIHPLPVDTECVVNGVKVVLLDANHCPGAVMILFYLRDGN-VVLHTGDFRADPSMERSLLA-----GQRIHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRTLVVCGTYSIGKEKVFLAIADVLGSKVGMSPEKYKTLQ 924 The following BLAST results are available for this feature:
BLAST of NO26G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00100 ID=NO26G00100|Name=NO26G00100|organism=Nannochloropsis oceanica|type=gene|length=3732bpback to top protein sequence of NO26G00100.4 >NO26G00100.4-protein ID=NO26G00100.4-protein|Name=NO26G00100.4|organism=Nannochloropsis oceanica|type=polypeptide|length=492bpback to top protein sequence of NO26G00100.3 >NO26G00100.3-protein ID=NO26G00100.3-protein|Name=NO26G00100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=519bpback to top protein sequence of NO26G00100.2 >NO26G00100.2-protein ID=NO26G00100.2-protein|Name=NO26G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=492bpback to top protein sequence of NO26G00100.1 >NO26G00100.1-protein ID=NO26G00100.1-protein|Name=NO26G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bpback to top Synonyms
Publications
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