NO25G01500, NO25G01500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01500 vs. NCBI_GenBank
Match: EWM21680.1 (myb transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 199.9 bits (507), Expect = 2.500e-47 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 0 Query: 294 VRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISKAK 399 VRKW+AEEDAEMVRLV ELGTKQWGQIG+ LGGRSGKQCRERWHNQLDPNIKKEAWSAEEEM+LQQKH+E+GNRWAEIAR+LPGRTDNAIKNH++NARRR+S K Sbjct: 2 VRKWSAEEDAEMVRLVKELGTKQWGQIGIQLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMSMGK 106
BLAST of NO25G01500 vs. NCBI_GenBank
Match: CBN75476.1 (putative c-myb-like transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 150.2 bits (378), Expect = 2.300e-32 Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGG----RSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 K+ VRKW+ +EDAEMV+LVLELG KQWG IG L R+GKQCRERWHNQLDP IKK+ W+ EE L + HS GN+WAEIA+ LPGRTDNAIKNH+++A+RR+S+ Sbjct: 20 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGEDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSR 129
BLAST of NO25G01500 vs. NCBI_GenBank
Match: CCI44816.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 147.5 bits (371), Expect = 1.500e-31 Identity = 65/118 (55.08%), Postives = 90/118 (76.27%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISKAKGSTDSDPLVA 409 +K V KWT EED M++LV GT+ W IG L GR+GKQCRERWHNQLDP+I+K+ W+ EEE IL++ H ++GN+WAEIA+ LPGRTDNAIKNH+++++RR+ +++ S +A Sbjct: 27 RKPVSKWTDEEDNMMIKLVERYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPSIRKDPWTDEEERILKEAHEKYGNKWAEIAKKLPGRTDNAIKNHWNSSKRRLKRSRMSISESQTIA 144
BLAST of NO25G01500 vs. NCBI_GenBank
Match: XP_009514218.1 (hypothetical protein PHYSODRAFT_343494 [Phytophthora sojae] >EGZ26943.1 hypothetical protein PHYSODRAFT_343494 [Phytophthora sojae]) HSP 1 Score: 146.0 bits (367), Expect = 4.300e-31 Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 +K V KWT +ED M++LV + GT+ W IG L GR+GKQCRERWHNQLDP I+KE WS EEE IL++ H +FGN+WAEIA+ LPGRTDNAIKNH+++++RR+ + Sbjct: 27 RKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWSPEEERILRELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 132
BLAST of NO25G01500 vs. NCBI_GenBank
Match: OWZ13371.1 (Myb-like DNA-binding protein [Phytophthora megakarya]) HSP 1 Score: 146.0 bits (367), Expect = 4.300e-31 Identity = 66/130 (50.77%), Postives = 94/130 (72.31%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISKAKGSTDSDPLVAPAAGGVGTISSN 421 +K V KWT +ED M++LV + GT+ W IG L GR+GKQCRERWHNQLDP I+KE W+++EE +L++ H +FGN+WAEIA+ LPGRTDNAIKNH+++++RR+ + T S ++G + S + Sbjct: 25 RKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTSDEEQLLKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGNRPTASQRKCRDSSGSESSFSGD 154
BLAST of NO25G01500 vs. NCBI_GenBank
Match: XP_009821554.1 (hypothetical protein H257_00523 [Aphanomyces astaci] >ETV89154.1 hypothetical protein H257_00523 [Aphanomyces astaci]) HSP 1 Score: 145.2 bits (365), Expect = 7.400e-31 Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRR-----ISKAKGSTDSDPLVAP 410 +KS+ KWT EEDA M+ LV GT++W IG L GR+GKQCRERWHNQLDP+I+K+ W+++EE +L+ H ++GN+WAEIA+ LPGRTDNAIKNH+++ +RR + +AK ST S PL P Sbjct: 18 RKSISKWTPEEDALMMELVQTHGTRRWSVIGSLLSGRNGKQCRERWHNQLDPSIRKDPWTSDEETLLKVAHHKYGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRAMLHRAKASTMS-PLPQP 140
BLAST of NO25G01500 vs. NCBI_GenBank
Match: XP_002909519.1 (myb-like DNA-binding protein, putative [Phytophthora infestans T30-4] >EEY58333.1 myb-like DNA-binding protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 144.8 bits (364), Expect = 9.700e-31 Identity = 64/106 (60.38%), Postives = 85/106 (80.19%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 +K V KWT +ED M++LV + GT+ W IG L GR+GKQCRERWHNQLDP I+KE W+ EEE IL++ H +FGN+WAEIA+ LPGRTDNAIKNH+++++RR+ + Sbjct: 29 RKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134
BLAST of NO25G01500 vs. NCBI_GenBank
Match: EWM22086.1 (hypothetical protein Naga_100039g34 [Nannochloropsis gaditana]) HSP 1 Score: 144.4 bits (363), Expect = 1.300e-30 Identity = 64/106 (60.38%), Postives = 85/106 (80.19%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 +++VRKW +ED + LV E GTK WG I GR+GKQCRERWHNQLDP+IKK+AW+ +EE +L + H++FGNRWAEIA+ LPGRTDNAIKN +++A+RR+S+ Sbjct: 163 RRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268
BLAST of NO25G01500 vs. NCBI_GenBank
Match: ETI50638.1 (hypothetical protein F443_05796 [Phytophthora parasitica P1569]) HSP 1 Score: 144.1 bits (362), Expect = 1.600e-30 Identity = 63/106 (59.43%), Postives = 85/106 (80.19%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 +K V KWT +ED M++LV + GT+ W IG L GR+GKQCRERWHNQLDP I+KE W+ +EE IL++ H +FGN+WAEIA+ LPGRTDNAIKNH+++++RR+ + Sbjct: 26 RKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of NO25G01500 vs. NCBI_GenBank
Match: ETK90599.1 (hypothetical protein L915_05663 [Phytophthora parasitica] >ETL44010.1 hypothetical protein L916_05601 [Phytophthora parasitica] >ETO79461.1 hypothetical protein F444_05844 [Phytophthora parasitica P1976] >ETP20412.1 hypothetical protein F441_05801 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 144.1 bits (362), Expect = 1.600e-30 Identity = 63/106 (59.43%), Postives = 85/106 (80.19%), Query Frame = 0 Query: 291 KKSVRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKNHYHNARRRISK 397 +K V KWT +ED M++LV + GT+ W IG L GR+GKQCRERWHNQLDP I+KE W+ +EE IL++ H +FGN+WAEIA+ LPGRTDNAIKNH+++++RR+ + Sbjct: 26 RKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131 The following BLAST results are available for this feature:
BLAST of NO25G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01500 ID=NO25G01500|Name=NO25G01500|organism=Nannochloropsis oceanica|type=gene|length=3280bpback to top protein sequence of NO25G01500.2 >NO25G01500.2-protein ID=NO25G01500.2-protein|Name=NO25G01500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=750bpback to top protein sequence of NO25G01500.1 >NO25G01500.1-protein ID=NO25G01500.1-protein|Name=NO25G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=681bpback to top Synonyms
Publications
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