NO25G01920, NO25G01920 (gene) Nannochloropsis oceanica

Overview
NameNO25G01920
Unique NameNO25G01920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3132
Alignment locationchr25:583687..586818 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:583687..586818 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006403NSK006403Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01920.1NO25G01920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01920.1NO25G01920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01920 ID=NO25G01920|Name=NO25G01920|organism=Nannochloropsis oceanica|type=gene|length=3132bp
CGTCGGTGACTTTCTTTTCTTAGATTTGCATTCAGAGCTTCCTGGGAATG
GGGAGACAGGGAGATAAGAAGAAGTGAGGAGGATGGTCGAGCATCGAGCA
GTCGATCACCGCCAGACTTCCACACTTGTCTTCTTCTGTCGCCTCTTTTC
TTCCGTTGGTTGTCCTTTCTCTTCCTCCGCAGAGAAAAGTGTGTCCATAG
CCGAGAAGCCAACCTCCCCATGGGGGGAGGGTTGTTCATCCTTTCTCGCT
GTCGACGGACCTGGCCGGATATGGATCATGGCGGGCATCACATCGTCAAA
AGCACGTCCGTCACGCACAACCATTTCCCACACCCTCTTCTCACGCAATA
ACATGAGCAGCTAAGCAAGGATCGCAAGTAAACCCTGTCTTTGTGGGGCG
TCGCTGTATGTTTCATCGTGCTACAGCGACTGGAGCCTGATGCGTGCTGA
TGTCATCACAATCGGAACAAATATTTGACGTGTCTCCCCACCCTCCTTCT
GTTCTGGCCCCTGCCTCTGCACGCGCGCCCGCTGGCACCTTTTACCATGC
ACCACATACACAAACTCAAAGCCATTTCCATCACTTCTTGACACCTTTTC
CCTCCCTTGTCAGATCACCCCGCCTGGTCTTTAACAGCTCCCCCATCTCC
GGCGTATCTCAGATCCCAGCAGAGCCGAACATCGCGATAGGTCTGCACGA
GGCGACATGGCTACGACACTGTCCCCCCTCTACCTCCTCTTCCTGCTCCT
TTCCCTGGCTTCCACGATCCTCAGCACCATGGCCGATCAACAACAAGAGA
CAAGCGATTCCTCCTCCTCCTCTATTCGCTCCTCCATCCCCTCGTCGTAC
ACGCCGGCCCCAATCCTCCCTCCAGGCCACCTTCAAATGTTCGTCCTGGT
TAATAATGTGGACGTTCCCATCCAGGCCACCATAGTCTACAACTATACCG
ATgtacgttgatgcaaggatgggaatgggaaatacaaatggccggaatac
cacctcgtctaacgcctcccacctttcttccctcctttcctccttcctct
cctcccagCAAAAGTCCGACGCCCCCCAAGGCTTGGAGGGGCGCCATGAG
CCCGTGTCCTGGGCTGAGAATGTGTGGATGGGTGTGAAGGAAAGGCGAAT
GTTTGGGCTGGGACAACAGAAgtgagtctaaaattaggaggaagggaggg
aggaagggggaagggatggcgctctcgatttttgatgaaaaacagaagca
tcatgccacccaggagaagtatcctgccacccacgaccccttcatggagg
aataagccttcaaagtcctcacatcccttttcattctctctcccttcctc
cctcccatcgccccctcctccagGCAGGGCTTTTGGGAGGTAGTAAGCAT
GCACCTCGAGCCACTCTATCCCCGCTTTGACCTCCCTCGCCCTCTTCCCG
ATTCGGAGCCAGACGCCGCGACCGCCACTGCAAGTGGCGAAGGCACGGCT
TTGTCTCCACTTGAGGAGGAAGGCGGAAAGAAGGGGAGGGAGGAGGAGGG
GGGGAAGGAAGAAGCAGGCAGGGAGAGAGGGAGGGAAGGGGACAAGGTGG
CGGAGAGAGCGTTGCCTGTGGTTTACTCCTGTCCGTTTTCGTTCTTGTTG
AAGTCCGTCGATCCATCCCGACTGGCCACGAATCCCGTTCTCCTCGGGGT
TTTTGTAGATCGGCCAGGAGTGGAGGCACAGAGCGGGCGGGAGGGAGGGG
GGGAGGGAGGGGTCCTCATGGTTCCCGGGAATTCGCAGTCGAGGCGGGCG
GTGCTGGTGGTGCATGCCATGGACTCAAAAAAGGAGGAGATGGTGGAGGG
GCGGGCTATCATTAGCGCGGCGGCCAGgtgcgtggaagaaggagggaagg
aaggagggaggacggaaggccaggacggtggtcatccttcgccttattcc
gggtcacatgcaaagtcttaactcatggacttattcactttctttctctt
actccgctgccttctctctctttcttctcgccatcaaaaaccacagAGAC
CCCTCCCTCCAGCCCGCCCTGAGCCCTATCTCTGCTTCGACCACTATCAC
TACTTCTCCCAACGCTTCGTCTACTTCCTCCTCCTCCACCACCACCTCTC
CCCCTCCCCATATAATCGTCACCGATTCTTCTTCTGCAGTGCCCTCCTCC
TCCTCCTCTTCTGCATTCTCCTCCCCCTCCACCCCCATCACTACCTCCGC
ACCCCAAAGCGGCAGCAACAACAGCAACAACAACAGCAGCAGCAGCAGCA
ACAACAGCAGCAACAGCAGCAGCAACAACAACAGCAGCAACAACAGCAGC
AGCAGTACCTCTCTTCCTCCCTCTCCTCCCTCTCCCGGTGTCCAAGACCC
CAAGGCCCGCCCTCAGGAGCCCGAGAGCGAGTCCTCCCTCCCCCTCCCTC
CCTCCAACGTTCGCCCTGACGTTCCACAAGGCGCTCCGAAAGCCCCCCAG
GGGGGAACTCCAGTATCGACCATGACAACTCCCTTACCCCTCCCTCTGGT
CCATCCGCCTAATCCGTTAAACAATGGAGGAGGAGGAGGAGGAAGGGAGG
GAGTGAACGCCGGGGCCATGGTGGGCCCCAGAGTGGCTCCGCCGGTGACG
GCAGAGCAAGGGGGGGTGGATGAGCGACGAAGGAGGGAGGGAGGGGATAG
CGTGACGAGGCCGGAGAAGATGGTAAATGGTGCAGAGGGAGGGAAAGGGC
AAGGGCGATTGCTGCGGGGGGAGCGAGAGATATGATCTAAGAAGGAAGAG
AGAGGGGAGGAGGACGATGGGAAGGAATGGGAACGAAGATGGGAGGATGT
GTATATGCATGCTTGTTTGGAGCGAAGGACAGCGAATGGGCGAATAAAGG
AGTGAGTTGGCGAGTGAAGAGTGTGTTGGAGGTCTCAGTGTGTGTATGTA
TGGGTGTGTGGGTGGGTGTGGGTGAATTAGGCTATGTGCAACAACAAGCA
GTTGGGGTGCGTGAAATAGGAGAGGACAGCAGTGGTTTAAGGGAGGTGGT
TAAAGGGGGGAAGATATAGAAACGGCCACACAGCCGTCGGCTTTTTTCAT
GTGCATGTTTTTCTGTTAATAAATTAGTTCCA
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protein sequence of NO25G01920.1

>NO25G01920.1-protein ID=NO25G01920.1-protein|Name=NO25G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MATTLSPLYLLFLLLSLASTILSTMADQQQETSDSSSSSIRSSIPSSYTP
APILPPGHLQMFVLVNNVDVPIQATIVYNYTDQKSDAPQGLEGRHEPVSW
AENVWMGVKERRMFGLGQQKQGFWEVVSMHLEPLYPRFDLPRPLPDSEPD
AATATASGEGTALSPLEEEGGKKGREEEGGKEEAGRERGREGDKVAERAL
PVVYSCPFSFLLKSVDPSRLATNPVLLGVFVDRPGVEAQSGREGGGEGGV
LMVPGNSQSRRAVLVVHAMDSKKEEMVEGRAIISAAARDPSLQPALSPIS
ASTTITTSPNASSTSSSSTTTSPPPHIIVTDSSSAVPSSSSSSAFSSPST
PITTSAPQSGSNNSNNNSSSSSNNSSNSSSNNNSSNNSSSSTSLPPSPPS
PGVQDPKARPQEPESESSLPLPPSNVRPDVPQGAPKAPQGGTPVSTMTTP
LPLPLVHPPNPLNNGGGGGGREGVNAGAMVGPRVAPPVTAEQGGVDERRR
REGGDSVTRPEKMVNGAEGGKGQGRLLRGEREI*
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Synonyms
Publications