NO25G01560, NO25G01560 (gene) Nannochloropsis oceanica

Overview
NameNO25G01560
Unique NameNO25G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2043
Alignment locationchr25:442904..444946 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:442904..444946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL044nonsL044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR072ngnoR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01560.1NO25G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642105gene_8758Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01560.1NO25G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01560 ID=NO25G01560|Name=NO25G01560|organism=Nannochloropsis oceanica|type=gene|length=2043bp
CAACAGGTTTGGAACCTAGGACTCAACATGACCCTGGCAACTGTCCTAGA
CATCGGGGGGACCGATTCCCGGGCCACTAGTATCCCTTCGGAACAGATCG
TCTCAGAGCATGGCAATCACCAAGTATGCAATGGACACAGCAGCCATGAC
GACGACGTCAAGACCGCTGCTCTTCCCACTGGATTGGAAACCGATACCAG
CACCAACGGCAGGGACCATGTGCGAAGCAGCAGCCACGTCAACAACGCCA
CGACTGCTGCTCTCCCCACAGAATTGGAGGCTGGTGCCAGCAATAAGCTC
TCCGCGCCTGTCCGGATCAGCATTGCCTTGCCTCCTGTAGATTCCAAGCT
CTCTGTGTCCCATGGAGGAGTCGGGAATGATCTCTCCGGGAGTGATATCA
ACTGCTCCTTTGAGAGCATGTCGGCCTCGGCCGTCTCTTCTGCCTCTTCT
TCCTTTTCCTCCAATTCCTCCTTCTCATCCTATGACTCCTTTGTCTCGGC
CACTGCCGACATCCTAGAGGCCATGGAAATGATCCCGCCACTTCCAAAAA
GCAGCAAAAAGAAGGGAAGGAAAGAAAAGCAAACTCAGAATAAAGTGACG
ATGACGAACGATTGTGTGAAATCTCCTCCTCTTGCTGCTACCAGTTTTGA
GGCAAGTAATGGCAGGAGTCAGGAGCAGCAGCATCGGGCAGAGGAGGAAG
GAAAATCCATCGAGGGAGAAGAGCTGGAAATGAGGAAGAAGGATGGCAAG
GAGGGGAGCAGGAAGGATAAGAGGAGGGAGGCCTCGGAGGAGGACTTCAA
GGAGGAGAGACGTCAAAAAGAAGAACTCATCATCAACGGCAGCAGCAATT
GCACGCGAGGAGCGGAGACAACGATAAAAAAGCGCAGTGGATGCAGTGAG
ATGAGAGAGAAAAGCGTGAATGGTATCTCTTCAGAAACTGCAGCAGCAGT
CTCAGCAGCAGCAGTAGCAGCCGCAGCCGCAGCCGCAGCAGCCACAGCAG
CAGAAGAAGCAGCAGAAGCAGCAGCAGCCACCACCACCATCACTGACATT
AAAAAGACTCACGGAACACCAAGCAGTACCAGCAACAATCAAAGGATGGG
CCTCTTATTGGATCCCCCCTCCTCCTCTCATGCCTCCTCCATGTTCGCCT
CCCCCTCACCCATCTTCCCTTCGTCCATTCTTTCCTCCTCCTCCTCCCCC
AACTCCCCTACGGATGACGCCGACCTACCTTCCTCTAACACCATAACTTT
CCAACAATTAAAACGAGGAGGGGGGTATGAAGGGATAGAGGAGGGCATGT
ACGAAGATGAAGGAGCGGGGGGATGTAAAAGAGTCCTTGGGTTGGTGGAG
GAGGAAGAGGGCGTGTTCGAGGTACCTACATTCAACTCCTTCATGTCGAG
AGAGGCAGCATTCAAGAGAGAGGCCGTTAGGGTGGGATGGAGGGTGTTGG
CGCGGGTGGTGGTGGGGGTGGGGTTGGCTGGCATTGTGGCGTGGGTGTTT
ATGATGTATAGATGAATGTGGAAGAGAGGAAGAGAAGGGGGGGGTAGGGG
TTCACGCGCACCTCAATAGATGATGGTGATGGTGATATGATGATGGTGAT
GATGGAGATGATTCGGTAATGATGGTGATTGACTGTGGTAAGTGGGAAGA
CCGACCGACTCCCCTATGAGCTAGAAAATGCTGATTTAAATGTGCTTTCG
TCTACTTCTTAAATTTTTATTTTTTTTTCTATAAATCGGGGTCGAAATGG
AAGAGCAGTTGCGGGTTGTGTGTTTGCGTGTGTGTAGATGTGAAGGCGTG
TGTAGGGCTGCGTCCATGCCATGTCATTGCGGTACGACCGAATACGAGAG
AGATAGAGGGCAATCGAGAGATTGATTCCTCGCTCATATTCAAAGTAAAG
GAAGAGGGTAGAGATAAATCTGGGGAAAGAACTTCGCAACACCACAGTGA
AAACGGCGAAGGATGACAGAAATTCAAAGAGGGACGGGAAAGAATAAAGA
ACCACAAGGTTAGAAATTTTGAGGGCCATTCAATGCCAATGAG
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protein sequence of NO25G01560.1

>NO25G01560.1-protein ID=NO25G01560.1-protein|Name=NO25G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bp
MTLATVLDIGGTDSRATSIPSEQIVSEHGNHQVCNGHSSHDDDVKTAALP
TGLETDTSTNGRDHVRSSSHVNNATTAALPTELEAGASNKLSAPVRISIA
LPPVDSKLSVSHGGVGNDLSGSDINCSFESMSASAVSSASSSFSSNSSFS
SYDSFVSATADILEAMEMIPPLPKSSKKKGRKEKQTQNKVTMTNDCVKSP
PLAATSFEASNGRSQEQQHRAEEEGKSIEGEELEMRKKDGKEGSRKDKRR
EASEEDFKEERRQKEELIINGSSNCTRGAETTIKKRSGCSEMREKSVNGI
SSETAAAVSAAAVAAAAAAAAATAAEEAAEAAAATTTITDIKKTHGTPSS
TSNNQRMGLLLDPPSSSHASSMFASPSPIFPSSILSSSSSPNSPTDDADL
PSSNTITFQQLKRGGGYEGIEEGMYEDEGAGGCKRVLGLVEEEEGVFEVP
TFNSFMSREAAFKREAVRVGWRVLARVVVGVGLAGIVAWVFMMYR*
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Synonyms
Publications