NO25G01830, NO25G01830 (gene) Nannochloropsis oceanica

Overview
NameNO25G01830
Unique NameNO25G01830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3916
Alignment locationchr25:546019..549934 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidase aspartic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:546019..549934 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR033121PEPTIDASE_A1
Homology
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BLAST of NO25G01830 vs. NCBI_GenBank
Match: EWM21692.1 (Peptidase aspartic [Nannochloropsis gaditana])

HSP 1 Score: 248.8 bits (634), Expect = 4.000e-62
Identity = 133/254 (52.36%), Postives = 160/254 (62.99%), Query Frame = 0 
Query:   58 AIHHPMTTLDPRLTAYFATLIFEGNQALQLLVDTGSPALLLPVIPTAALSVIPERNAVVDMEPGTLHPLIXXXXXXXXXXXXXXXXXXXXXXXXRGVGMTTRLDHTKAEATVLACEDPRCQGRCHTPDANHFCGPHGGSCQRSPL----FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWSFGAGQYSSQASGVLMKGNVSLGPLKVEEATFGAILEASPGFYPAPAAAGILGLSFGNNTLCGPE 308
            A++HP+TTLDPRLTAYFATL FEG QAL+LLVDTGSPALLLPV P+ +L  + +R +VV++ P +  PL+                         G  +TTRL+HT A+ATVLACED RCQGRCH+PD +HFCGPHGGSC++SP+                                          +W+FGAG Y+S+ASGVLM G VSLGPL+VEE  FG IL AS GFYPAP AAGILGLSFGNN+LCG E
Sbjct:  121 AVYHPITTLDPRLTAYFATLTFEGGQALRLLVDTGSPALLLPVAPSPSLGRVSQRASVVEVGPPSFQPLVTPASVAGGREG--------------GGRITTRLNHTLAQATVLACEDQRCQGRCHSPDESHFCGPHGGSCRKSPVLSPSLPVSFPPSLYGDKKRREERGKDAEEQAMESLPENQCFFNWTFGAGLYASEASGVLMTGTVSLGPLQVEEVVFGGILHASLGFYPAPTAAGILGLSFGNNSLCGSE 360
The following BLAST results are available for this feature:
BLAST of NO25G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21692.14.000e-6252.36Peptidase aspartic [Nannochloropsis gaditana][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006385NSK006385Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|220160gene_8795Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101206g2gene8737Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01830.1NO25G01830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01830.2NO25G01830.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01830.3NO25G01830.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01830.4NO25G01830.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01830.1NO25G01830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01830.2NO25G01830.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01830.3NO25G01830.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01830.4NO25G01830.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01830 ID=NO25G01830|Name=NO25G01830|organism=Nannochloropsis oceanica|type=gene|length=3916bp
ATGAAGGGAAGCATTATCTCGGCTGATGCTCTAGCCAGGAGCGGACGGGC
CGAGGGGAGGAGCAAGGAATCCTCCCTTTCCTCCTCCTCCCCCTCGTCCT
CGCACCTCCGAGGCCGCAATGATCCCACCGACTTCGACAAAGGCACCAAG
GACAACGCTTCGGTGGCTGAAGCAATCCATCATCCGATGACGACGCTAGA
CCCCCGGCTGACCGCTTACTTTGCGACGTTGATTTTCGAGGGCAACCAGG
CCCTGCAGTTGCTAGTGGATACGGGCAGgtaggcagggagggagggaagg
aaggatgggagggaagagcagtatgggacagagaagggcatggcgtttac
gcgtttacgtgtttcattgcatttatgtccatgaaggtgtgtgacgtgca
tgaaggttcgcagctgcactcctcgcctgcctctctttctccttccgccc
cccccacattcaaattttcaaacgtccttgcccccactctccctcatcat
cctcccatgttgtgggtcgtcttaactttatcgataccaacaccttccct
ccctacctccttctctccctcctcatcagTCCCGCCCTCCTCCTTCCAGT
CATACCCACTGCCGCCCTCAGCGTCATCCCCGAGCGGAACGCCGTGGTGG
ACATGGAGCCTGGAACCCTGCACCCCCTCATCTCCCCTTCCTCCTCCCCT
TCCTCTCCCTCCTCCTCCCCCTCCTCCTCTTCGTCTGCCTCTGCCTCATC
GGAGAGAGGGGTGGGTATGACCACGCGACTGGATCACACCAAGGCGGAGG
CGACGGTCTTGGCCTGCGAGGACCCCCGgtagggagggagggagggaggg
agggagggaggaaggaagggagggagggagggagggagggagggaggaag
gaaggaagggagggagggagggagggagggagggaggatcttcgccatca
cggtacactcccagggcatggacctcattttcctcccttcctctctcccc
ccctcgctcccttcctcttgcccccctcagGTGCCAGGGTCGATGCCACA
CTCCTGACGCCAACCACTTTTGTGGCCCACACGGCGGGTCCTGTCAGCGC
TCCCCCCTCTTTCCTCCCGCCCTCCCTCCCTCGCTTCCCCCCGCCCTCCC
CGCGGACAAACGACGGAAGGAGGGCGGGAAGGAAGGAGGGACGGAGGACA
TGCCAGAGAACCAGTGCTCTTTCAGTTGGTCGTTTGGGGCGGGGCAGTAC
TCGAGTCAGGCATCAGgtgagggagggagggagggagggggggagcgaag
gagggtagcagacgatccatcacattctgttcccgctcttcttgaccacg
cacctcctactctatcgaaccccttcctttctccctccctccctccctcc
ctccctccctccctcccaagGCGTCCTGATGAAGGGCAATGTGTCCCTGG
GCCCTCTCAAGGTGGAAGAAGCCACGTTTGGGGCGATCCTCGAGgtaggt
aggtagggagggagggagcgaagggggggctatcatctcagtcactcggt
gtaggtccacacacacctgctgcccttcaacccccactcaccctcctcgc
ccgccctccctccctccctccctccctccctccctccctccctccctccc
tccctccctccctccctccctcccagGCCTCTCCGGGCTTCTACCCCGCA
CCCGCCGCGGCGGGTATTCTTGGCCTGTCTTTTGGAAACAACACTTTGTG
TGGACCCGAACACACCTGCTGGCCCCCCCTCCTTGATTCCCTCCCTCCCC
CGGCACCTGACGCCTTCACCCTGTGCGCCGACGGCGATCGGGGCGCGGCC
CTCGTCCTCGGCGGGGTCGACCATTCGCTGGCCCTGGGCGGGCGGGAGGG
AGGGAGGGAGGCAGGGAGGGAGGGGGGGAAGAAGGGAGGGATCGGCTATG
TGCCCATGCTTCCTCCTTTTGCTCATTACTGGATCCGGGTGAAAGACCTG
AGGATTCGCGGCGAATCGTTGTTCCTTCCCGTCCTTGCAGCTGCAGCTGC
AGCAGCTGCTGCTGCGGGGCTGGAGGAAGGGAGGCGGTGTGCGCCCTCCC
TCCCTTCCTCGATTTTGGTCCCGCGGCCTCCAATGCCGTGTGCTCTGGCG
TCACGGGCAGCCATCCCCACGGTCACCAGCAGCAGCAGCAGTGGTGGTGG
TGGTGGTGATGGTGGTGGGAGTGCGGAGGAGGCGACCCTCCACCCCGCCC
TCGACGACGTGCCGCTCGACACGGCCATGGTGGACTCGGGAAACAGgtgg
ggaaggaggaagggggggacggagggaggggcggaggtaggggtgggaac
ctggagggggtttcaccattgacagtggcgaccatgggtcgtgtgaggga
ggaataaaagcccgcgtactcacaacacctcacttgtgtatccccccact
ccttccctccctccctctccctagTGCTACCTGCTTCCCGGAGCCTGTCT
TCGACGCCCTAAGATTCAGACTCGCCGAGCTGGTCAAGGGTGAGGAAAGG
AGGGAGGGAGGAAGGGAAGAAGGGAGGGAGGGAGGGAGGGGGGAAGACAA
GGACGCAGAGGACGCATCTATGTTTCTTTTTGACGGGGTTTCGCCCTTGA
ATCTCACTCACCATCCCCTTTCTTCCCTCCGTCCCTCTGTCCCTCCCTCC
CTCCTTCTCATGTCAAGACGTCCCGGCCGTTGCGGACGTGGCCGGTGGAC
AAACCCTCTTTGACGGCTACGGTCGTCGCTTGTCTGTACAAGAGCTCGCT
CTCCTTCCCTCCCTCGACCTCGTTCTAGAGGGGGAGGAGGTGGAAGGGGG
GAGGAGGGGGCAGGGCCGGGGGCTGAGGAAGGGACGGAGAAAGGGACGGA
GGAAGGGAGGAAGAGGAGGAAGGAGGTGGTCTTGACCTTGACCCCGGCAG
ACTATTTGCATAACGAGgtaagcagggagggagggagggagggagggagg
gagggagggagggaggaaggggaagagggatgacttgcgagcaccaaagc
aagcacctgttactcaaggacctgtatccccctcctcccctccctccctc
caccccagGGCGGCTTCTACTTCCTCAAAATTATCCGTTACGGTCATTGG
GCCATCGGACAGACTTTTCTCCGAAGAAGATACCTGGAGGTAGATCGAGC
CAACAAGAGGATGGGGTTCGCGATGCCGGTGGAGGGGTGTGTTCCTCCCT
CCCGAGGGAAGTAGAGGACGTGTGATGGACGGCCACCTGTGGGTGTGGTA
GAGTTACTTCCTTCATCCCCTATTTCGACTCTTTGATGGGGGCGAGGGGG
GGGGGATAAGAGGGAGGGAGGTAGTGTGGGCGTAGAGAAAGGAAAACAAA
GTCATGCTGTAAGGGAGAGAACGAGAAGAGAAGGGACGAATGTTTTGTGA
AATAGAGTGAGTGTAAAAAAAGAGGGTATAATAATAAAAAATAGGCAGTT
GGAGGGAGTGGAAGAAAGAGAAGGAAGATGGACGGGGAAAGGAATGTGGA
CCCTAATTCAGAGAGAGTGAAAGAGGGCAAGGTGTGGATAAGGAAAAGGG
AATGTGCATGACCATGGAGAGGAAGACAAGGCGGAAGAGGATAGTACGGA
GGAGGAGGAGAAGGGGGGGGAGGAGGTAGAGCACGAGGATGACTTCGCTC
AGCAAAAAGCCAGCCGCAGATTGACGGGACGGGATTTAAATTAGGTCGTG
AGTGGAGGGAATGGGTAAAGTGAATGTGACAAACCCAAGGAGATGCAGAG
GAATCATGGTTACCGTACATTTAGAAATTAAAGCCAAATCGAAGAATGAG
TGCGCCAGAAGCGGAATGAGATATCTTCACAATTTATAGAATAGTAGCAG
CAGCTTCTAAATTAAA
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protein sequence of NO25G01830.1

>NO25G01830.1-protein ID=NO25G01830.1-protein|Name=NO25G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp
MKGSIISADALARSGRAEGRSKESSLSSSSPSSSHLRGRNDPTDFDKGTK
DNASVAEAIHHPMTTLDPRLTAYFATLIFEGNQALQLLVDTGSPALLLPV
IPTAALSVIPERNAVVDMEPGTLHPLISPSSSPSSPSSSPSSSSSASASS
ERGVGMTTRLDHTKAEATVLACEDPRCQGRCHTPDANHFCGPHGGSCQRS
PLFPPALPPSLPPALPADKRRKEGGKEGGTEDMPENQCSFSWSFGAGQYS
SQASGVLMKGNVSLGPLKVEEATFGAILEASPGFYPAPAAAGILGLSFGN
NTLCGPEHTCWPPLLDSLPPPAPDAFTLCADGDRGAALVLGGVDHSLALG
GREGGREAGREGGKKGGIGYVPMLPPFAHYWIRVKDLRIRGESLFLPVLA
AAAAAAAAAGLEEGRRCAPSLPSSILVPRPPMPCALASRAAIPTVTSSSS
SGGGGGDGGGSAEEATLHPALDDVPLDTAMVDSGNSATCFPEPVFDALRF
RLAELVKDVPAVADVAGGQTLFDGYGRRLSVQELALLPSLDLVLEGEEVE
GGRRGQGRGLRKGRRKGRRKGGRGGRRWS*
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protein sequence of NO25G01830.2

>NO25G01830.2-protein ID=NO25G01830.2-protein|Name=NO25G01830.2|organism=Nannochloropsis oceanica|type=polypeptide|length=582bp
MKGSIISADALARSGRAEGRSKESSLSSSSPSSSHLRGRNDPTDFDKGTK
DNASVAEAIHHPMTTLDPRLTAYFATLIFEGNQALQLLVDTGSPALLLPV
IPTAALSVIPERNAVVDMEPGTLHPLISPSSSPSSPSSSPSSSSSASASS
ERGVGMTTRLDHTKAEATVLACEDPRCQGRCHTPDANHFCGPHGGSCQRS
PLFPPALPPSLPPALPADKRRKEGGKEGGTEDMPENQCSFSWSFGAGQYS
SQASGVLMKGNVSLGPLKVEEATFGAILEASPGFYPAPAAAGILGLSFGN
NTLCGPEHTCWPPLLDSLPPPAPDAFTLCADGDRGAALVLGGVDHSLALG
GREGGREAGREGGKKGGIGYVPMLPPFAHYWIRVKDLRIRGESLFLPVLA
AAAAAAAAAGLEEGRRCAPSLPSSILVPRPPMPCALASRAAIPTVTSSSS
SGGGGGDGGGSAEEATLHPALDDVPLDTAMVDSGNSATCFPEPVFDALRF
RLAELVKGEERREGGREEGREGGRGEDKDAEDASMFLFDGVSPLNLTHHP
LSSLRPSVPPSLLLMSRRPGRCGRGRWTNPL*
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protein sequence of NO25G01830.3

>NO25G01830.3-protein ID=NO25G01830.3-protein|Name=NO25G01830.3|organism=Nannochloropsis oceanica|type=polypeptide|length=511bp
MKGSIISADALARSGRAEGRSKESSLSSSSPSSSHLRGRNDPTDFDKGTK
DNASVAEAIHHPMTTLDPRLTAYFATLIFEGNQALQLLVDTGSPALLLPV
IPTAALSVIPERNAVVDMEPGTLHPLISPSSSPSSPSSSPSSSSSASASS
ERGVGMTTRLDHTKAEATVLACEDPRCQGRCHTPDANHFCGPHGGSCQRS
PLFPPALPPSLPPALPADKRRKEGGKEGGTEDMPENQCSFSWSFGAGQYS
SQASGVLMKGNVSLGPLKVEEATFGAILEASPGFYPAPAAAGILGLSFGN
NTLCGPEHTCWPPLLDSLPPPAPDAFTLCADGDRGAALVLGGVDHSLALG
GREGGREAGREGGKKGGIGYVPMLPPFAHYWIRVKDLRIRGESLFLPVLA
AAAAAAAAAGLEEGRRCAPSLPSSILVPRPPMPCALASRAAIPTVTSSSS
SGGGGGDGGGSAEEATLHPALDDVPLDTAMVDSGNRWGRRKGGTEGGAEV
GVGTWRGFHH*
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protein sequence of NO25G01830.4

>NO25G01830.4-protein ID=NO25G01830.4-protein|Name=NO25G01830.4|organism=Nannochloropsis oceanica|type=polypeptide|length=511bp
MKGSIISADALARSGRAEGRSKESSLSSSSPSSSHLRGRNDPTDFDKGTK
DNASVAEAIHHPMTTLDPRLTAYFATLIFEGNQALQLLVDTGSPALLLPV
IPTAALSVIPERNAVVDMEPGTLHPLISPSSSPSSPSSSPSSSSSASASS
ERGVGMTTRLDHTKAEATVLACEDPRCQGRCHTPDANHFCGPHGGSCQRS
PLFPPALPPSLPPALPADKRRKEGGKEGGTEDMPENQCSFSWSFGAGQYS
SQASGVLMKGNVSLGPLKVEEATFGAILEASPGFYPAPAAAGILGLSFGN
NTLCGPEHTCWPPLLDSLPPPAPDAFTLCADGDRGAALVLGGVDHSLALG
GREGGREAGREGGKKGGIGYVPMLPPFAHYWIRVKDLRIRGESLFLPVLA
AAAAAAAAAGLEEGRRCAPSLPSSILVPRPPMPCALASRAAIPTVTSSSS
SGGGGGDGGGSAEEATLHPALDDVPLDTAMVDSGNRWGRRKGGTEGGAEV
GVGTWRGFHH*
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Synonyms
Publications