NO25G01670, NO25G01670 (gene) Nannochloropsis oceanica

Overview
NameNO25G01670
Unique NameNO25G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4867
Alignment locationchr25:467051..471917 -

Link to JBrowse

Properties
Property NameValue
DescriptionPectin lyase fold/virulence factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:467051..471917 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 170.2 bits (430), Expect = 4.000e-38
Identity = 81/202 (40.10%), Postives = 124/202 (61.39%), Query Frame = 0
Query:  139 ISFISIPFCTPRNTTQLEILVEESVCPVITLLPNTTYVLDHYITVSRPVTIVGRPLGMPLIDGHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIRATTLILGGGVYVEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVF 341
            + ++++  CTP+N  +L  +++ + CP +TL+P T Y +   + + R VT+VGRPLG+P+ID H T R F+V  GG LD+R+V + KG+   VVP +LY L+G   Y+RRGG A  TGC  + +       +GI+   +    + GGG+  E G  R T C     R GI +RE  F+G EFLV+ G++++TGCIF  + +F
Sbjct:    1 MGYVAVEGCTPKNAEELRYMIDHTTCPRLTLVPATNYSITEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPP-QTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIF 201          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 149.4 bits (376), Expect = 7.300e-32
Identity = 466/1190 (39.16%), Postives = 595/1190 (50.00%), Query Frame = 0
Query:  135 DGSEISFISIPFCTPRNTTQLEILVEESVCPVITLLPNTTYVLDHYITVSRPVTIVGRPLGMPLIDGHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIRATTLILGGGVYVEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGNINNLQAAFAGFWGGGLGAWNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTRRPALIYATPGIFGVWIAGNGIFFNPGMDKVVVATKAGQWKGFNNVTSKGMAKFSHMSWRFIPRKVRLKKGVTLEPN--PEPGTGEPPPSPTSPKDAAYYIGVPFFGIRRR-------------ARGRRLLDAESSSEGITN--NPSGGLLLPSTSM--PSLTTQTMKLPSANLIAQAVGQLLTLDDAAASSASSYAGLFGGSSTSFGYVEMGAVLDKDEDEAPLPLTTYFTTVGE-NXXXXXXXXXXXXXXXXXXXXDSLGSCEACDIEQETL----------------------FDGPGGTKCLIRDTC-EEEEKVQEDGQSGGFGNGLLQQMWMTG--LGEDPANTSMAVLDLRVTASSILPSSSPSTPQEKTSSRLLSGSSVLSSHILTALSETIQALGLSPRHHLRVVAVKTDPLMKKYQEAEMDERRHHRERLRALVNKPGFIVGEDDEGGQDEGEKE--GIFLFRAYFLSDWANVTNALSRTL--AANAKLLTATLQXXXXXXXXXXXXXXXXXXXXXXESVQVLREMNYFVPGSGTGLLLTPTTSSSPGXXXXXXXXXXXXXXXLTSLFDGIVDGGSSWQKGKLMTMS---GWEEDRIPSAMLYTTFISAPFRNSTMRSSSYNHTGDGSTVYYEEDPASALAQEVKVGETYTLVMHSFPPSQLLTISLVPETG----LGMDLALI---ASTVEEEGEDGGQRWSWRPNSLIRSKFGQEGDFFIEVASQNKDAFAYSQAFTL 1266
            D S   +I++  CTP    QL  LVE   CPVITL P   YVLD  I V R V I+GRPL +P+ID H   R F V   GRLDLR+V++++G    VV  +   L+G + ++R GG    TGC + +H       V ++ ++R T  + GG + +E G  R   C     RPG++ RE Y +G   LV++G++F+TG   +   +FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    T  PA++   P +F  ++AGN    N   D VV+AT+      F    + G+ K    +                E +   E G    P  P+  + A   +G     I R              A  + +L +E   EG         G+L   + +  P    Q        +   A G L ++D   A            ++ SF  VE G V       A L   +++T +   +                     +LG C+ACD+    +                      F+G G   C  RD C   +E+V+ D Q       + +QMWM+    G  P NT++ ++D  V+ +  LP      P     SR   G++V + H+ TA+++T+Q+LGLS R  LRVVA    P    Y  +            R+L         E  EGG   GE E      FRAY ++D   V N  S+    A+   LLT T+Q                        V      +++VP      LL      +                   ++   I D       G L T     G E  + P+A L             +  +S N          + D        V +G++Y L++  FPP +LL++ LVP+ G    LGM ++ +   +S          Q W+W   S+ R+K  + GD+FIEV SQ +DAFAY+QAF L
Sbjct:  176 DASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVH-DDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTD-VVLATR----NVFIIWDAPGVGKRGMSAXXXXXXXXXXXXXXAEEQDRWREEGARVEPGGPSQEQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGSVEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRAPET------LAPNTGSFPPVEQGDVGPSTLSAAMLFNASFYTPLAPGSPILVPRPDPATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAHFNGAGAAGCEFRDVCGTVQEEVERDAQE------MQEQMWMSDPERGIQP-NTTLGIMDFVVSYAPSLP------PHPHGPSR--GGTAVTAEHVQTAVNQTMQSLGLSQRLLLRVVATGNAP---PYSSSNHGVGESGEAGSRSLEQ------AETREGGIGGGEPECTATAPFRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQVPSVC----------------GVTTSNTFSFYVPSVNASALLAKEKDKN-------NFIARITGSTENAVTQYIRDDDLQSSDGFLSTEPFDFGEEGPQQPTAAL-------------LAITSQN----AKEEVEDNDVEQVRVFRVVMGKSYRLILRGFPPGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQEWTW---SVSRTKH-EAGDYFIEVTSQTQDAFAYTQAFAL 1285          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM21666.1 (hypothetical protein Naga_101714g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 138.7 bits (348), Expect = 1.300e-28
Identity = 80/175 (45.71%), Postives = 115/175 (65.71%), Query Frame = 0
Query: 1108 DGGSSWQKG---KLMTMSGWEEDRIPSAMLYTTFISAPFRNST----------MRSSSYNHTGDGSTVYYEEDP--ASALAQEVKVGETYTLVMHSFPPSQLLTISLVPETGLGMDLALIASTVEEEGEDGGQRWSWRPN-SLIRSKFGQEGDFFIEVASQNKDAFAYSQAFTLK 1267
            DGG+  ++G    L TMSGW ED IPSAMLYT+   APF NS+          + S+  +  G G     E+ P  A AL  +V+VG++YTL++H+FPP+QLLTI+L P+ G G++L ++ S   E     GQ W+W+P+ +L+ S++G E +FFIEV S+ +DAFAYSQAFT++
Sbjct:   44 DGGNRLRQGGPDPLSTMSGWVEDGIPSAMLYTSSPIAPFWNSSRTNGTRQPPPVSSARNDQRGGGDAQAAEDAPGLAKALVHQVRVGDSYTLILHAFPPAQLLTINLFPKRGQGVELGVLPSLPGEGKGGEGQDWTWKPSAALLGSEYGGE-EFFIEVVSERQDAFAYSQAFTVR 217          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana])

HSP 1 Score: 109.0 bits (271), Expect = 1.100e-19
Identity = 90/344 (26.16%), Postives = 153/344 (44.48%), Query Frame = 0
Query:   16 RKRRIMLAVVVCGFALVLGLAIVKSNRQLHQHQQPS--------SDIVSPSLPQAAAVDKASVNTTDTTAVQSSTIIXXXXXXXXXXATNTGPVASAVGNLWSSLTSAFDANNINKQGITGPDLG-------TTDGSEISFISIPFCTPRNTTQLEILVEE-SVCPVITLLPNTTYVL-----DHYITVSRPVTIVGRPLGMPLIDGHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIRATTLILGGGVYVEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQ 339
            +K  ++L   +    L+ G+ I     + H  Q P+        +  +   +P  +  DKA +        + ST            +   GP  S  G  +  L    + ++    G+ G + G       +T   + S IS   C P++  +L  + E+ S C +I+LLP   Y +     D  IT+S    I+G P+ +P IDG  + RIF ++ GG LDL++VR Y+G    +    + VL+G    V  GG  +  G   T  P     ++ I+ ++     + GG V+V GGI   T   +   +PG+++RE Y +G + LV+ G   ++G  F+  Q
Sbjct:   19 KKSLLVLFAALATIGLIAGIVIAFQPEEKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVST-----------ESLPDGPGGSLPG--YKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIA--TIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQ 347          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana])

HSP 1 Score: 88.6 bits (218), Expect = 1.500e-13
Identity = 66/214 (30.84%), Postives = 104/214 (48.60%), Query Frame = 0
Query:  141 FISIPFCTPRNTTQLEILVEESVCPVITLL---PNTTYVLD-HYITVSRPVTIVGRPLGMPLIDGHGTFRIFMVLPGGRLDLRYVRLYKG----------RARPVVPNMLYVLQGAIVYVRRG--GAAAMTGCHVTIHPSTRYTSVGISKNIRAT-TLILGGGVYVEGGIFRATGCVYTTWRPGII--YRETYFIGNEFLVMTGDVFITGCIFS 336
            F+    C PRN  +L+I VEE+ CP++ L    P    ++D + I V R V ++G P  +P ID     R F ++ GG L+L+YVR+ +G            R  + + ++ ++G  V +  G  GA  +    + +  +   T   I   I  T   I GG VYV  G  R   C +  W   I+  + +   IG + LV+ G+VF+TGC F+
Sbjct:  198 FVGKDTCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHF--WDSMILMPFTDQVAIGADILVLAGNVFVTGCTFT 409          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526] >EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 77.4 bits (189), Expect = 3.500e-10
Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0
Query:  105 VGNLWSSLTSAFDANNINKQGITGPDLGTTDGSEISFISIPFCTPRNTTQLEILVEE-SVCPVITLLPNTTYV--LDHYITVSRPVTIVGRPLGMPLIDGH-GTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIR---ATTLILGGGVYVEGGIFRATGCVYTTWRP-GIIYRETYFIGNEFLVMTGDVFITGC 333
            +G L+ +L  A   N             T   S  S   +  C P    +L+ +VE  S C V+ L   ++Y+  L   + V+  V I+G P+  P I    G +R+F V  G  +D+R+V L++   R V  N   ++ G ++ VR GG    +G    I      T  G  K +    A   I+GG V V GG F   GC    W P G        +G ++LV+ G     GC
Sbjct:  130 IGPLFGALPGAAAVNGA---------FNTLAASAASLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVL-VRTGGYFRGSG---VIFRQQAQTFEGFVKGLMDPLAPKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGC 352          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM25326.1 (hypothetical protein Naga_100880g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 77.4 bits (189), Expect = 3.500e-10
Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0
Query:  105 VGNLWSSLTSAFDANNINKQGITGPDLGTTDGSEISFISIPFCTPRNTTQLEILVEE-SVCPVITLLPNTTYV--LDHYITVSRPVTIVGRPLGMPLIDGH-GTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIR---ATTLILGGGVYVEGGIFRATGCVYTTWRP-GIIYRETYFIGNEFLVMTGDVFITGC 333
            +G L+ +L  A   N             T   S  S   +  C P    +L+ +VE  S C V+ L   ++Y+  L   + V+  V I+G P+  P I    G +R+F V  G  +D+R+V L++   R V  N   ++ G ++ VR GG    +G    I      T  G  K +    A   I+GG V V GG F   GC    W P G        +G ++LV+ G     GC
Sbjct:  130 IGPLFGALPGAAAVNGA---------FNTLAASAASLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVL-VRTGGYFRGSG---VIFRQQAQTFEGFVKGLMDPLAPKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGC 352          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: XP_005854415.1 (hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526] >EKU21941.1 hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 75.1 bits (183), Expect = 1.800e-9
Identity = 88/339 (25.96%), Postives = 144/339 (42.48%), Query Frame = 0
Query:    6 AAGVAPA------ATARKRRIML-------AVVVCGFALVLGLAIVKSNRQLHQH---QQPSSDIVS----------PSLPQAAAVD-----KASVNTTDTTAVQSSTIIXXXXXXXXXXATNTGPVASAVGNLWSSLTSAFDANNINKQGITGPDLGTTDGSEISFISIPFCTPRNTTQLEILVEE-SVCPVITLLPNTT--YVLDHYITVSRPVTIVGRPLGMPLI-DGHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIR---ATTLILGGGVYVEGGIFRATGCVYTTWRP 307
            A+G+ P+      A  R+RR++L        +VV   A+  G+    +++ +  H     P++++VS          PS P++A        KA V+ +  +A  ++T +               P    +G L+ +L  A   N             T   S  +   +  C P+N  +L+ + E  S C VI L   ++  Y L   + V+    ++G P+ +P I   +G +R+F V PGG LD+R+V L++   R V  N+  ++ G +  V  GG    T C   I      T  G  K++    A   I+GG V V GG F   GC    W P
Sbjct:    2 ASGMLPSDPQLGQAPRRRRRVLLISLGALCLIVVGALAIGFGIKGKDNDKSISTHGNKHGPATEVVSSMADTKNTIVPSAPESAPATIVEPVKAPVSESKPSAPATTTKVDDSDKILTFGDGERNP----LGPLFGALPGAAAINGA---------FNTLAASAANLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDNGVYRLFEVKPGGSLDIRFVSLFRPSPRKVDDNLSVIVAG-VALVELGGYMRGTAC---IFRQPAQTFEGFVKSLETPFARKRIVGGFVLVLGGTFFCYGCQAVRWAP 323          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana])

HSP 1 Score: 73.6 bits (179), Expect = 5.100e-9
Identity = 60/227 (26.43%), Postives = 100/227 (44.05%), Query Frame = 0
Query:  147 CTPRNTTQLEILVEESVCPVITLLPN--TTYVLDHYITVSRPVTIVGRPLGMPLIDG---HGTFRIFMVLPGGRLDLRYVRLYKG----RARPVVPNMLYV--------------LQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSV-----GISKNIRATTLILGGGVY-----VEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVF 341
            C P+   +L   V+E  C ++ L  +    Y++  +I V RP+ IVG P+ +P+ID    +   R F V+ GG LDL+Y+R+  G    + RPV  N                  + G I+  R G  A   G          + SV      + + I+AT   +GG  Y     + GG  + T C + T    +   + + +G + L++ G + +T C F+   +F
Sbjct:    4 CYPQTADELVEAVQELDCSLLFLTNSDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMF 230          
BLAST of NO25G01670 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 73.2 bits (178), Expect = 6.700e-9
Identity = 60/227 (26.43%), Postives = 99/227 (43.61%), Query Frame = 0
Query:  147 CTPRNTTQLEILVEESVCPV--ITLLPNTTYVLDHYITVSRPVTIVGRPLGMPLIDG---HGTFRIFMVLPGGRLDLRYVRLYKG----RARPVVPNMLYV--------------LQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSV-----GISKNIRATTLILGGGVY-----VEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVF 341
            C P+   +L   V+E  C +  +T      Y++  +I V RP+ IVG P+ +P+ID    +   R F V+ GG LDL+Y+R+  G    + RPV  N                  + G I+  R G  A   G          + SV      + + I+AT   +GG  Y     + GG  + T C + T    +   + + +G + L++ G + +T C F+   +F
Sbjct:  139 CYPQTADELVEAVQELDCSLLFLTNFDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMF 365          
The following BLAST results are available for this feature:
BLAST of NO25G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Match NameE-valueIdentityDescription
EWM22289.14.000e-3840.10Pectin lyase fold/virulence factor [Nannochloropsi... [more]
EWM26817.17.300e-3239.16Pectin lyase fold/virulence factor [Nannochloropsi... [more]
EWM21666.11.300e-2845.71hypothetical protein Naga_101714g2, partial [Nanno... [more]
EWM25479.11.100e-1926.16hypothetical protein Naga_100207g1 [Nannochloropsi... [more]
EWM26475.11.500e-1330.84hypothetical protein Naga_100045g21 [Nannochlorops... [more]
XP_005853421.13.500e-1028.81hypothetical protein NGA_0438900, partial [Nannoch... [more]
EWM25326.13.500e-1028.81hypothetical protein Naga_100880g2, partial [Nanno... [more]
XP_005854415.11.800e-925.96hypothetical protein NGA_0231400, partial [Nannoch... [more]
EWM26075.15.100e-926.43hypothetical protein Naga_100278g5 [Nannochloropsi... [more]
XP_005854372.16.700e-926.43hypothetical protein NGA_0163600, partial [Nannoch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL044nonsL044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR072ngnoR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004268NSK004268Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01670.2NO25G01670.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01670.1NO25G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673679gene_8770Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101714g2gene8764Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01670.2NO25G01670.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01670.1NO25G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01670 ID=NO25G01670|Name=NO25G01670|organism=Nannochloropsis oceanica|type=gene|length=4867bp
ATGACTGGAGATGCTGCGGCGGGCGTTGCGCCCGCCGCTACGGCCCGCAA
ACGACGAATTATGTTGGCTGTCGTTGTGTGTGGCTTCGCTCTAGTCCTCG
GTCTCGCCATTGTCAAATCTAATCGACAGCTCCATCAGCACCAACAACCC
TCCTCCGATATCGTAAGCCCAAGTTTGCCTCAGGCAGCAGCAGTAGACAA
GGCATCGGTCAATACGACAGACACTACGGCCGTCCAATCCAGCACTATCA
TCGCAAGCACATCTGCCGGCTCCGCCTCTTCTGCAACGAATACCGGTCCT
GTCGCTTCCGCTGTCGGAAATCTGTGGTCTTCTTTGACCTCGGCTTTCGA
TGCCAACAATATAAACAAGCAGGGAATCACCGGCCCCGATCTGGGCACCA
CGGACGGCTCCGAGATCTCCTTCATCTCCATTCCCTTCTGCACTCCCCGC
AACACCACGCAGTTGGAAATTCTGGTGGAAGAGTCTGTTTGTCCAGTGAT
AACCCTCCTTCCCAACACAACATATGTTTTGGACCATTATATCACCGTCT
CCAGGCCCGTCACCATAGTTGGTCGGCCTCTGGGCATGCCGTTGATCGAT
GGCCACGGGACCTTTCGCATCTTCATGGTCTTGCCAGGGGGGAGGTTGGA
TTTACGATACGTGAGGTTGTACAAAGGCAGGGCGCGTCCAGTTGTGCCCA
ACATGCTTTATGTCTTGCAAGGCGCCATTGTGTACGTAAGGCGAGGAGGA
GCTGCAGCAATGACCGGGTGTCACGTCACTATACATCCCTCCACGCGCTA
TACCAGCGTGGGAATTTCGAAGAATATTCGGGCGACGACTCTCATACTAG
GTGGGGGAGTGTATGTAGAAGGAGGTATATTTCGCGCGACAGGATGTGTG
TACACCACCTGGAGGCCAGGGATCATTTACCGAGAAACTTATTTCATTGG
AAATGAGTTCTTGGTCATGACTGGCGACGTGTTTATTACAGGTTGCATCT
TCAGTATGGTACAGGTGTTTTCTAATACGATCGGAGTGGGAGGGTTTGTG
TTCAATGTGGCAGGAGTTGTGGCGCTCACTGGATGTATTTTTAATTCCAA
CACCGTGTTCCTGTCTGCTATTGGCATGGGTTATGTCTGCTTCAACCAAG
GCGCATTAATCTTGACGGGGAATATAAACAACCTTCAAGCGGCGTTCGCA
GGATTTTGGGGTGGGGGACTTGGCGCATGGAATGGAGGAGGGGTTCTTAC
AATGACAGGAATGCTCAGCAATGCCGAAATCATTATGAGCGCAGGCGGTG
GTCTCGGGTTTCAAGCTGGGTGCGGCGGTGGAGTTGTGATTCGCACAGgt
gtgttttcttccatttcctcgattttccttttcccgtacttatcctgtct
ttctccccttcttacgacctttctctttctcccctccgtagagcctttct
ctttcataattgtcctctggccttatgctcacttcttccattctcacacc
gctttctgggtgaagaacgagggcacgtcttagaaggtgtccagcttgaa
ggcagaggcgaggcaagcaatctctctcgtccgcctcgcgactctatatc
ccgtcctaggcgtggcatggctaagcatctatcgcagcatctaattaccc
ctttaacgaaattcaactacagGCATCGTGCAGTCCATTCATGGCGCCGC
GGCCTTTGGCTGCGGAGTGGGGCACAGTCAGTTTTTGGGAAGCGGCGTCC
TCGTCTTTACCAATGTCGTGTTGACTAGAACCAATATGCTCGTTGTATTC
TTTGGAATTGGCGGCTACCTGTATGTAGGTGCCGGCAGTGCCACGATAAC
GAACACAGTGGCTGGCGTCGTGACCGGGATCGGGACTACTGCCGCCGCTG
GCGGAGGCAGCATGATCTTGGCAGGGTGGCTGGTGCGAACCAACAATCTC
ATCTTGGGAATATCAATGATTGTTGCCATCTTTGGGCAAGGTACCGACCT
AATGGTGGTTTCTGGAGGCGCTGTACTGGTACGTAACCGCGTAGTGACGC
GACGACCAGCTTTAATCTATGCCACGCCTGGTATTTTTGGCGTCTGGATC
GCAGGGAACGGGATATTCTTCAATCCAGGCATGGACAAGGTGGTCGTCGC
CACTAAGGCGGGTCAATGGAAAGGCTTCAACAATGTGACGTCTAAAGGGA
TGGCCAAATTTTCGCATATGTCCTGGCGCTTCATTCCTCGCAAAGTTAGG
CTCAAAAAGGGTGTGACTTTGGAGCCAAACCCAGAGCCTGGCACAGGAGA
ACCACCGCCATCGCCCACGTCGCCAAAGGACGCGGCTTACTACATTGGCG
TGCCTTTCTTTGGCATCCGTCGTCGTGCGCGTGGGCGTCGGTTGCTGGAC
GCAGAGTCGTCCAGCGAGGGTATCACGAACAACCCGTCTGGTGGTCTTCT
CTTGCCGTCAACATCGATGCCCTCTTTGACAACTCAAACTATGAAACTAC
CTTCAGCTAATCTGATCGCACAAGCAGTAGGCCAGCTTTTGACTTTGGAC
GATGCAGCGGCCTCCTCTGCTTCTTCCTACGCAGGGTTATTTGGCGGTAG
CAGCACTTCTTTTGGATATGTGGAGATGGGCGCTGTCTTGGACAAGGATG
AGGACGAGGCACCATTACCATTGACGACATATTTCACGACAGTTGGAGAG
AATGGACAGGAGCAGCAACAACAAATTCAGCAGAGCTCGTACTTTTTTGT
GGGAGATGATGAAGATTCTCTGGGTAGCTGTGAGGCTTGTGACATAGAGC
AGGAGACTCTGTTTGATGGACCTGGGGGAACCAAATGCTTGATACGAGAT
ACGTGTGAGGAAGAAGAGAAGGTCCAGGAGGACGGGCAATCGGGTGGGTT
TGGAAATGGGCTGCTCCAGCAAATGTGGATGACTGGCCTGGGAGAAGACC
CCGCCAATACGTCGATGGCCGTATTGGACCTGCGCGTGACAGCCTCCTCC
ATTCTGCCTTCATCCTCTCCGTCCACGCCACAAGAAAAGACCAGCAGCCG
TCTACTCAGCGGCAGTAGCGTTCTTTCAAGCCATATCCTTACTGCGCTTA
GTGAGACGATCCAGGCTTTGGGTCTCTCTCCTCGACATCACCTTCGTGTG
GTGGCCGTGAAGACCGACCCGTTGATGAAAAAATACCAAGAAGCCGAAAT
GGATGAACGCCGTCACCATCGAGAACGCCTTCGTGCTTTGGTGAACAAGC
CGGGGTTTATCGTGGGCGAGGATGACGAAGGGGGGCAGGATGAAGGGGAG
AAGGAAGGGATTTTCCTTTTTCGAGCCTACTTCTTGAGTGATTGGGCGAA
TGTTACCAATGCTCTTTCTCGTACCCTGGCTGCCAATGCCAAGCTGCTGA
CAGCAACGCTGCAGTCGCAGCGGCAGCAGCAGCAGCAGCAAGGTCAGCAA
ATGGGGGAGGAGGGTGGACTGGGAGGGATTGAGTCGGTGCAGGTTCTGAG
GGAGATGAACTATTTTGTTCCCGGCTCCGGGACAGGTCTGCTATTGACCC
CTACCACTTCCTCTTCTCCTGGATCCTCCCCTTCTTTCTCCTCCTCCTCT
ACCTTTTCTACCCCTTCATTGACCTCATTATTTGATGGAATCGTCGATGG
CGGCAGCAGTTGGCAAAAAGGGAAGTTAATGACAATGAGTGGGTGGGAGG
AAGATAGGATCCCCTCTGCAATGCTTTATACCACATTCATTTCTGCTCCT
TTTCGCAATAGCACCATGAGAAGCAGCAGTTACAATCACACCGGTGATGG
CTCCACAGTATATTATGAAGAGGACCCGGCGAGCGCTCTTGCTCAGGAAG
TGAAAGTGGGAGAGACCTATACCCTTGTGATGCACTCATTCCCTCCTTCC
CAACTCCTAACCATCAGCCTGGTACCCGAGACGGGGCTAGGCATGGACTT
AGCGTTGATTGCTTCCACAGTAGAGGAGGAAGGAGAAGACGGAGGGCAGC
GGTGGTCATGGCGACCAAATAGCCTAATTAGGTCGAAATTCGGGCAGGAG
GGCGACTTTTTCATCGAGGTGGCTTCTCAGAACAAAGATGCTTTTGCATA
TTCGCAGGCATTTACATTGAAATATTGAAGGGCACGAAAAGCGGATAGTG
AGCTCGATTTAATAGAAACGGATTGATATAGGAGTGATTTACGAGTGCAG
gtgagaaatgtgtgtgtgtgggtgtagacgcaggatggtaaactgaatga
cagcaggtacctgtaagtaatagaaacgatacagtactgagcaagttcac
aaagcattgaataaaacgatgttgagcgctccgctcatttatgataatac
aatacaaatgcaacagtggtgacagcaaatgcaggtaatcaattcaggca
gatctcagatcaaaacctatgtatattttagGGCCAGAAAGAGGGGATGA
GCTTCAAGAAACGACTTTAGCACCTGGAGTTTCATGCCAAAATTTTCTTC
ACCTTGCGATCGATCACTTTGCTCTTAAGCCCGATTTAGCGCCTGTCGAT
ACTAAAGATTGTGGAAAGCTATCGGCTAGGACAAGCTCATGCCCTACTTC
GGCAGGTACGGGGTCAAAGCTTATTTAAGGGAGGTTGACTCCTGGCTGCA
TCCATACCAACATAATATCAACACTGCTTCCGATTATGAATGTTACATGC
TTAATTTCTTTATTACAATCGCCTGAGGTGATATCACTTTCACTGCCCTT
TGTAGACGATCGAATGAACGGATAACCAGGAGACCATTTCCCAGATCTTT
CGCTGAGTCTTAGGACTGTAAGCATGCGGGGGCTAATAGCCGGAAGATTT
GAGCGTAACGAACAAAG
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protein sequence of NO25G01670.2

>NO25G01670.2-protein ID=NO25G01670.2-protein|Name=NO25G01670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1268bp
MTGDAAAGVAPAATARKRRIMLAVVVCGFALVLGLAIVKSNRQLHQHQQP
SSDIVSPSLPQAAAVDKASVNTTDTTAVQSSTIIASTSAGSASSATNTGP
VASAVGNLWSSLTSAFDANNINKQGITGPDLGTTDGSEISFISIPFCTPR
NTTQLEILVEESVCPVITLLPNTTYVLDHYITVSRPVTIVGRPLGMPLID
GHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGG
AAAMTGCHVTIHPSTRYTSVGISKNIRATTLILGGGVYVEGGIFRATGCV
YTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVFSNTIGVGGFV
FNVAGVVALTGCIFNSNTVFLSAIGMGYVCFNQGALILTGNINNLQAAFA
GFWGGGLGAWNGGGVLTMTGMLSNAEIIMSAGGGLGFQAGCGGGVVIRTG
IVQSIHGAAAFGCGVGHSQFLGSGVLVFTNVVLTRTNMLVVFFGIGGYLY
VGAGSATITNTVAGVVTGIGTTAAAGGGSMILAGWLVRTNNLILGISMIV
AIFGQGTDLMVVSGGAVLVRNRVVTRRPALIYATPGIFGVWIAGNGIFFN
PGMDKVVVATKAGQWKGFNNVTSKGMAKFSHMSWRFIPRKVRLKKGVTLE
PNPEPGTGEPPPSPTSPKDAAYYIGVPFFGIRRRARGRRLLDAESSSEGI
TNNPSGGLLLPSTSMPSLTTQTMKLPSANLIAQAVGQLLTLDDAAASSAS
SYAGLFGGSSTSFGYVEMGAVLDKDEDEAPLPLTTYFTTVGENGQEQQQQ
IQQSSYFFVGDDEDSLGSCEACDIEQETLFDGPGGTKCLIRDTCEEEEKV
QEDGQSGGFGNGLLQQMWMTGLGEDPANTSMAVLDLRVTASSILPSSSPS
TPQEKTSSRLLSGSSVLSSHILTALSETIQALGLSPRHHLRVVAVKTDPL
MKKYQEAEMDERRHHRERLRALVNKPGFIVGEDDEGGQDEGEKEGIFLFR
AYFLSDWANVTNALSRTLAANAKLLTATLQSQRQQQQQQGQQMGEEGGLG
GIESVQVLREMNYFVPGSGTGLLLTPTTSSSPGSSPSFSSSSTFSTPSLT
SLFDGIVDGGSSWQKGKLMTMSGWEEDRIPSAMLYTTFISAPFRNSTMRS
SSYNHTGDGSTVYYEEDPASALAQEVKVGETYTLVMHSFPPSQLLTISLV
PETGLGMDLALIASTVEEEGEDGGQRWSWRPNSLIRSKFGQEGDFFIEVA
SQNKDAFAYSQAFTLKY*
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protein sequence of NO25G01670.1

>NO25G01670.1-protein ID=NO25G01670.1-protein|Name=NO25G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1268bp
MTGDAAAGVAPAATARKRRIMLAVVVCGFALVLGLAIVKSNRQLHQHQQP
SSDIVSPSLPQAAAVDKASVNTTDTTAVQSSTIIASTSAGSASSATNTGP
VASAVGNLWSSLTSAFDANNINKQGITGPDLGTTDGSEISFISIPFCTPR
NTTQLEILVEESVCPVITLLPNTTYVLDHYITVSRPVTIVGRPLGMPLID
GHGTFRIFMVLPGGRLDLRYVRLYKGRARPVVPNMLYVLQGAIVYVRRGG
AAAMTGCHVTIHPSTRYTSVGISKNIRATTLILGGGVYVEGGIFRATGCV
YTTWRPGIIYRETYFIGNEFLVMTGDVFITGCIFSMVQVFSNTIGVGGFV
FNVAGVVALTGCIFNSNTVFLSAIGMGYVCFNQGALILTGNINNLQAAFA
GFWGGGLGAWNGGGVLTMTGMLSNAEIIMSAGGGLGFQAGCGGGVVIRTG
IVQSIHGAAAFGCGVGHSQFLGSGVLVFTNVVLTRTNMLVVFFGIGGYLY
VGAGSATITNTVAGVVTGIGTTAAAGGGSMILAGWLVRTNNLILGISMIV
AIFGQGTDLMVVSGGAVLVRNRVVTRRPALIYATPGIFGVWIAGNGIFFN
PGMDKVVVATKAGQWKGFNNVTSKGMAKFSHMSWRFIPRKVRLKKGVTLE
PNPEPGTGEPPPSPTSPKDAAYYIGVPFFGIRRRARGRRLLDAESSSEGI
TNNPSGGLLLPSTSMPSLTTQTMKLPSANLIAQAVGQLLTLDDAAASSAS
SYAGLFGGSSTSFGYVEMGAVLDKDEDEAPLPLTTYFTTVGENGQEQQQQ
IQQSSYFFVGDDEDSLGSCEACDIEQETLFDGPGGTKCLIRDTCEEEEKV
QEDGQSGGFGNGLLQQMWMTGLGEDPANTSMAVLDLRVTASSILPSSSPS
TPQEKTSSRLLSGSSVLSSHILTALSETIQALGLSPRHHLRVVAVKTDPL
MKKYQEAEMDERRHHRERLRALVNKPGFIVGEDDEGGQDEGEKEGIFLFR
AYFLSDWANVTNALSRTLAANAKLLTATLQSQRQQQQQQGQQMGEEGGLG
GIESVQVLREMNYFVPGSGTGLLLTPTTSSSPGSSPSFSSSSTFSTPSLT
SLFDGIVDGGSSWQKGKLMTMSGWEEDRIPSAMLYTTFISAPFRNSTMRS
SSYNHTGDGSTVYYEEDPASALAQEVKVGETYTLVMHSFPPSQLLTISLV
PETGLGMDLALIASTVEEEGEDGGQRWSWRPNSLIRSKFGQEGDFFIEVA
SQNKDAFAYSQAFTLKY*
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Synonyms
Publications