NO25G02130, NO25G02130 (gene) Nannochloropsis oceanica

Overview
NameNO25G02130
Unique NameNO25G02130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2464
Alignment locationchr25:682270..684733 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:682270..684733 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 78.6 bits (192), Expect = 2.100e-11
Identity = 61/164 (37.20%), Postives = 76/164 (46.34%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVKXXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ E+               A                                ++QL FTQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   19 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIA----------RVEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEE 172
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 78.6 bits (192), Expect = 2.100e-11
Identity = 81/168 (48.21%), Postives = 99/168 (58.93%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK----XXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ EI+ ++         XXXX   XXXXXXXXXXXXXXXXX               ++QL +TQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   37 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEE 204
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 77.8 bits (190), Expect = 3.600e-11
Identity = 98/168 (58.33%), Postives = 116/168 (69.05%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK----XXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT +     K++A   Q +G VLGVA  TAV V   DQ EI+ V+    XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++QL +TQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   19 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEE 186
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 77.8 bits (190), Expect = 3.600e-11
Identity = 63/173 (36.42%), Postives = 78/173 (45.09%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQ---------GEIERVKXXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ          E+ER K                                            ++QL FTQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   83 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKYAEVERFK-------------------------------------------REVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEE 212
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 77.0 bits (188), Expect = 6.100e-11
Identity = 98/168 (58.33%), Postives = 116/168 (69.05%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK----XXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT +     K++A   Q +G VLGVA  TAV V   DQ EI+ V+    XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++QL +TQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:  100 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEE 267
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana])

HSP 1 Score: 73.2 bits (178), Expect = 8.800e-10
Identity = 102/186 (54.84%), Postives = 118/186 (63.44%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK----------------------XXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ EI+ V+                      XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++QL FTQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   80 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEE 265
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 72.4 bits (176), Expect = 1.500e-9
Identity = 101/186 (54.30%), Postives = 118/186 (63.44%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK----------------------XXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G V+GVA  TAV V   DQ EI+ V+                      XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++QL FTQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   19 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEE 204
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 72.0 bits (175), Expect = 2.000e-9
Identity = 84/179 (46.93%), Postives = 99/179 (55.31%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQ---------------GEIERVKXXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ                EI    XXXXXXXXX   X  XXXXXXXXXXXXXX               ++QL +TQD++PYQAA  +  K+RGG+ G +++E+
Sbjct:   19 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEE 197
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 69.7 bits (169), Expect = 9.700e-9
Identity = 45/85 (52.94%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVK 86
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ EI+ V+
Sbjct:   19 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQ 103
[Close]
BLAST of NO25G02130 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 69.7 bits (169), Expect = 9.700e-9
Identity = 88/183 (48.09%), Postives = 102/183 (55.74%), Query Frame = 0 
Query:    1 MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQGEI-------------------ERVKXXXXXXXXXRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLQLRFTQDFKPYQAAKEEANKERGGSRGRQKEEK 165
            ML     KAGAMARR   L G GKGR LRG F ST  TG GT S     K++A   Q +G VLGVA  TAV V   DQ E+                       XXXXXXXXX   XXXXXXXXXXXXXXXXXXX             ++QL FTQD++PYQAA  +  K RGG+ G +++E+
Sbjct:   79 MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEE 261
The following BLAST results are available for this feature:
BLAST of NO25G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14
Match NameE-valueIdentityDescription
EWM20057.12.100e-1137.20hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20145.12.100e-1148.21hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM19993.13.600e-1158.33hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20114.13.600e-1136.42hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20066.16.100e-1158.33hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM20054.18.800e-1054.84hypothetical protein Naga_102018g1 [Nannochloropsi... [more]
EWM20041.11.500e-954.30hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20009.12.000e-946.93hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20019.19.700e-952.94hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20060.19.700e-948.09hypothetical protein Naga_101993g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G02130.1NO25G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|221734gene_8843Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G02130.1NO25G02130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G02130 ID=NO25G02130|Name=NO25G02130|organism=Nannochloropsis oceanica|type=gene|length=2464bp
CATCAGCCACGACCACCAGAGGGACAGCATGCTTAGCAGCCTGGCTACGA
AGGCAGGAGCCATGGCGAGGAGACGCGGCGCGCTTTTCGGCACAGgtaag
gtggcttgtgtagatgcaccttggggaggagggtttgttggtggccgtgg
ggagggacgttcggtgcacgcgactgcctcctgcccgcggtatgtagatc
cattttcgtcggcctacctgccctgtatgcgtttcaatctttgctgtgtg
gacaagaggccgcgcaaggtgttgacgcacaagcacatccatacacgcca
acagggaagggacgcgggctgcggggggcgttcctctcgacacttcaaac
ggggacggggacagacagtaggggggggtccgcgaaggagtacgcggtag
gactccagatcgttggtggggtgctaggggtcgctagctttaccgccgtg
gccgtccatcgtctcgaccagcgggagatcaagcgtgtggagggcgagcg
agcggtggagctgaaattggcagcggcggagatcaagcgtgtggagggtg
agcgaaggttgtccgaggagcgtctgagggcggaggtggaccgatataaa
tacgatctacaacttaggttcacccaagacttcaaaccgtatcaagccgc
aaaggaggaggcaaacaaagagagaggaggatcaagagggcggcaaaagg
aagaggagacggagtagtttttcaaacttaagagtgtagctgtacaaaaa
tatgtaaaagacacaccaaagacatgtacagtggccggggatataaggaa
gaggtggggacgggactgaacaaaaatgtcgaaaggagggctcttaaaat
gtttcgaccgtggtgcgttccttctttctctcttttgattctctggtcat
ttctttaatctctgccgcactactgctgccagctactcatccaacttatc
aagatccgccgcttgtcatgaggggctcgtgcagacttggtggggacgag
gggaggcctaaaatgagagcaggcagggagtcaaggaacgatagcaaata
ctttgaaacccggaggaaagccaccagaggggcgtgctttagatgacaaa
atgttgttggtaatgcctcagttttttatggacccggggctgtggaccca
gcagccagccttggctgcttgtctcccttgccctcttctgttgagcggcc
ttacagtcaataccaccaacgctacagccacccgtgtaggtttgtcgcat
cgctctcgtccttgtgcaggggactgtgtcagtgtctggtatcgtagtgg
tggatgtgggttttgcctttctccttctttgctacgtgcacatcatcgtg
cacggcaatcctcctccctcttttggtcttgcccgttggcacactaggca
gtgcgcacccgcgccgccaccattttgtggtgtagcacgcattttgcgaa
gacgtctatctggtacccgagctggtgtggttcggaatagctttgttgta
cgcttggaaaccgacctcaaacactcacttgccctccctccctcccacac
acaacaacctgcactgctgcttgctttgctgctcgctgccaccatcagcc
acgaccaccagagggacagcatgcttagcagcctggctacgaaggcagga
gccatggcgaggagacgcggcgcgcttttcggcacaggtaaggtggcttg
tgtagatgcaccttggggaggagggtttgttggtggccgtggggagggac
gttcggtgcacgcgactgcctcctgcccgcggtatgtagatccattttcg
tcggcctacctgccctgtatgcgtttcaatctttgctgtgtggacaagag
gccgcgcaaggtgttgacgcacaagcacatccatacacgccaacagGGAA
GGGACGCGGGCTGCGGGGGGCGTTCCTCTCGACACTTCAAACGGGGACGG
GGACAGACAGTAGGGGGGGGTCCGCGAAGGAGTACGCGGTAGGCCTCCAG
ATCGTTGGTGGGGTACTAGGGGTCGCTAGCTTTACCGCCGTGGCCGTCCA
TCGTCTCGACCAGGGGGAGATCGAGCGTGTAAAAGGGGAGATCAAGCGTG
TGGAGGGCGAGCGAGCGGCGGAGCTTAAATTGGCAGCGGCGGAGATCAAG
CGTGTGGAGGGCGAGCGAAGGTTGTCCGAGGAGCGTCTGAGGGCGGAGGT
GGACCGATATAAATACGACCTACAACTTAGGTTCACCCAAGACTTCAAAC
CGTATCAAGCCGCAAAGGAGGAGGCAAACAAAGAGAGAGGAGGATCAAGA
GGGCGGCAAAAGGAAGAGAAGACGGAGTAGTTTTTCAAACTTAAGAGTGT
AGCTGTACAAAAATATGTAAAAGACACACCAAAGACATGTACAGTGGCCG
GGGATATAAGGAAGAGGTGGGGACGGGACTGAACAAAAATGTCGAAAGGA
GGGCTCTTAAAATG
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protein sequence of NO25G02130.1

>NO25G02130.1-protein ID=NO25G02130.1-protein|Name=NO25G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=167bp
MLSSLATKAGAMARRRGALFGTGKGRGLRGAFLSTLQTGTGTDSRGGSAK
EYAVGLQIVGGVLGVASFTAVAVHRLDQGEIERVKGEIKRVEGERAAELK
LAAAEIKRVEGERRLSEERLRAEVDRYKYDLQLRFTQDFKPYQAAKEEAN
KERGGSRGRQKEEKTE*
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Synonyms
Publications