NO25G01860, NO25G01860 (gene) Nannochloropsis oceanica

Overview
NameNO25G01860
Unique NameNO25G01860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4008
Alignment locationchr25:555506..559513 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier (BOU / S-adenosylmethionine carrier)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:555506..559513 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Homology
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_005705724.1 (mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria] >EME29204.1 mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria])

HSP 1 Score: 205.7 bits (522), Expect = 3.100e-49
Identity = 111/286 (38.81%), Postives = 170/286 (59.44%), Query Frame = 0
Query:  176 VIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRL---------NVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDP-----TSYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVR 448
            V+   + HL++GAVARG+ V +++P+DTIK R+Q+    G+              + LY G+ S+L+GQ+PYGML +GSYE+YK  +   L R  S    ++AA++ D+TGS+WL PSE+VK ++Q+   G  +    A    +   G+  FYQGY G + RDIPFRA+QL  YE ++ W        +++  L   +       + G++SGSV++A+TTP DV+KTRL   P      +Y+  WDC  ++ Q EG++  + G+ PR  YIGPS A+FFV Y  ++
Sbjct:   55 VLYRARIHLLSGAVARGVSVFAMYPIDTIKTRLQLETSRGVANYWHSLRKALSKPKYLYWGVVSTLIGQVPYGMLTFGSYEIYKSWLTGSL-RASSRLVIVLAAIMGDLTGSLWLCPSEVVKSRLQA---GQYSNTLDAIRKIFMTQGLKGFYQGYVGQIARDIPFRAIQLLSYEELR-WRYRQWKKLSSIEDLSNIENL-----VIGLVSGSVTAAVTTPLDVLKTRLMTQPIGVSTIAYSSAWDCARQLVQHEGLQAFWKGLGPRVFYIGPSGAIFFVVYEGMK 330          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: GAX21499.1 (hypothetical protein FisN_4Hh561 [Fistulifera solaris])

HSP 1 Score: 185.3 bits (469), Expect = 4.300e-43
Identity = 111/286 (38.81%), Postives = 153/286 (53.50%), Query Frame = 0
Query:  172 TFGLVIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVW---LDDHLLTDATVARLPGSDRN------AWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTSYTGP-WDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVR 448
            +F  +I+  +  L+A A AR   + S++PVDT+K R+QM          ++ LY G+  SL+GQ+PYG+L +GSYE+YK  ++   P          +AVL D+TGS WL PSE++KQQ Q+   G   +   AF       GI   YQGY G + RD+PFR  QL  YE  K +   +       A+ + + G   N      A    + G I+GS S+AIT P D  KT L  D  +Y G    C  K+++ EGI G   GVVPR  YI PS A+FF+ Y  VR
Sbjct:   66 SFVSIIRDSRRDLLAAAAARCSSIFSMYPVDTLKTRLQM---EQANPFRLEGLYKGVAGSLIGQVPYGVLTFGSYEMYKKALLNKFPNTKPVLLYAFSAVLGDLTGSGWLCPSEVIKQQTQA---GMYKSTAEAFMGILRKKGIKGLYQGYFGGIARDVPFRVAQLTSYEVTKSFYLRIKSRRAKSASKS-VKGKSTNEKIQLDAAESAICGAIAGSFSAAITAPLDRFKTLLMTDSAAYGGTVLSCASKIWRDEGIAGFAKGVVPRVTYIAPSVAIFFIVYEQVR 344          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_005830286.1 (hypothetical protein GUITHDRAFT_163898 [Guillardia theta CCMP2712] >EKX43306.1 hypothetical protein GUITHDRAFT_163898 [Guillardia theta CCMP2712])

HSP 1 Score: 184.5 bits (467), Expect = 7.300e-43
Identity = 111/301 (36.88%), Postives = 159/301 (52.82%), Query Frame = 0
Query:  156 LAPVVKAVEGAGS--ALGTFGLVIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQA-LYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTSYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYMHRE 454
            L P   A  GA S     T  +     K HL+AG +ARG+ V +L PVD+IK ++Q+  K   +  N+    ++G  +++LGQ+PYGMLV+G+YE  K  +    P        + +AV+ D  G+IWL+PSEIVKQ+MQS   G      S   + +   GI  FY G+ G+L RD+PFRALQLP+YE  +          A      G         L G   G +++ +TTP DV+K+R+ V  +S          + Q+ G+RGL+SG   R  Y+G S A+FF+ Y  VR  M  E
Sbjct:   64 LNPATAAKVGAASMGVAKTTTIAALGWKQHLLAGGIARGVAVSTLFPVDSIKTKLQVGQKISWRLDNIGVEHFSGFRAAILGQIPYGMLVFGTYETMKAKVFARYPDAPKLPVFIASAVVGDSAGAIWLTPSEIVKQRMQS---GQAKDTLSVIRSIYGKSGIKGFYTGFSGMLARDLPFRALQLPLYEVARE------AYSAKYCAPKGKVIAPHEAMLVGASVGMLAAGVTTPLDVVKSRMMVGASSGQSVMQVVRNILQEGGVRGLFSGAPQRVGYLGLSNAIFFIMYEFVRGLMAGE 355          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: GAX24426.1 (hypothetical protein FisN_4Lh561 [Fistulifera solaris])

HSP 1 Score: 183.3 bits (464), Expect = 1.600e-42
Identity = 109/285 (38.25%), Postives = 147/285 (51.58%), Query Frame = 0
Query:  172 TFGLVIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVW--------LDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTSYTGP-WDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVR 448
            +F  +I+  +  LVA A AR   + S++PVDT+K R+QM          ++ LY G+  SL+GQ+PYG+L +GSYE+YK  +    P          +AVL D+TGS WL PSE++KQQ Q+   G   +   AF       GI   YQGY G + RD+PFR  QL  YE  K +        +                  +A    + G I+GS S+AIT P D  KT L  D  +Y G    C  K+++ EGI G   GVVPR  YI PS A+FF+ Y  VR
Sbjct:   66 SFVSIIRDSRRDLVAAAAARCSSIFSMYPVDTLKTRLQM---EQANPFRLEGLYKGVAGSLIGQVPYGVLTFGSYEMYKKALFNKFPNTKPVLLYAFSAVLGDLTGSGWLCPSEVIKQQTQA---GMYKSTAEAFLGILRKKGIKGLYQGYFGGIARDVPFRVAQLTSYEVTKSFYLRIKSRRVXXXXXXXXXXXXSEKIQLDAAESAICGAIAGSFSAAITAPLDRFKTLLMTDSAAYGGTVLSCASKIWRDEGIAGFAKGVVPRVTYIAPSVAIFFIVYEQVR 344          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: CBN76904.1 (Mitochondrial carrier protein, putative [Ectocarpus siliculosus])

HSP 1 Score: 176.0 bits (445), Expect = 2.600e-40
Identity = 117/326 (35.89%), Postives = 169/326 (51.84%), Query Frame = 0
Query:  160 VKAVEGAGSALG----------TFGLVIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDAT-VARLPGSDRNAWREG--------------------------LAGVISGSVSSAITTPFDVIKTRLQV-DPTSYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVR 448
            ++AV+ A    G          +FG  ++S + HL+A AVAR   + + +P+DTIK R+ + G+A     ++  +Y G+ SSL GQ+PYGML +G+YE+YK  ++E  P+L    T  +AAVL D+TGS+WL PSE+VK QMQ    G   TV  A  + +   G+  FYQG+ G + RD+PFRA+QL  YE ++  L        T VA   G D      G                          L G ++G++S+  T P DV++TRL V         W   +K        GL SG+  R  YIG S+A+FFV Y A++
Sbjct:   19 IQAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHL-GRAA-AATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQG---GLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLKTWRRRQHTGVATERGDDSGGVPVGRARGGVATAAAGDDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGXXXXXXXTWAAAIKA------GGLLSGLGTRVFYIGTSSAVFFVVYEAIK 333          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_002176746.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51209.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 175.6 bits (444), Expect = 3.400e-40
Identity = 104/257 (40.47%), Postives = 149/257 (57.98%), Query Frame = 0
Query:  198 LHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVK-VWL---DDHLLTDATVARLPGS------DRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTSYTGP-WDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAY 444
            ++P+DTIK R+QM  +A   RL    ++ G+  SL GQ+PYG+L +GSYE+YK  ++   P +       +AAV+ D+TGS WL PSE+VKQ+MQ+   G   +   A  + W + G+  FY+GY G + RD+PFR  QL  YE  K ++L      L  + +  R   S      + ++      G I G+ S+A+T P D IKT L  D  +Y G    C  K+ ++EGIRGL +GVVPR +YI PS  +FFVAY
Sbjct:    1 MYPMDTIKTRMQM-DQANPFRL--AGIFGGVGGSLAGQVPYGVLTFGSYEMYKKSLLSQFPEVKPIFMYALAAVMGDLTGSGWLCPSEVVKQRMQAGMHG---STKDAAVSIWRSKGLVGFYEGYFGGVARDVPFRVAQLTSYEMTKNLYLRLKGRKLEEEKSKTRKRKSTAENRMELSSVEAAACGAICGTFSAAVTAPLDRIKTLLMTDSAAYGGSVASCASKIVREEGIRGLMTGVVPRVIYIAPSVVIFFVAY 251          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_002294499.1 (mitochondrial carrier protein [Thalassiosira pseudonana CCMP1335] >EED88333.1 mitochondrial carrier protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 175.3 bits (443), Expect = 4.500e-40
Identity = 101/258 (39.15%), Postives = 147/258 (56.98%), Query Frame = 0
Query:  198 LHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVK-VWLDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTSYTG--PWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYMHR 453
            ++P+DTIK R+QM  + G     V+ LY+G+  SL+GQ+PYG+L +GSYE+YK  ++   P +       ++A+L DITGS WL PSE++KQQ+Q+   G+   +  A    W   G+  FYQG+ G L RD+PFR  QL  +E  K ++L      +     +  S   A    + G  +GS S+AIT P D IKT +  D T+  G     C  K+ + +GI GL++GV PR  YI PS  +FFV Y  V+  M +
Sbjct:    1 MYPIDTIKTRMQM--RQG-NAWRVKGLYSGVMGSLVGQVPYGVLTFGSYEIYKQSLLTRFPNVKPTFIYALSAILGDITGSGWLCPSEVMKQQLQAGIYGN---MGEAVRGIWKKSGLRGFYQGFTGGLARDVPFRVAQLTTFEVTKSIYLRAKRSNNKDNDSIALSPLEA---AICGAAAGSFSAAITNPLDRIKTLMMTDTTNAYGGSVVACASKILRDDGIGGLFAGVGPRVGYIAPSVCIFFVTYELVQQKMKK 249          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_005539042.1 (similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D] >BAM83006.1 similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 169.1 bits (427), Expect = 3.200e-38
Identity = 108/289 (37.37%), Postives = 155/289 (53.63%), Query Frame = 0
Query:  169 ALGTFGLVIQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGL-------QRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVE-GLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQS-----AAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDATVARLPGSDRNAWREGLA-GVISGSVSSAITTPFDVIKTRLQVDPTSYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAY 444
            A    G  + + +  L A AVAR      + P+DT+K R+Q    A L       + L     Y G+ S+L GQ+PYG L +G+YE YK  + E GL         ++AAVL D+TGS+WL+PSE++KQQ+Q+            TV+      W   GI  FY+GY G + RD+PFRA+QL ++E  +  L+ +     T             E LA G  +G +++A+TTP DVIKTRL  D T Y    D   ++ + +  R L+ G+VPR LYI PS+A+FF+ Y
Sbjct:  106 AFERLGSTLWTNRVSLAASAVARAASTVVMFPLDTLKTRLQSADTAALGPREALRKVLTQGHFYRGLGSTLFGQVPYGALTFGTYECYKQALEEWGL--ASRRLRWMLAAVLGDLTGSLWLTPSELIKQQLQNMHNTGTRAAQAATVWQVIGQNWRQYGIAGFYRGYSGQVARDVPFRAIQLLLFEDARERLERYRRRALTPL-----------ENLAVGAYAGCLTAAVTTPLDVIKTRLMTDRT-YRHAGDALWQLLRTQP-RALFRGIVPRVLYIAPSSAIFFIVY 379          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_008456740.1 (PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo] >XP_008456742.1 PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 1.300e-34
Identity = 95/280 (33.93%), Postives = 148/280 (52.86%), Query Frame = 0
Query:  177 IQSKKDHLVAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTS--YTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYMHRER 455
            ++S  +  +AG+VA  ++  +L+P+DTIK R+Q     G  ++ ++ LY+G+T +L+G +P   +  G YE  K  ++  LP   +    L A V+  +  SI   P+E+VKQ+MQ++     +    A     +  G    Y GYG  LLRD+PF A+Q  +YE++++             R P    NA    L G  SG+V+ AITTPFDVIKTRL V  ++  Y G  DC   + ++EG R    G+ PR L+IG   A+FF      +  +  +R
Sbjct:   37 VRSLYEGAIAGSVASFVIEAALYPIDTIKTRLQAVHGGG--KIVLKGLYSGLTGNLVGMLPATAIFVGVYEPTKQTLLNSLPENLNALAHLTAGVVGGVASSIIRVPTEVVKQRMQTSHFASASNAVQAIV---SREGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGY------KLAAQRDPNDPENA----LIGAFSGAVTGAITTPFDVIKTRLMVQGSNSQYQGIRDCCRTIMKEEGARAFLKGMGPRVLWIGLGGAIFFGVLEKTKQMLANQR 301          
BLAST of NO25G01860 vs. NCBI_GenBank
Match: XP_016902018.1 (PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo] >XP_016902019.1 PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 4.800e-34
Identity = 94/272 (34.56%), Postives = 144/272 (52.94%), Query Frame = 0
Query:  185 VAGAVARGLVVGSLHPVDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYKDMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKTTVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDHLLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPTS--YTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYMHRER 455
            +AG+VA  ++  +L+P+DTIK R+Q     G  ++ ++ LY+G+T +L+G +P   +  G YE  K  ++  LP   +    L A V+  +  SI   P+E+VKQ+MQ++     +    A     +  G    Y GYG  LLRD+PF A+Q  +YE++++             R P    NA    L G  SG+V+ AITTPFDVIKTRL V  ++  Y G  DC   + ++EG R    G+ PR L+IG   A+FF      +  +  +R
Sbjct:   28 IAGSVASFVIEAALYPIDTIKTRLQAVHGGG--KIVLKGLYSGLTGNLVGMLPATAIFVGVYEPTKQTLLNSLPENLNALAHLTAGVVGGVASSIIRVPTEVVKQRMQTSHFASASNAVQAIV---SREGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGY------KLAAQRDPNDPENA----LIGAFSGAVTGAITTPFDVIKTRLMVQGSNSQYQGIRDCCRTIMKEEGARAFLKGMGPRVLWIGLGGAIFFGVLEKTKQMLANQR 284          
The following BLAST results are available for this feature:
BLAST of NO25G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005705724.13.100e-4938.81mitochondrial carrier (BOU / S-adenosylmethionine ... [more]
GAX21499.14.300e-4338.81hypothetical protein FisN_4Hh561 [Fistulifera sola... [more]
XP_005830286.17.300e-4336.88hypothetical protein GUITHDRAFT_163898 [Guillardia... [more]
GAX24426.11.600e-4238.25hypothetical protein FisN_4Lh561 [Fistulifera sola... [more]
CBN76904.12.600e-4035.89Mitochondrial carrier protein, putative [Ectocarpu... [more]
XP_002176746.13.400e-4040.47predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002294499.14.500e-4039.15mitochondrial carrier protein [Thalassiosira pseud... [more]
XP_005539042.13.200e-3837.37similar to mitochondrial carrier protein [Cyanidio... [more]
XP_008456740.11.300e-3433.93PREDICTED: S-adenosylmethionine carrier 1, chlorop... [more]
XP_016902018.14.800e-3434.56PREDICTED: S-adenosylmethionine carrier 1, chlorop... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006393NSK006393Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01860.1NO25G01860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01860.2NO25G01860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|220327gene_8799Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01860.1NO25G01860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01860.2NO25G01860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01860 ID=NO25G01860|Name=NO25G01860|organism=Nannochloropsis oceanica|type=gene|length=4008bp
TCAGACGCCTACGATTGAAGATGTGCTTCATGGGCCACAAGAAGCCTCCA
ACGCTCATTCTTTTCTTCCTGCTGACCACCTCAAACTCAAGCCACATCGC
CCGTCTTCTCTGACACTGGCATGTTGATTATTCCGACTTCCTTTGCTTGT
ATTCACTGTGACCATCAATATGCGCCTTCCCACACAAGGCACTGTCAACG
TCATCTCAACCATCATCATCGGCATCAAGAGCCAGCGGCATCAGGAGCCA
GCGGCCTCTTCCTGAGCACTCAATGCGATGCCGTCAGGATCGCCGGTCAC
GCCGCACTTATTCCACTCCCGAGTTTGCGATGCTCTTGTTCCAAGTCAAG
TCTCCGTCCGTGTCGGAATGCTCTTGCATGGACACAAGGGTCTTGCGCAC
TCCGAATTTTCATTTCATGACACGCACACGTACACAGGGAGACTGATTTT
CTTGAGCGACATTAAACCGGCGCGTTTTACTCCGACGCAAAAGCTCCGTC
GGTGCTTGTCCGTGTGTGCCGTCTACCACTTAAAGCTGCTTTTCCTCGCC
AGCACAGAGTGCAGTGCGTCGTCAAGATGCATTCCTTAATCTTCCCGTCC
TCCCCTCCTTCTGCCAGTGATGCCTCGGCATGGAGGAAAAGACGACGGCA
GCAGCAGCAGCAGCAGCAGCAGCGGCAGCAATGGCATTCGGTCCTCTCCG
CTTCCATCCTCCTCCTCGTCGTCTTCCTGGGCGGGACGTGCTTGGCCGCT
ATACCCTCCGCCACGGCTGCCACAAGCACTGGTGGCACCGCTTGGGAATG
gtacgtaagaatgggttccgagaaggagagagggaaggagggaagggggg
gagggggggccgaaaacttgcccattgctgacttcccgccctattaaacc
ccgtcatgcttacatacatgtatatattatattctctatgcatgttcagG
CCCTCAAGATTTGTCGTCCAAGCCTCTTCTGCTGTGGACCGCTCCTCCTC
CTCCTCCTCCTCCTCCATGGTCACACCAAAACGGAAGTTTCTCTCCGCCC
TCCCCAAGCAGAAACAGAGCAACAGTGCCAACAGCCCAACCCCTGCGACT
GCAGTCTCTCTAGCCACCCCTGCTGCTTCCCCATCCTCAGCAACAGCAGC
AGCAGCAGTAGCAGCAGCAGCAGCAACAGCAGCAAATTGGCTGGCCCCAG
TGGTGAAGGCGGTGGAAGGGGCAGGAAGTGCCCTGGGGACGTTTGGGCTG
GTTATCCAGTCCAAGAAAGACCATCTGGTTGCCGGCGCGgtaagcaagga
gagaggcagtggaaattcagggaaggagtgaaggagggaggaaaggaaag
agggaaggaggaaggctggcaacatagtgacaaactcaggcatgtgagaa
ggcaaaactcacttccctccctccctccctccctccctccctccctccag
GTGGCCCGCGGCTTGGTGGTGGGGAGCTTGCATCCCGTGGACACGATCAA
GATCCGAGTGCAAATGTTCGGGAAGGCGGGCCTGCAGgtgggagggaggg
ggggagggacggacggacggacggacggacgggagaagggagagaggaag
ggtagggggcgccacattcaacgtcttcaccaccctaaaccaagacacgc
agtgcctgacaatcctccctccctccctccctcctctcctccctccttag
CGTCTGAATGTCCAAGCACTATACGCCGGCATCACCTCCTCCCTCTTGGG
GCAAATGCCCTATGGGATGCTTGTGTATGGCTCGTATGAAGTCTACAAGG
ACATGATCGTGGAAGGgtgaggagggagggagagagggaaggaaggagac
agggaaggagggagaaagcccacacccacccacacacacacacacacaca
cacacacacccacacccacccacacaccaacacacccacacacacacaca
cctctacagACTACCACGTCTGGGATCGGATGCCACCTCCCTTGTGGCTG
CCGTTCTCTCCGACATCACGGGCTCCATATGGCTTTCCCCCTCGGAAAgt
gagtccctccctctctctcttcctccttccctccctccctccttctctcc
cctcccatccccccttcctgccatataacctgtcgatactcatccctccc
ttcttccccctctccctccagTCGTCAAGCAACAGATGCAGTCGGCGGCG
GTGGGAGACAAAACGACCGTTTTCTCGGCCTTTGCCAACGCCTGGAACGC
GGGCGGAATCACGGCCTTCTACCAGGGTTATGGAGgtgaggagggaggga
gggagggagggagggaggaaggaaggaaggaaggaaggagaaaagatggg
acacagtcacataaattgcccgcggaaaacccactcaaaccgcgctttcc
cccccactccctcccttcctccccctccctccctcctttccactccccca
gGCCTCCTCCTCAGGGACATTCCGTTCCGAGCTTTACAGCTCCCTATGTA
CGAGCGGGTCAAGGTCTGGTTGGACGACCACCTTCTCACCGATGCCACCG
TCGCCCGCCTGCCCGGAAGCGACCGAAATGCGTGGAGGgtacgaaaaaca
ctccctctcttctcacccatccctccctctctgcctccctctctgcctct
atgcccaccgtctccgtcttcgtcctcatcctcctctctgcgttctgcca
agacctatactcaccctcgctccctccctccctcccttcctccttccctc
cctccccctttacagGAAGGGCTCGCTGGCGTTATCTCCGGCTCTGTCTC
CAGCGCTATCACCACCCCCTTCGACGTGATCAAGACACGGCTGCAGGTTG
ATCCGACTTCCTACACTGGCCCCTGGGACTGCGGCGTCAAGGTCTTCCAG
AAGgtgcgtccctccctccctccctccctccctccctccctccctcccct
gcacccagctatcaatctcacattcctcttcaactcaatccctccctccc
tccctccctccctccctcgtgacagGAAGGGATCAGGGGGCTCTACTCGG
GCGTGGTGCCTCGCACCCTCTACATCGGGCCGTCGACAGCGCTCTTCTTT
GTCGCATATGGCGCAGTGCGTTCGTACATGCATCGGGAGAGgtagggagg
gagcgaaggagcgagagcagggagacagggaagggagggaggaagggagg
gaggaagggagggaggattcgctgacgcacccccttttcccctctttatc
acacagCCAAAATCCTGCTAGCATCCTCCAGACTAGCAGCATCAAGAAGG
AGAACACCAAAAGCAGCAGCAGCAGGAGCAAGAGCAGCAGCAACGAGGCG
CCCCATGTGGCCCCTCGTGCCCCTCACTCCTTCTCTCTTCCCGAGCGGCC
ATTCCAAGGAGGGCTGCAGTTCCTCTCCCTCCCATCCTCGCTCCCTTTTT
CCCTCCTCCAGAAACGTCCGCGGGAGGATCGGTTGGAGAATCATCAGCAC
CTGCAGCAGCTGTTGAAAAAAAAGAAGGAGCACAAGTGATATGAAGGAGC
ACAAGTAATAAGAAGACGGAGGAAGGGAATGAAGGCTTGTAAGATAGAGA
CAGGGCAGTCGGCGACGAGCATTGACAACGAGCTCCTGGAGTACAAAGTT
TTAAGAGATGAGCGAGGGGTGCCGCAGAGATCAAAAGCACGGCGAGTACC
GGAGAGGCAGAGACATGGGCGATAGGGGTAAGCGAGAGGAAGGACGGGAG
GTGTCGTCGTCGCTCTCGCGCCAATTTCCTGTCCGGTTTCCTCAGGCACG
CGGGATGGTGGGTGACGGGAGGGTCGGATGATGTTGAGGACGACTTCGAA
AGCAACCAGAGGCCGACATGTGACCAGGGCAAGAGCCGACAGGCACAGGG
AGGCACGATATGAATCTTTATATTATTTTTTGTAAGGAAAACACATAAAG
AAGAAACAAATAGAGGGGAAGTTTTTAATAAAAGAAGACCATGAATGAGA
AACCGAAA
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protein sequence of NO25G01860.1

>NO25G01860.1-protein ID=NO25G01860.1-protein|Name=NO25G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=548bp
MHSLIFPSSPPSASDASAWRKRRRQQQQQQQQRQQWHSVLSASILLLVVF
LGGTCLAAIPSATAATSTGGTAWEWPSRFVVQASSAVDRSSSSSSSSMVT
PKRKFLSALPKQKQSNSANSPTPATAVSLATPAASPSSATAAAAVAAAAA
TAANWLAPVVKAVEGAGSALGTFGLVIQSKKDHLVAGAVARGLVVGSLHP
VDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYK
DMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKT
TVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDH
LLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPT
SYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYM
HRESQNPASILQTSSIKKENTKSSSSRSKSSSNEAPHVAPRAPHSFSLPE
RPFQGGLQFLSLPSSLPFSLLQKRPREDRLENHQHLQQLLKKKKEHK*
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protein sequence of NO25G01860.2

>NO25G01860.2-protein ID=NO25G01860.2-protein|Name=NO25G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=455bp
MHSLIFPSSPPSASDASAWRKRRRQQQQQQQQRQQWHSVLSASILLLVVF
LGGTCLAAIPSATAATSTGGTAWEWPSRFVVQASSAVDRSSSSSSSSMVT
PKRKFLSALPKQKQSNSANSPTPATAVSLATPAASPSSATAAAAVAAAAA
TAANWLAPVVKAVEGAGSALGTFGLVIQSKKDHLVAGAVARGLVVGSLHP
VDTIKIRVQMFGKAGLQRLNVQALYAGITSSLLGQMPYGMLVYGSYEVYK
DMIVEGLPRLGSDATSLVAAVLSDITGSIWLSPSEIVKQQMQSAAVGDKT
TVFSAFANAWNAGGITAFYQGYGGLLLRDIPFRALQLPMYERVKVWLDDH
LLTDATVARLPGSDRNAWREGLAGVISGSVSSAITTPFDVIKTRLQVDPT
SYTGPWDCGVKVFQKEGIRGLYSGVVPRTLYIGPSTALFFVAYGAVRSYM
HRER*
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