NO25G01850, NO25G01850 (gene) Nannochloropsis oceanica

Overview
NameNO25G01850
Unique NameNO25G01850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2505
Alignment locationchr25:552955..555459 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhytanoyl-dioxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:552955..555459 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO25G01850 vs. NCBI_GenBank
Match: EWM21695.1 (phytanoyl- dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 329.7 bits (844), Expect = 9.600e-87
Identity = 155/206 (75.24%), Postives = 178/206 (86.41%), Query Frame = 0
Query:    1 MEGAAVIPLFPSSEDGAARRQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQ-NNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMAGRD 206
            M+    +PL PS +DGAARRQ   Y I+ +DK+ +L +GYIRLPGVLTEEE  +LE VFDAF+EGK+ VPGKDFCDMSQ FG+PF  WRLVNAMLPREY P+LQ +NVLEARA SIAQQLLG+DMALDYDQFL KRPSRDG+ANGA+FAWHQDQAYWPQ TPD+RTVTVSLALNEA+ +NGCLRVVPGSH+E KLR HRP++AGRD
Sbjct:    1 MKDLEELPLIPSRDDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRD 206          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_054123333.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. AAP93] >KPF79588.1 hypothetical protein IP83_16635 [Novosphingobium sp. AAP93])

HSP 1 Score: 286.6 bits (732), Expect = 9.300e-74
Identity = 141/272 (51.84%), Postives = 191/272 (70.22%), Query Frame = 0
Query:   20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            RQ   Y +S ++ E +  DGY+ L GVL+EEE+  +E  F+ FI G++   G+DFCDMS  +G  F D+ LVNA+LPR Y P +++N+ E RA SI++QL+GE   LDYDQFL KRP++      A+F WHQD  YWP  TP+  T T SLAL++A ++NGCLRVVPGSH++  LR HRP+M   R+ +H L+V+L   D V+ LPLRRGD+TVHDE I+HGS GN+S    R+TY+ AFR+KA +  ERA+GFTHSHN   NW++ + + T
Sbjct:    6 RQGDDYILSPEEIEQFHRDGYVTLRGVLSEEELAAIEPEFERFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIRDNLFERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHRKG-LRPHRPLMGEDREKSHILSVELTADDPVVELPLRRGDITVHDEMIIHGSGGNSSPDRWRRTYIAAFRTKACVDFERAIGFTHSHNDTINWETHLGALT 272          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_072383954.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. NDB2Meth1])

HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72
Identity = 138/267 (51.69%), Postives = 187/267 (70.04%), Query Frame = 0
Query:   25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            Y +S  + E +  DGY+ L GVL+E E+  +E  FD FI G++   G+DFCDMS  +G  F D+ LVNA+LPR Y P +++N+ E RA SI++QL+GE   LDYDQFL KRP++      A+F WHQD  YWP  TP+  T T SLAL++A ++NGCLRVVPGSH++  LR HRP+M   R+ +H L+V+L   D V+ LPL+RGD+TVHDE I+HGS GN+S    R+TY+ AFR+KA +  ERA+GFTHSHN   NW++ + + T
Sbjct:   11 YILSPDEIEQFHRDGYVTLRGVLSEGELAAIEPEFDRFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIRDNLFERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHRKG-LRPHRPLMGEDREKSHILSVELTADDPVVELPLQRGDITVHDEMIIHGSGGNSSPDRWRRTYIAAFRTKACVDFERAIGFTHSHNDTINWETHLGALT 272          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_052242506.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium subterraneum] >KHS44940.1 phytanoyl-CoA dioxygenase [Novosphingobium subterraneum])

HSP 1 Score: 275.0 bits (702), Expect = 2.800e-70
Identity = 139/272 (51.10%), Postives = 188/272 (69.12%), Query Frame = 0
Query:   20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            RQ   Y ++ ++   +  DGYI L GV+TEEE+  LE+ F+ FI G++   GKDFCDMS  +   F ++ LVNA+LPR Y P+L++N+ E RA SI++QL+GE   LDYDQFL KRP++      A+F  HQD  YWP  TP+  T T SLAL++A  +NGCL+VVPGS K+  LR HRP+M   R  +H L+V+L   D V+ LPL+RGD+TVHDE IVHGS GNTS    R+TY++AFRSKA +  ER++GFTHSHN    W++ +++ T
Sbjct:    7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVRGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSKSHILSVELNDADMVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_062346911.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. CCH12-A3])

HSP 1 Score: 275.0 bits (702), Expect = 2.800e-70
Identity = 139/272 (51.10%), Postives = 189/272 (69.49%), Query Frame = 0
Query:   20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            RQ   Y ++ ++   +  DGYI L GV+TEEE+  LE+ F+ FI G+++  GKDFCDMS  +   F ++ LVNA+LPR Y P+L++N+ E RA SI++QL+GE   LDYDQFL KRP++      A+F  HQD  YWP  TP+  T T SLAL++A  +NGCL+VVPGS K+  LR HRP+M   R  +H L+V+L   D V+ LPL+RGD+TVHDE IVHGS GNTS    R+TY++AFRSKA +  ER++GFTHSHN    W++ +++ T
Sbjct:    7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVSGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSKSHILSVELTDADMVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_011444442.1 (MULTISPECIES: phytanoyl-CoA dioxygenase family protein [Novosphingobium] >ABD25228.1 Phytanoyl-CoA dioxygenase [Novosphingobium aromaticivorans DSM 12444] >SCX87315.1 Phytanoyl-CoA dioxygenase (PhyH) [Novosphingobium stygium])

HSP 1 Score: 272.3 bits (695), Expect = 1.800e-69
Identity = 137/272 (50.37%), Postives = 187/272 (68.75%), Query Frame = 0
Query:   20 RQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            RQ   Y ++ ++   +  DGYI L  V+TE+E+  LE+ F+ FI G++   GKDFCDMS  +   F ++ LVNA+LPR Y P L++N+ E RA SI++QL+GE   LDYDQFL KRP++      A+F  HQD  YWP  TP+  T T SLAL++A  +NGCL+VVPGS K+  LR HRP+M   R D+H L+V++   D V+ LPL+RGD+TVHDE IVHGS GNTS    R+TY++AFRSKA +  ER++GFTHSHN    W++ +++ T
Sbjct:    7 RQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQG-LRPHRPLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVDFERSIGFTHSHNDTIAWETHLAALT 273          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_084277566.1 (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. B1] >SMC37392.1 Phytanoyl-CoA dioxygenase (PhyH) [Novosphingobium sp. B1])

HSP 1 Score: 272.3 bits (695), Expect = 1.800e-69
Identity = 136/267 (50.94%), Postives = 185/267 (69.29%), Query Frame = 0
Query:   25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMA-GRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSST 291
            Y ++ ++   +  DGYI L GV+TE+E+  LE  F+ FI G+++  GKDFCDMS  +   F ++ LVNA+LPR Y P L++N+ E RA SI++QLLGE   LDYDQFL KRP++      A+F  HQD  YWP  TP+  T T SLAL++A  +NGCL+VVPGS K+  LR HRP++   R ++H L+V+L   D V+ LPL+RGD+TVHDE IVHGS GNTS    R+TY++AFRSKA +  ER++GFTHSHN    W++ + + T
Sbjct:   12 YILTPEEIAQFHRDGYITLRGVMTEDELAPLEPEFERFIRGEVSGMGKDFCDMSGPYDREFENFSLVNAVLPRHYEPTLRDNLYERRAASISRQLLGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADLENGCLKVVPGSQKQG-LRPHRPLLGEDRSNSHILSVELTDADTVVDLPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAFRSKACVEFERSIGFTHSHNDTITWETHLGALT 273          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: PHR87695.1 (phytanoyl-CoA dioxygenase [Blastopirellula sp.])

HSP 1 Score: 265.8 bits (678), Expect = 1.700e-67
Identity = 138/277 (49.82%), Postives = 184/277 (66.43%), Query Frame = 0
Query:   19 RRQVGAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGE-DMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPV-------MAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWIS 288
            RRQ   Y I+ ++ + Y + GYI L   LTE E+  L+  F+ F+ GK+    KDFCDMSQ +G P  ++RLVNAMLP  Y  AL+N+  +  A S+  QL  E    +DYDQFL K+P +D    GA F+ HQD  YWP+ T D  T TVSLAL ++  +NGCL+V+PG+++E +LR H PV          RD++H L ++  + D  +YLP++RG VT+HDERI+HGS GNTS  N RKTYV+AFRSK T+A ERAMGFTHSHN   +WD++IS
Sbjct:   23 RRQGQRYLITSEEVQKYHDQGYIVLEEFLTESEMALLDEKFEEFVAGKVEGMEKDFCDMSQPYGTPIEEFRLVNAMLPSHYSDALKNSAYQQVAQSVVDQLRPEVPSVMDYDQFLAKKPEKD----GARFSMHQDLGYWPK-TDDTWTATVSLALTDSGLENGCLQVIPGTNRELELRSHSPVNFADGNSAGSRDESHTLVIESRESDAPVYLPVKRGSVTIHDERIIHGSAGNTSD-NWRKTYVMAFRSKQTVAEERAMGFTHSHNDVVDWDTFIS 293          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: WP_013424570.1 (phytanoyl-CoA dioxygenase family protein [Frankia inefficax] >ADP81452.1 Phytanoyl-CoA dioxygenase [Frankia inefficax])

HSP 1 Score: 265.4 bits (677), Expect = 2.200e-67
Identity = 128/259 (49.42%), Postives = 174/259 (67.18%), Query Frame = 0
Query:   23 GAYSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPVMAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETN 282
            G Y +  +D+  +  DG++ L GVLT  EV ELE V+D F+  ++ VPGKD+CDM+  +G    D+ +VN MLPR Y PA ++NV E R   IA+QL G+ M +DYDQ L K+P +      A+FAWHQD AYWP  T D RT T+ LA++E+T  NGC+R VP +  E +LR H PV  GR ++HAL  +L  GD V+  P+ RGD TVH+ER++HGS GN ST   R+ Y++A+RS+AT+  ER +GFTHSHN E +
Sbjct:    8 GRYVVDAEDRRRFAEDGFVHLAGVLTAAEVDELEVVYDRFLRREIEVPGKDYCDMAGDYGRDPSDYSIVNVMLPRRYFPAWRDNVYERRTADIARQLCGDGMTIDYDQLLAKQPHK----TDAVFAWHQDMAYWP-PTEDRRTATLWLAVDESTLANGCMRFVPATTHEAQLRAHAPVFGGRGESHALGTELRPGDDVVPTPIGRGDCTVHNERVMHGSGGN-STDGFRRAYILAYRSEATVRIERDLGFTHSHNDEAD 260          
BLAST of NO25G01850 vs. NCBI_GenBank
Match: OFC70328.1 (hypothetical protein BFC18_14230 [Alteromonas confluentis])

HSP 1 Score: 265.4 bits (677), Expect = 2.200e-67
Identity = 134/268 (50.00%), Postives = 180/268 (67.16%), Query Frame = 0
Query:   25 YSISLKDKEGYLNDGYIRLPGVLTEEEVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYLPALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWHQDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPV----MAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNPRKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISS 289
            Y +S ++K  Y  +GYI L  VLT+ E+  +E  F+ FI GK+   G+DFCDMS  +   F D+ LVNAMLPR+Y P + NN+ E  + SI++QL+G+D  LDYDQFL KRP+R      A F  HQD  YWP  TPD  T T SLA+++A ++NGCL V+PGSHK+  LR H+PV     A RD +H L V+L  G+ ++ LPL RGD+TVH+E I+HGS GN S  + R+TY+ AFRSKA +  ER +GFTHSHN + NW + + +
Sbjct:   13 YIVSSEEKLAYEKNGYITLRNVLTDAEIEGIERDFEYFITGKVPGMGRDFCDMSGPYDRKFEDFALVNAMLPRKYKPDVANNIYEKLSASISRQLIGDDATLDYDQFLAKRPNRP----DAKFTLHQDLGYWPTGTPDTITATCSLAVDDANSENGCLYVIPGSHKKG-LRVHKPVHGKSSADRDSSHILGVELLDGEALIELPLNRGDITVHNELILHGSGGNRSESSWRRTYITAFRSKACVEYERQIGFTHSHNDKVNWGTHLGA 275          
The following BLAST results are available for this feature:
BLAST of NO25G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21695.19.600e-8775.24phytanoyl- dioxygenase [Nannochloropsis gaditana][more]
WP_054123333.19.300e-7451.84phytanoyl-CoA dioxygenase family protein [Novosphi... [more]
WP_072383954.13.000e-7251.69phytanoyl-CoA dioxygenase family protein [Novosphi... [more]
WP_052242506.12.800e-7051.10phytanoyl-CoA dioxygenase family protein [Novosphi... [more]
WP_062346911.12.800e-7051.10phytanoyl-CoA dioxygenase family protein [Novosphi... [more]
WP_011444442.11.800e-6950.37MULTISPECIES: phytanoyl-CoA dioxygenase family pro... [more]
WP_084277566.11.800e-6950.94phytanoyl-CoA dioxygenase family protein [Novosphi... [more]
PHR87695.11.700e-6749.82phytanoyl-CoA dioxygenase [Blastopirellula sp.][more]
WP_013424570.12.200e-6749.42phytanoyl-CoA dioxygenase family protein [Frankia ... [more]
OFC70328.12.200e-6750.00hypothetical protein BFC18_14230 [Alteromonas conf... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006391NSK006391Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01850.1NO25G01850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633160gene_8798Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100723g2gene8734Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01850.1NO25G01850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01850 ID=NO25G01850|Name=NO25G01850|organism=Nannochloropsis oceanica|type=gene|length=2505bp
ACAGACACGATCGTCGCACGCTCAATGGAGGGTGCCGCGGTCATACCCTT
GTTTCCCAGCAGCGAGGATGGCGCGGCCCGGCGTCAGgtaagtgttggcc
tcctccttcccctccccagtgtaccctcgcccgccctcccacccatcagc
acctgcgacacgtgacgcgtacattcgagagatagcattcatatttgctg
cagctatcgccgtgatttatatctagtctaccgccacctacgccaaacag
GTCGGAGCGTACTCCATATCCCTCAAGGATAAGGAAGGCTACTTGAACGA
CGGCTACATCCGCCTGCCTGGTGTGCTGACTGAGGAGGAAGTGTTAGAGT
TGGAAAGCGTCTTTGATGCCTTTATAGAGGGGAAAATGAATGTGCCGGGA
AAAGACTTTTGTGACATGAGTCAGGCGgtacgaatgagcggaaggggaag
gccgggaggagggggtgtgtgcatgcatacgtgcgtgctttgatcctgaa
ccctgctctcaatcgtttcggttctgctccatctcattaagtttccacat
tttctaaatctcctcgtctctttttttcgctccctctgttcctcccatca
gTTCGGTATCCCTTTCCGAGACTGGCGTCTGGTCAACGCCATGCTGCCTC
GCGAGTACCTCCCTGCTTTGCAGAACAATGTGTTGGAAGCCCGGGCCCTG
TCCATCGCACAGCAGCTACTAGGGGAGGATATGGCGTTGGATTATGACCA
ATTTCTGTGCAAACGACCCAGTAGgtacggatagaggaaggagagggagg
agggagggatggaggaaggaaaggtgtgaggtaggaaacatctcacatct
gtgagctcctccgcatccccgcctcgtacttttcaccgcagGGACGGGAA
GGCTAACGGCGCCATTTTTGCTTGGCATCAGGACCAGgtaaagagtagct
gtccgccttgtgcaaccaatcgctcattgcttttctccgcttgtttcact
cgctcgcgggtccacacatatctccttcctcccaacccctacttgacccc
ttcaataccccaacgatccaataacctagtagtttcctaaatcccaaatt
atcctaatgacattagcaacctaattccccataatcataattccaataat
caattccaacgacaccaagGCCTACTGGCCCCAAGACACTCCGGACTACC
GCACGGTCACCGTCTCCCTCGCCCTTAACGAGGCCACCACCGACAATGGG
TGTCTGCGCGTCGTGCCGGGGTCGCACAAGGAAAATAAACTGAGACAGCA
CCGGCCTGTAATGGCGGGGAGGGATGgtaattgagaaaaagcggcgggag
ggagggagggagggaggaagggagaggggagggaggaaaagatcaagttt
tctcactgcatctaagttgttgttgcttttgtctttgtcgatacacgtgc
aatacagATGCGCATGCCTTGACGGTGGACTTGGAGCAAGgtatgtaaag
gcgtggcttcaaaggaacgaaggagatgccagggagaagaaacacagggg
gaaggaagggggaagaggaagagatgtccgctcatacacacagcggggca
tcttcctcacttcgtccgtctctctatcctctttctactccatgtcttcc
acatacatagGCGACCATGTCCTGTACCTGCCCCTGCGGCGGGGTGACGT
GACGGTGCATGATGAACGGATCGTCCACGGATCCGgtaagtcggacactt
aattgggggggaaacacgggcaaggcgaggcgtgcacagaatacggacaa
aaggggagaaatcagtgcgtcactactgaggcagcttttttcatgctcca
cggacatacacactctcctctgtttacagACGGGAATACCTCCACTGTCA
ACCCTCGCAAGACGTACGTCATTGCCTTTCGCTCCAAGgtacgcacggac
atcccatgtcctccctttcttccttgctgccctcctttctgaccacgcat
ctacaaagagtgggctatttcaaggatgcatttcccatgatagctgccat
tctcactcgcttaatcacgcacatcacctccccggtcaccttccctccct
actgcccctcccccctcttccctttttgccgactcgccagGCCACCATTG
CCGCTGAGCGGGCCATGGGCTTTACTCACTCCCACAATTCAGAGACAAAT
TGGGACAGTTGGATTAGCTCCTCTACCTTATCGACTGCGACGGGCACCAG
GAAGAGCAACAGCAACACGAAGGTGGAGGAGTAAGGAGTTAGGTTGAAAG
GGAAGAATGAGCGGGAGGAGATAGGAGAGGCGTTGTATGATTGTGTTCTA
TTTTGGTGGTTGTGAAAAGGGGAAGACGAAAAGAATTCATAAATATGATG
GGGTCATGAAGCGAGGAGGAGAAGAGAAAGAAGGAGAATATAAGACATTG
GTCGGCTGTATGAGGTGATGTGAAGGAGAGAAAGATAAGTAGGAATGAAA
ATAGA
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protein sequence of NO25G01850.1

>NO25G01850.1-protein ID=NO25G01850.1-protein|Name=NO25G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=309bp
MEGAAVIPLFPSSEDGAARRQVGAYSISLKDKEGYLNDGYIRLPGVLTEE
EVLELESVFDAFIEGKMNVPGKDFCDMSQAFGIPFRDWRLVNAMLPREYL
PALQNNVLEARALSIAQQLLGEDMALDYDQFLCKRPSRDGKANGAIFAWH
QDQAYWPQDTPDYRTVTVSLALNEATTDNGCLRVVPGSHKENKLRQHRPV
MAGRDDAHALTVDLEQGDHVLYLPLRRGDVTVHDERIVHGSDGNTSTVNP
RKTYVIAFRSKATIAAERAMGFTHSHNSETNWDSWISSSTLSTATGTRKS
NSNTKVEE*
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Synonyms
Publications