NO25G01850, NO25G01850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01850 vs. NCBI_GenBank
Match: EWM21695.1 (phytanoyl- dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 329.7 bits (844), Expect = 9.600e-87 Identity = 155/206 (75.24%), Postives = 178/206 (86.41%), Query Frame = 0 Query: 1 MEGAAVIPLFPSSEDGAARRQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQ-NNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMAGRD 206 M+ +PL PS +DGAARRQ Y I+ +DK+ +L +GYIRLPGVLTEEE +LE VFDAF+EGK+ VPGKDFCDMSQ FG+PF WRLVNAMLPREY P+LQ +NVLEARA SIAQQLLG+DMALDYDQFL KRPSRDG+ANGA+FAWHQDQAYWPQ TPD+RTVTVSLALNEA+ +NGCLRVVPGSH+E KLR HRP++AGRD Sbjct: 1 MKDLEELPLIPSRDDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRD 206
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_054123333.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. AAP93] >KPF79588.1 hypothetical protein IP83_16635 [Novosphingobium sp. AAP93]) HSP 1 Score: 286.6 bits (732), Expect = 9.300e-74 Identity = 141/272 (51.84%), Postives = 191/272 (70.22%), Query Frame = 0 Query: 20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 RQ Y +S ++ E + DGY+ L GVL+EEE+ +E F+ FI G++ G+DFCDMS +G F D+ LVNA+LPR Y P +++N+ E RA SI++QL+GE LDYDQFL KRP++ A+F WHQD YWP TP+ T T SLAL++A ++NGCLRVVPGSH++ LR HRP+M R+ +H L+V+L D V+ LPLRRGD+TVHDE I+HGS GN+S R+TY+ AFR+KA + ERA+GFTHSHN NW++ + + T Sbjct: 6 RQGDDYILSPEEIEQFHRDGYVTLRGVLSEEELAAIEPEFERFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIRDNLFERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHRKG-LRPHRPLMGEDREKSHILSVELTADDPVVELPLRRGDITVHDEMIIHGSGGNSSPDRWRRTYIAAFRTKACVDFERAIGFTHSHNDTINWETHLGALT 272
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_072383954.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. NDB2Meth1]) HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72 Identity = 138/267 (51.69%), Postives = 187/267 (70.04%), Query Frame = 0 Query: 25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 Y +S + E + DGY+ L GVL+E E+ +E FD FI G++ G+DFCDMS +G F D+ LVNA+LPR Y P +++N+ E RA SI++QL+GE LDYDQFL KRP++ A+F WHQD YWP TP+ T T SLAL++A ++NGCLRVVPGSH++ LR HRP+M R+ +H L+V+L D V+ LPL+RGD+TVHDE I+HGS GN+S R+TY+ AFR+KA + ERA+GFTHSHN NW++ + + T Sbjct: 11 YILSPDEIEQFHRDGYVTLRGVLSEGELAAIEPEFDRFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIRDNLFERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHRKG-LRPHRPLMGEDREKSHILSVELTADDPVVELPLQRGDITVHDEMIIHGSGGNSSPDRWRRTYIAAFRTKACVDFERAIGFTHSHNDTINWETHLGALT 272
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_052242506.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium subterraneum] >KHS44940.1 phytanoyl-CoA dioxygenase [Novosphingobium subterraneum]) HSP 1 Score: 275.0 bits (702), Expect = 2.800e-70 Identity = 139/272 (51.10%), Postives = 188/272 (69.12%), Query Frame = 0 Query: 20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 RQ Y ++ ++ + DGYI L GV+TEEE+ LE+ F+ FI G++ GKDFCDMS + F ++ LVNA+LPR Y P+L++N+ E RA SI++QL+GE LDYDQFL KRP++ A+F HQD YWP TP+ T T SLAL++A +NGCL+VVPGS K+ LR HRP+M R +H L+V+L D V+ LPL+RGD+TVHDE IVHGS GNTS R+TY++AFRSKA + ER++GFTHSHN W++ +++ T Sbjct: 7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVRGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSKSHILSVELNDADMVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_062346911.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. CCH12-A3]) HSP 1 Score: 275.0 bits (702), Expect = 2.800e-70 Identity = 139/272 (51.10%), Postives = 189/272 (69.49%), Query Frame = 0 Query: 20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 RQ Y ++ ++ + DGYI L GV+TEEE+ LE+ F+ FI G+++ GKDFCDMS + F ++ LVNA+LPR Y P+L++N+ E RA SI++QL+GE LDYDQFL KRP++ A+F HQD YWP TP+ T T SLAL++A +NGCL+VVPGS K+ LR HRP+M R +H L+V+L D V+ LPL+RGD+TVHDE IVHGS GNTS R+TY++AFRSKA + ER++GFTHSHN W++ +++ T Sbjct: 7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVSGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSKSHILSVELTDADMVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_011444442.1 (MULTISPECIES: phytanoyl-CoA dioxygenase family protein [Novosphingobium] >ABD25228.1 Phytanoyl-CoA dioxygenase [Novosphingobium aromaticivorans DSM 12444] >SCX87315.1 Phytanoyl-CoA dioxygenase (PhyH) [Novosphingobium stygium]) HSP 1 Score: 272.3 bits (695), Expect = 1.800e-69 Identity = 137/272 (50.37%), Postives = 187/272 (68.75%), Query Frame = 0 Query: 20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 RQ Y ++ ++ + DGYI L V+TE+E+ LE+ F+ FI G++ GKDFCDMS + F ++ LVNA+LPR Y P L++N+ E RA SI++QL+GE LDYDQFL KRP++ A+F HQD YWP TP+ T T SLAL++A +NGCL+VVPGS K+ LR HRP+M R D+H L+V++ D V+ LPL+RGD+TVHDE IVHGS GNTS R+TY++AFRSKA + ER++GFTHSHN W++ +++ T Sbjct: 7 RQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_084277566.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. B1] >SMC37392.1 Phytanoyl-CoA dioxygenase (PhyH) [Novosphingobium sp. B1]) HSP 1 Score: 272.3 bits (695), Expect = 1.800e-69 Identity = 136/267 (50.94%), Postives = 185/267 (69.29%), Query Frame = 0 Query: 25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291 Y ++ ++ + DGYI L GV+TE+E+ LE F+ FI G+++ GKDFCDMS + F ++ LVNA+LPR Y P L++N+ E RA SI++QLLGE LDYDQFL KRP++ A+F HQD YWP TP+ T T SLAL++A +NGCL+VVPGS K+ LR HRP++ R ++H L+V+L D V+ LPL+RGD+TVHDE IVHGS GNTS R+TY++AFRSKA + ER++GFTHSHN W++ + + T Sbjct: 12 YILTPEEIAQFHRDGYITLRGVMTEDELAPLEPEFERFIRGEVSGMGKDFCDMSGPYDREFENFSLVNAVLPRHYEPTLRDNLYERRAASISRQLLGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADLENGCLKVVPGSQKQG-LRPHRPLLGEDRSNSHILSVELTDADTVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVEFERSIGFTHSHNDTITWETHLGALT 273
BLAST of NO25G01850 vs. NCBI_GenBank
Match: PHR87695.1 (phytanoyl-CoA dioxygenase [Blastopirellula sp.]) HSP 1 Score: 265.8 bits (678), Expect = 1.700e-67 Identity = 138/277 (49.82%), Postives = 184/277 (66.43%), Query Frame = 0 Query: 19 RRQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGE-DMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPV-------MAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWIS 288 RRQ Y I+ ++ + Y + GYI L LTE E+ L+ F+ F+ GK+ KDFCDMSQ +G P ++RLVNAMLP Y AL+N+ + A S+ QL E +DYDQFL K+P +D GA F+ HQD YWP+ T D T TVSLAL ++ +NGCL+V+PG+++E +LR H PV RD++H L ++ + D +YLP++RG VT+HDERI+HGS GNTS N RKTYV+AFRSK T+A ERAMGFTHSHN +WD++IS Sbjct: 23 RRQGQRYLITSEEVQKYHDQGYIVLEEFLTESEMALLDEKFEEFVAGKVEGMEKDFCDMSQPYGTPIEEFRLVNAMLPSHYSDALKNSAYQQVAQSVVDQLRPEVPSVMDYDQFLAKKPEKD----GARFSMHQDLGYWPK-TDDTWTATVSLALTDSGLENGCLQVIPGTNRELELRSHSPVNFADGNSAGSRDESHTLVIESRESDAPVYLPVKRGSVTIHDERIIHGSAGNTSD-NWRKTYVMAFRSKQTVAEERAMGFTHSHNDVVDWDTFIS 293
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_013424570.1 (phytanoyl-CoA dioxygenase family protein [Frankia inefficax] >ADP81452.1 Phytanoyl-CoA dioxygenase [Frankia inefficax]) HSP 1 Score: 265.4 bits (677), Expect = 2.200e-67 Identity = 128/259 (49.42%), Postives = 174/259 (67.18%), Query Frame = 0 Query: 23 GAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETN 282 G Y + +D+ + DG++ L GVLT EV ELE V+D F+ ++ VPGKD+CDM+ +G D+ +VN MLPR Y PA ++NV E R IA+QL G+ M +DYDQ L K+P + A+FAWHQD AYWP T D RT T+ LA++E+T NGC+R VP + E +LR H PV GR ++HAL +L GD V+ P+ RGD TVH+ER++HGS GN ST R+ Y++A+RS+AT+ ER +GFTHSHN E + Sbjct: 8 GRYVVDAEDRRRFAEDGFVHLAGVLTAAEVDELEVVYDRFLRREIEVPGKDYCDMAGDYGRDPSDYSIVNVMLPRRYFPAWRDNVYERRTADIARQLCGDGMTIDYDQLLAKQPHK----TDAVFAWHQDMAYWP-PTEDRRTATLWLAVDESTLANGCMRFVPATTHEAQLRAHAPVFGGRGESHALGTELRPGDDVVPTPIGRGDCTVHNERVMHGSGGN-STDGFRRAYILAYRSEATVRIERDLGFTHSHNDEAD 260
BLAST of NO25G01850 vs. NCBI_GenBank
Match: OFC70328.1 (hypothetical protein BFC18_14230 [Alteromonas confluentis]) HSP 1 Score: 265.4 bits (677), Expect = 2.200e-67 Identity = 134/268 (50.00%), Postives = 180/268 (67.16%), Query Frame = 0 Query: 25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPV----MAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISS 289 Y +S ++K Y +GYI L VLT+ E+ +E F+ FI GK+ G+DFCDMS + F D+ LVNAMLPR+Y P + NN+ E + SI++QL+G+D LDYDQFL KRP+R A F HQD YWP TPD T T SLA+++A ++NGCL V+PGSHK+ LR H+PV A RD +H L V+L G+ ++ LPL RGD+TVH+E I+HGS GN S + R+TY+ AFRSKA + ER +GFTHSHN + NW + + + Sbjct: 13 YIVSSEEKLAYEKNGYITLRNVLTDAEIEGIERDFEYFITGKVPGMGRDFCDMSGPYDRKFEDFALVNAMLPRKYKPDVANNIYEKLSASISRQLIGDDATLDYDQFLAKRPNRP----DAKFTLHQDLGYWPTGTPDTITATCSLAVDDANSENGCLYVIPGSHKKG-LRVHKPVHGKSSADRDSSHILGVELLDGEALIELPLNRGDITVHNELILHGSGGNRSESSWRRTYITAFRSKACVEYERQIGFTHSHNDKVNWGTHLGA 275 The following BLAST results are available for this feature:
BLAST of NO25G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01850 ID=NO25G01850|Name=NO25G01850|organism=Nannochloropsis oceanica|type=gene|length=2505bpback to top protein sequence of NO25G01850.1 >NO25G01850.1-protein ID=NO25G01850.1-protein|Name=NO25G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=309bpback to top Synonyms
Publications
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