jgi.p|Nanoce1779_2|673679, gene_8770 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673679
Unique Namegene_8770
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_28:77868..85096 -

Link to JBrowse

Properties
Property NameValue
TranscriptId673765
ProteinId673679
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_28supercontigscaffold_28:77868..85096 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL045ncniL045Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01670NO25G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673679mRNA_8770-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673679mRNA_8770Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673679

>mRNA_8770-protein ID=mRNA_8770-protein|Name=jgi.p|Nanoce1779_2|673679|organism=Nannochloropsis oceanica|type=polypeptide|length=1440bp
MINFLLLVSRQGKTRLSKWYEHYPAKEKARAIRELTTLVLARAPKMCNFI
EWRDKKIVYKRYASLFFIAAVENTDNELITLEMIHLFVEILDRYFGNVCE
LDIIFNFHKAYYILDELFIGGQLQESSKNEVLRVCSQMDELMEEQKDDNL
ASMVAQIYKLHGKCNLSPNLSSMTGDAAAGVAPAATARKRRIMLAVVVCG
FALVLGLAIVKSNRQLHQHQQPSSDIVSPSLPQAAAVDKASVNTTDTTAV
QSSTIIASTSAGSASSATNTGPVASAVGNLWSSLTSAFDANNINKQGITG
PDLGTTDGSEISFISIPFCTPRNTTQLEILVEESVCPVITLLPNTTYVLD
HYITVSRPVTIVGRPLGMPLIDGHGTFRIFMVLPGGRLDLRYVRLYKGRA
RPVVPNMLYVLQGAIVYVRRGGAAAMTGCHVTIHPSTRYTSVGISKNIRA
TTLILGGGVYVEGGIFRATGCVYTTWRPGIIYRETYFIGNEFLVMTGDVF
ITGCIFSMVQVFSNTIGVGGFVFNVAGVVALTGCIFNSNTVFLSAIGMGY
VCFNQGAVILTGNINNLQAAFAGFWGGGLGAWNGGGVLTMTGMLSNAEII
MSAGGGLGFQAGCGGGVVIRTGIVQSIHGAAAFGCGVGHSQFLGSGVLVF
TNVVLTRTNMLVVFFGIGGYLYVGAGSATITNTVAGVVTGIGTTAAAGGG
SMILAGWLVRTNNLILGISMIVAIFGQGTDLMVVSGGAVLVRNRVVTRRP
ALIYATPGIFGVWIAGNGIFFNPGMDKVVVATKAGQWKGFNNVTSKGMAK
FSHMSWRFIPRKVRLKKGVTLEPNPEPVTGEPPPSPTSPKDAAYYIGVPF
FGIRRRARGRRLLDAESSSEGITNNPSGGLLLPSTSMPSLTTQTMKLPSA
NLIAQAVGQLLTLDDAAASSASSYAGLFGGSSTSFGYVEMGAVLDKDEDE
APLPLTTYFTTVGENGQEQQQQIQQSSYFFVGDDEDSLGSCEACDIEQET
LFDGPGGTKCLIRDTCEEEEKVQEDGQSGGFGNGLLQQMWMTGLGEDPAN
TSMAVLDLRVTASSILPSSSPSTPQEKTSSRLLSGSSVLSSHILTALSET
IQALGLSPRHHLRVVAVKTDPLMKKYQEAEMDERRHHRERLRALVNKPGF
IVGEDDEGGQDEGEKEGIFLFRAYFLSDWANVTNALSRTLAANAKLLTAT
LQSQRQQQQQQGQQMGEEGGLGGIESVQVLREMNYFVPGSGTGLLLTPTT
SSSPGSSPSFSSSSTFSTPSLTSLFDGIVDGGSSWQKGKLMTMSGWEEDR
IPSAMLYTTFISAPFRNSTMRSSSYNHTGDGSTVYYEEDPASALAQEVKV
GETYTLVMHSFPPSQLLTISLVPETGLGMDLALIASTVEEEGEDGGQRWS
WRPNSLIRSKFGQEGDFFIEVASQNKDAFAYSQAFTLKY*
back to top
Synonyms
Publications