NO25G01820, NO25G01820 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01820 vs. NCBI_GenBank
Match: EWM21691.1 (camphor resistance protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 126.3 bits (316), Expect = 1.300e-25 Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0
Query: 1 MLHHAKFAGLLLDGAAIGSGAFCGALLRYGAMKVQEHYKCGPWAIPVINVAGSFVLGALSVSSHVDPRLKLMMGVGFCG 80
ML H + GL LDG AIGSGA CGALLRYGA+KVQE KC PWAIP INVAGSFVL ALSVS+ VDPR +LM+GVGFCG
Sbjct: 52 MLFHLRHTGLWLDGMAIGSGAVCGALLRYGAVKVQERTKCAPWAIPCINVAGSFVLSALSVSTQVDPRFRLMLGVGFCG 130
BLAST of NO25G01820 vs. NCBI_GenBank
Match: OEU14726.1 (hypothetical protein FRACYDRAFT_269651 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 90.1 bits (222), Expect = 1.000e-14 Identity = 55/139 (39.57%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 13 DGAAIGSGAFCGALLRYGAMKVQEHY---------KCGPWAIPVINVAGSFVLGALSVSSHVD--------------------PRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAI 123
D AA+G+GAF GAL RY A K+ + K W +N++GSF+LGA+ +D PR KLM+GVGFCGS TTFSTFS D+V ++ G+L A YV NN+ V AA +
Sbjct: 8 DIAALGAGAFFGALSRYQAGKIASDFIATNPKAYGKLTGWHTAGLNISGSFLLGAIYAMPTIDVDKINQIQSNKPWERFQGLSPRAKLMLGVGFCGSFTTFSTFSYDVVTWMNEGRLVRAFSYVATNNICSVAAAGFGM 146
BLAST of NO25G01820 vs. NCBI_GenBank
Match: XP_005758604.1 (hypothetical protein EMIHUDRAFT_219523 [Emiliania huxleyi CCMP1516] >EOD06175.1 hypothetical protein EMIHUDRAFT_219523 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 87.4 bits (215), Expect = 6.400e-14 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query: 9 GLLLDGAAIGSGAFCGALLRYGAMKVQEHYKCGPWAIPVINVAGSFVLGALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVL 109
GL + A +G+GA GA+LR+G ++ + + GP AI +NV GSF LG+L+ + R L++GVGFCG+ TTFSTFSVD + +L G+ A Y L
Sbjct: 2 GLPTEAALVGAGAVPGAILRFGVSEIAKQHNVGPAAILALNVVGSFALGSLA-GNGAARRANLLLGVGFCGAFTTFSTFSVDTLTMLQRGQNSRAAAYGL 100
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_078497755.1 (fluoride efflux transporter CrcB [Paenibacillus selenitireducens] >OPA80407.1 hypothetical protein BVG16_06670 [Paenibacillus selenitireducens]) HSP 1 Score: 83.6 bits (205), Expect = 9.300e-13 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 14 GAAIGSGAFCGALLRYGAMKVQEHYKCGPWAIPVINVAGSFVLG----ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
G A+G G F GALLRYG + PW I +IN G LG A + P + L +G GF G+ TTFSTF+VD VHL+ G +G A+ Y++ + + G+L A ++L
Sbjct: 5 GIAVGLGGFAGALLRYGISEWIPAVNGFPWGILIINWTGCLFLGWFLTAAGRQFQIPPHVTLAIGTGFVGAYTTFSTFAVDTVHLMQDGHMGKALLYIVSSVIVGLLLAFAGVRL 119
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_090915556.1 (fluoride efflux transporter CrcB [Paenibacillus polysaccharolyticus] >SCX93019.1 CrcB protein [Paenibacillus polysaccharolyticus]) HSP 1 Score: 82.8 bits (203), Expect = 1.600e-12 Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 0
Query: 15 AAIGSGAFCGALLRYGAMKVQEHYKCG-PWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
A IG+G F G L RY + G PWA+ +IN GS LG +++ + P+L+L +G GF G+ TTFSTF++D V L G+ A Y+L + V G++ AL IKL
Sbjct: 5 AYIGAGGFLGTLTRYTIQLMLPSANTGFPWAVLLINAIGSLFLGFFFTIAIPEKITPQLRLAIGTGFTGAFTTFSTFTLDFVRLTEGGEWLKAAAYLLLSVVAGLVLCALGIKL 118
BLAST of NO25G01820 vs. NCBI_GenBank
Match: AGY59208.1 (camphor resistance protein CrcB [Gloeobacter kilaueensis JS1]) HSP 1 Score: 81.6 bits (200), Expect = 3.500e-12 Identity = 54/125 (43.20%), Postives = 72/125 (57.60%), Query Frame = 0
Query: 5 AKFAGLLLDGAAIGSGAFCGALLRY--GAMKVQEHYKCGPWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
A+ ++L+ + G G+L RY G VQ P +INVAGSFVLG AL V S V R +L++G GFCG TTFSTFSV+ ++LL G + A+ Y+L N +GG+ AA L L
Sbjct: 24 ARREAVVLESILVMVGGGLGSLARYWVGTAVVQRFGTVFPAGTLLINVAGSFVLGVLFALGVLSLVGSRTRLLLGAGFCGGFTTFSTFSVESLNLLQKGSVLPAMVYLLGNVLGGLAAAWLGFGL 148
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_062325029.1 (CrcB family protein [Paenibacillus pabuli]) HSP 1 Score: 80.5 bits (197), Expect = 7.900e-12 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 0
Query: 17 IGSGAFCGALLRYGAMKVQEHYKCG-PWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
IG G G L RYG G PWA+ +IN GS LG ++V + P+L+L +G GF G+LTTFSTF++D+V L G G A Y++ + + G+L AL IK+
Sbjct: 7 IGIGGLLGTLCRYGVQLSMPAANDGFPWAVLLINAIGSLFLGWFFTIAVPGKITPQLRLAIGTGFTGALTTFSTFTLDMVRLSGGGMWGKAAIYLVVSLLAGLLLCALGIKV 118
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_064635857.1 (fluoride efflux transporter CrcB [Paenibacillus sp. AD87] >OAX46852.1 putative fluoride ion transporter CrcB [Paenibacillus sp. AD87]) HSP 1 Score: 80.5 bits (197), Expect = 7.900e-12 Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0
Query: 17 IGSGAFCGALLRYGAMKVQEHYKCG-PWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
IG G G L RYG G PWA+ +IN GS LG ++V + P+L+L +G GF G+ TTFSTF++D+V L G G A+ Y++ + + G+L AL IK+
Sbjct: 7 IGIGGILGTLCRYGIQLWMPAANEGFPWAVMLINAIGSLFLGWFFTIAVPGKITPQLRLAIGTGFTGAFTTFSTFTLDMVRLSEGGMWGKAVIYLVVSLLAGLLLCALGIKV 118
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_041244810.1 (fluoride efflux transporter CrcB [Gloeobacter kilaueensis]) HSP 1 Score: 80.1 bits (196), Expect = 1.000e-11 Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 0
Query: 20 GAFCGALLRY--GAMKVQEHYKCGPWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
G G+L RY G VQ P +INVAGSFVLG AL V S V R +L++G GFCG TTFSTFSV+ ++LL G + A+ Y+L N +GG+ AA L L
Sbjct: 3 GGGLGSLARYWVGTAVVQRFGTVFPAGTLLINVAGSFVLGVLFALGVLSLVGSRTRLLLGAGFCGGFTTFSTFSVESLNLLQKGSVLPAMVYLLGNVLGGLAAAWLGFGL 112
BLAST of NO25G01820 vs. NCBI_GenBank
Match: WP_053779122.1 (fluoride efflux transporter CrcB [Paenibacillus sp. A59] >KOY18211.1 hypothetical protein AMS66_01395 [Paenibacillus sp. A59]) HSP 1 Score: 80.1 bits (196), Expect = 1.000e-11 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query: 17 IGSGAFCGALLRYGAMKVQEHYKCG-PWAIPVINVAGSFVLG---ALSVSSHVDPRLKLMMGVGFCGSLTTFSTFSVDIVHLLHAGKLGTAIGYVLFNNVGGVLAAALAIKL 125
IG G G L RYG G PWA+ +IN GS LG ++V + P+L+L +G GF G+ TTFSTF++DIV L G G A+ Y++ + G+L AL IK+
Sbjct: 7 IGIGGIVGTLCRYGIQLWMPVTNEGFPWAVLLINAIGSLFLGWFFTIAVPGKITPQLRLAIGTGFTGAFTTFSTFTLDIVRLSEGGMWGEAVIYLVVSLFAGLLLCALGIKV 118 The following BLAST results are available for this feature:
BLAST of NO25G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01820 ID=NO25G01820|Name=NO25G01820|organism=Nannochloropsis oceanica|type=gene|length=1550bpback to top protein sequence of NO25G01820.1 >NO25G01820.1-protein ID=NO25G01820.1-protein|Name=NO25G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top Synonyms
Publications
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