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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr25 | genome | chr25:431527..434806 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO25G01500.2 vs.
Match: EWM21680.1 (myb transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 7.900e-42 Identity = 83/91 (91.21%), Postives = 89/91 (97.80%), Query Frame = 0
Query: 294 VRKWTAEEDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIK 385
VRKW+AEEDAEMVRLV ELGTKQWGQIG+ LGGRSGKQCRERWHNQLDPNIKKEAWSAEEEM+LQQKH+E+GNRWAEIAR+LPGRTDNAIK
Sbjct: 2 VRKWSAEEDAEMVRLVKELGTKQWGQIGIQLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIK 92
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO25G01500.2 ID=NO25G01500.2|Name=NO25G01500.2|organism=Nannochloropsis oceanica|type=mRNA|length=3143bp
GTGGTCGTCTCTCATCGACAACACCCACAACTACCAACAACTGCCCAGCA
ACGCCTCAACGGTTGTTGCATGTGGGCCGCCCTTGTGCTTTCCCTCTAAA
ATGAGGCGGTGCTATGCCCTCGTTGACAAGACCAGCAGGGGGCTGTGTAG
CCGTGTTTTTGGGTGGGTTGGGCGCATTTGTCCCTGAATTTTGTGGCGCC
TGTGGGTGTCTTGCTAAGGTGCTATGCCCTCTTACTTCACCCCGCAACAC
AGGCCTTTACTGCGCCCGCAACAGACAATCACCGCCCCCTTCTCACCAAG
TCAGCAGTGCGAACGATCCATCAGCTTGTTGGCCGAAGCCCTGATGCCGG
GGCACATTTACCAGTGCTGCATACGAAAAGCACAGACGCCTTTTTCAAGC
CCCAAGGCGAGAAGAGATGCTTCCTGTGCACCGTGTACCCAGCAACAGAA
AAGAATATGACCCACTCTAACAGTCAATCCATCATTCCACACGTATAAAC
GCATGCAGCTCACAGAGTTAGCGGCAGTGACAGGGTCTTCAGGACGAACG
AGAGCCGAGCCGGTGTGGGAATTTTCGAGTCTTACTTCCCATCCTCAAGC
AACAACCCAGGGCCTCCGTCTCCTCGCACCCACAGCATCAATTTACAATA
GCTTCCGAGCAGCAGCTCCGACAACCATGGATAACAATATGTACATGCAA
CAGCTGCAGCAGCAACAGCAGCAACAACAACAACAACAACAACAACAACA
ACAACAGCAGCAACAGCATCAGCAACAGCCCCCCCAAGAGTTCGACGCTA
TGACATCCTCCCAACAACAACAGTCGCAATACCTCCAACAGCAACAACAG
CAACAACAGCAACAACAACACCTGATGCACGGCACGGGTGCTTATGGCCA
GCCCCCCCGTCAACCTTTCAATCCTCCTTTCCCGGCCCTCAGTGGCGCCG
GCTCCCCAATCCCATTCCTCCTGCACTCCGCCCCTCCTCCCCCTCCTTCT
GCCTCTTCCTCCGCCCCTCCCAGTCAATCCCAGCAATCAAATTCCAGAAA
CATCACCCCTCCCGCGATGACGCCGGAGGCCCTGGCGGTGTTTACCCAGA
ACATGGACATGAGTAGTTTGCAGGCACAAGCGGCGGCCTACTACCAATTG
ATGGCTTCCCACGGTTTGCCTGTCCCTCACCCCTATGGTTTTGCTCCTGG
GCAGGAAGGAGGGGGGATAGGAGGAGGAGTGGGGGGAGGGTTTCCTATGC
CACCTGTAGCGATGGGTGGGGGGCCTTTGCACCAGGAGGGGGAAAGAGGG
GTAGGACGAGGAAAAGGAAAAGCAGCGGCAGGAGGAGGTACCGGTGGTGG
TGAAAAGGCGGGACCGAAGGGGAAGAAGAGCGTGAGGAAATGGACAGCAG
AAGAAGACGCAGAGATGGTGCGGCTGGTATTGGAGTTGGGCACGAAACAA
TGGGGTCAGATCGGGTTGAATCTAGGTGGGAGGAGCGGAAAGCAGTGTAG
AGAGAGGTGGCACAATCAGCTTGACCCGAACATAAAGAAGGAGGCCTGGT
CAGCGGAGGAGGAGATGATATTGCAGCAGAAGCACTCGGAATTTGGAAAC
CGTTGGGCGGAAATAGCGCGCTATCTGCCGGGGAGGACGGACAATGCGAT
TAAGGTGGAAAGGGAGGGAAGGAAGGAGGGGGGGAGGGAGGACATGCAGT
TGTGGGGGAGAGGCGGCATGCATGTGTGCTTGGTGCTTGTGGGAACCTTC
CTCCTTGCCATGGAAAACCTACCCGCATTCGTTCACAGTTTTCATCACCT
TCTCTTCCCTCCCTCCCTCCTTATTTTCGTTCTCTTCATTCTTCCTCCCT
GTCGTACACAGAACCATTACCACAACGCCCGGCGTCGGATCAGCAAAGCC
AAAGGATCCACCGATAGCGACCCTCTTGTCGCTCCTGCTGCTGGTGGTGT
CGGCACTATCAGCAGCAATAACACAAACCCCACCATTTTGAATGCCCGTC
CTCCCTCCCGCCCTCCCTCCCTCCCTCCCCACCCCTCTTTCGGGATCACA
CCCCCTCCCGCGATGCCCCACAACCAGCCCCCAGGCGGGATGGCCGCGCC
CTCCCCTCTCACGGGAGCCTTCCTTTCCTCCCTCCCTCCCTCGGGCCCTT
CCCCTACCGCCGGCCTGCCCATGCAATTCAATCCCCTCCCTCTCCCCGGC
ACCGGCGACCTCGCCCTCCCTCCCGTCTTCCCCCCCTCCTTCCCCCTCCC
TGTGCCCGCCACAAAACTGTCTCCCGAGCAAGGATCGAGTGAGGGGGGGG
CGACGACCGAAGAGGCTGAAGCAGGAGAAGAGAAGGGGAGGGAGGGAGGG
AAGAAGGACGGTCCGGATGAGGCAGAGATACTTTTGTCTCTGAGCTGCCC
TCAGAGTCGGAGCAAGGAGGGAGGGAGGGAGGAAGGGAAGGAGGACGAAA
CGACAGGCGCGAGCAGCACTCCGGGGGGAGGGCGAAAGCGGGCGAGGGAG
GGGGAAGGGAAGGAGGAGGGAGGGGGGGAGGTAATTCTGTCTGATAAGCC
TCCAGCTGTGTCGTCAATCCCGGAGGCAGACGCTGCGTCTTCCCCTGTTC
CATTGCAGGAGGGCAGCTGTGAAAAAGCGGAGGAGCAGGTGGAAGACGGG
AAGAAGGACGAGATGACGAGTCCTCTGGCGGAAGCCGCAACGGAGAGAGG
GAGGGAGGATGAGAGAATGGAAGCAGCAGCAGTAACAGTTGCAGAGGTCT
AAGGGCATTGAGATCGGGGCTAGGAAGGAGGAGGGGAGGTAGGGAAGGAT
TCCAAGTAATAATCATGAGTATGCACACCCTAATTTGCCAGGTTAGCACT
GAAGAGGCGCAAAGCACGTGTATTCCTCCGTCGTCTCTCCCTTTCTCCCT
CCCTCCCTCCCTCCTCTTTTTTGTGCGCGGACGGGAGTGGTTAGGAAGGA
GGGAAGTGGGGGAGGAGGGAAGGGTGGTGACCAGGAAAGCACTCACAAAA
ATCGATCTCAAACTCGCGGCCTTGAAACGACAACAAACGCAGCCAGCAGC
AGCAGCAAGGAATTATGACATATATATCATATAGCAGCAGCAGCAAGGAA
TTATGATATATATATCATATAGCAGCAGCAGCAAGGAATTATG back to topprotein sequence of NO25G01500.2 >NO25G01500.2-protein ID=NO25G01500.2-protein|Name=NO25G01500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=750bp
MQLTELAAVTGSSGRTRAEPVWEFSSLTSHPQATTQGLRLLAPTASIYNS
FRAAAPTTMDNNMYMQQLQQQQQQQQQQQQQQQQQQQQHQQQPPQEFDAM
TSSQQQQSQYLQQQQQQQQQQQHLMHGTGAYGQPPRQPFNPPFPALSGAG
SPIPFLLHSAPPPPPSASSSAPPSQSQQSNSRNITPPAMTPEALAVFTQN
MDMSSLQAQAAAYYQLMASHGLPVPHPYGFAPGQEGGGIGGGVGGGFPMP
PVAMGGGPLHQEGERGVGRGKGKAAAGGGTGGGEKAGPKGKKSVRKWTAE
EDAEMVRLVLELGTKQWGQIGLNLGGRSGKQCRERWHNQLDPNIKKEAWS
AEEEMILQQKHSEFGNRWAEIARYLPGRTDNAIKVEREGRKEGGREDMQL
WGRGGMHVCLVLVGTFLLAMENLPAFVHSFHHLLFPPSLLIFVLFILPPC
RTQNHYHNARRRISKAKGSTDSDPLVAPAAGGVGTISSNNTNPTILNARP
PSRPPSLPPHPSFGITPPPAMPHNQPPGGMAAPSPLTGAFLSSLPPSGPS
PTAGLPMQFNPLPLPGTGDLALPPVFPPSFPLPVPATKLSPEQGSSEGGA
TTEEAEAGEEKGREGGKKDGPDEAEILLSLSCPQSRSKEGGREEGKEDET
TGASSTPGGGRKRAREGEGKEEGGGEVILSDKPPAVSSIPEADAASSPVP
LQEGSCEKAEEQVEDGKKDEMTSPLAEAATERGREDERMEAAAVTVAEV* back to topmRNA from alignment at chr25:431527..434806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO25G01500.2 ID=NO25G01500.2|Name=NO25G01500.2|organism=Nannochloropsis oceanica|type=mRNA|length=3280bp|location=Sequence derived from alignment at chr25:431527..434806- (Nannochloropsis oceanica)
GTGGTCGTCTCTCATCGACAACACCCACAACTACCAACAACTGCCCAGCA
ACGCCTCAACGGTTGTTGCATGTGGGCCGCCCTTGTGCTTTCCCTCTAAA
ATGAGGCGGTGCTATGCCCTCGTTGACAAGACCAGCAGGGGGCTGTGTAG
CCGTGTTTTTGGGTGGGTTGGGCGCATTTGTCCCTGAATTTTGTGGCGCC
TGTGGGTGTCTTGCTAAGGTGCTATGCCCTCTTACTTCACCCCGCAACAC
AGGCCTTTACTGCGCCCGCAACAGACAATCACCGCCCCCTTCTCACCAAG
TCAGCAGTGCGAACGATCCATCAGCTTGTTGGCCGAAGCCCTGATGCCGG
GGCACATTTACCAGTGCTGCATACGAAAAGCACAGACGCCTTTTTCAAGC
CCCAAGGCGAGAAGAGATGCTTCCTGTGCACCGTGTACCCAGCAACAGAA
AAGAATATGACCCACTCTAACAGTCAATCCATCATTCCACACGTATAAAC
GCATGCAGCTCACAGAGTTAGCGGCAGTGACAGGGTCTTCAGGACGAACG
AGAGCCGAGCCGGTGTGGGAATTTTCGAGTCTTACTTCCCATCCTCAAGC
AACAACCCAGGGCCTCCGTCTCCTCGCACCCACAGCATCAATTTACAATA
GCTTCCGAGCAGCAGCTCCGACAACCATGGATAACAATATGTACATGCAA
CAGCTGCAGCAGCAACAGCAGCAACAACAACAACAACAACAACAACAACA
ACAACAGCAGCAACAGCATCAGCAACAGCCCCCCCAAGAGTTCGACGCTA
TGACATCCTCCCAACAACAACAGTCGCAATACCTCCAACAGCAACAACAG
CAACAACAGCAACAACAACACCTGATGCACGGCACGGGTGCTTATGGCCA
GCCCCCCCGTCAACCTTTCAATCCTCCTTTCCCGGCCCTCAGTGGCGCCG
GCTCCCCAATCCCATTCCTCCTGCACTCCGCCCCTCCTCCCCCTCCTTCT
GCCTCTTCCTCCGCCCCTCCCAGTCAATCCCAGCAATCAAATTCCAGAAA
CATCACCCCTCCCGCGATGACGCCGGAGGCCCTGGCGGTGTTTACCCAGA
ACATGGACATGAGTAGTTTGCAGGCACAAGCGGCGGCCTACTACCAATTG
ATGGCTTCCCACGGTTTGCCTGTCCCTCACCCCTATGGTTTTGCTCCTGG
GCAGGAAGGAGGGGGGATAGGAGGAGGAGTGGGGGGAGGGTTTCCTATGC
CACCTGTAGCGATGGGTGGGGGGCCTTTGCACCAGGAGGGGGAAAGAGGG
GTAGGACGAGGAAAAGGAAAAGCAGCGGCAGGAGGAGGTACCGGTGGTGG
TGAAAAGGCGGGACCGAAGGGGAAGAAGAGCGTGAGGAAATGGACAGCAG
AAGAAGACGCAGAGATGGTGCGGCTGGTATTGGAGTTGGGCACGAAACAA
TGGGGTCAGATCGGGTTGAATCTAGGTGGGAGGAGCGGAAAGCAGTGTAG
AGAGAGGTGGCACAATCAGGTGGGTTCCTCTGCCCTTTCTACCTCCCTCC
CTCCCTTCCCCCCTCCCTGCCTTCATCAAAGTTGACTTGATACAAAACTT
TTACTCTTACCGCGTCTTCCCTCCTTCTCTTCCTCCCTCCCTCCCTCCCT
CCCTAGCTTGACCCGAACATAAAGAAGGAGGCCTGGTCAGCGGAGGAGGA
GATGATATTGCAGCAGAAGCACTCGGAATTTGGAAACCGTTGGGCGGAAA
TAGCGCGCTATCTGCCGGGGAGGACGGACAATGCGATTAAGGTGGAAAGG
GAGGGAAGGAAGGAGGGGGGGAGGGAGGACATGCAGTTGTGGGGGAGAGG
CGGCATGCATGTGTGCTTGGTGCTTGTGGGAACCTTCCTCCTTGCCATGG
AAAACCTACCCGCATTCGTTCACAGTTTTCATCACCTTCTCTTCCCTCCC
TCCCTCCTTATTTTCGTTCTCTTCATTCTTCCTCCCTGTCGTACACAGAA
CCATTACCACAACGCCCGGCGTCGGATCAGCAAAGCCAAAGGATCCACCG
ATAGCGACCCTCTTGTCGCTCCTGCTGCTGGTGGTGTCGGCACTATCAGC
AGCAATAACACAAACCCCACCATTTTGAATGCCCGTCCTCCCTCCCGCCC
TCCCTCCCTCCCTCCCCACCCCTCTTTCGGGATCACACCCCCTCCCGCGA
TGCCCCACAACCAGCCCCCAGGCGGGATGGCCGCGCCCTCCCCTCTCACG
GGAGCCTTCCTTTCCTCCCTCCCTCCCTCGGGCCCTTCCCCTACCGCCGG
CCTGCCCATGCAATTCAATCCCCTCCCTCTCCCCGGCACCGGCGACCTCG
CCCTCCCTCCCGTCTTCCCCCCCTCCTTCCCCCTCCCTGTGCCCGCCACA
AAACTGTCTCCCGAGCAAGGATCGAGTGAGGGGGGGGCGACGACCGAAGA
GGCTGAAGCAGGAGAAGAGAAGGGGAGGGAGGGAGGGAAGAAGGACGGTC
CGGATGAGGCAGAGATACTTTTGTCTCTGAGCTGCCCTCAGAGTCGGAGC
AAGGAGGGAGGGAGGGAGGAAGGGAAGGAGGACGAAACGACAGGCGCGAG
CAGCACTCCGGGGGGAGGGCGAAAGCGGGCGAGGGAGGGGGAAGGGAAGG
AGGAGGGAGGGGGGGAGGTAATTCTGTCTGATAAGCCTCCAGCTGTGTCG
TCAATCCCGGAGGCAGACGCTGCGTCTTCCCCTGTTCCATTGCAGGAGGG
CAGCTGTGAAAAAGCGGAGGAGCAGGTGGAAGACGGGAAGAAGGACGAGA
TGACGAGTCCTCTGGCGGAAGCCGCAACGGAGAGAGGGAGGGAGGATGAG
AGAATGGAAGCAGCAGCAGTAACAGTTGCAGAGGTCTAAGGGCATTGAGA
TCGGGGCTAGGAAGGAGGAGGGGAGGTAGGGAAGGATTCCAAGTAATAAT
CATGAGTATGCACACCCTAATTTGCCAGGTTAGCACTGAAGAGGCGCAAA
GCACGTGTATTCCTCCGTCGTCTCTCCCTTTCTCCCTCCCTCCCTCCCTC
CTCTTTTTTGTGCGCGGACGGGAGTGGTTAGGAAGGAGGGAAGTGGGGGA
GGAGGGAAGGGTGGTGACCAGGAAAGCACTCACAAAAATCGATCTCAAAC
TCGCGGCCTTGAAACGACAACAAACGCAGCCAGCAGCAGCAGCAAGGAAT
TATGACATATATATCATATAGCAGCAGCAGCAAGGAATTATGATATATAT
ATCATATAGCAGCAGCAGCAAGGAATTATG back to topCoding sequence (CDS) from alignment at chr25:431527..434806- >NO25G01500.2 ID=NO25G01500.2|Name=NO25G01500.2|organism=Nannochloropsis oceanica|type=CDS|length=2250bp|location=Sequence derived from alignment at chr25:431527..434806- (Nannochloropsis oceanica)
ATGCAGCTCACAGAGTTAGCGGCAGTGACAGGGTCTTCAGGACGAACGAG
AGCCGAGCCGGTGTGGGAATTTTCGAGTCTTACTTCCCATCCTCAAGCAA
CAACCCAGGGCCTCCGTCTCCTCGCACCCACAGCATCAATTTACAATAGC
TTCCGAGCAGCAGCTCCGACAACCATGGATAACAATATGTACATGCAACA
GCTGCAGCAGCAACAGCAGCAACAACAACAACAACAACAACAACAACAAC
AACAGCAGCAACAGCATCAGCAACAGCCCCCCCAAGAGTTCGACGCTATG
ACATCCTCCCAACAACAACAGTCGCAATACCTCCAACAGCAACAACAGCA
ACAACAGCAACAACAACACCTGATGCACGGCACGGGTGCTTATGGCCAGC
CCCCCCGTCAACCTTTCAATCCTCCTTTCCCGGCCCTCAGTGGCGCCGGC
TCCCCAATCCCATTCCTCCTGCACTCCGCCCCTCCTCCCCCTCCTTCTGC
CTCTTCCTCCGCCCCTCCCAGTCAATCCCAGCAATCAAATTCCAGAAACA
TCACCCCTCCCGCGATGACGCCGGAGGCCCTGGCGGTGTTTACCCAGAAC
ATGGACATGAGTAGTTTGCAGGCACAAGCGGCGGCCTACTACCAATTGAT
GGCTTCCCACGGTTTGCCTGTCCCTCACCCCTATGGTTTTGCTCCTGGGC
AGGAAGGAGGGGGGATAGGAGGAGGAGTGGGGGGAGGGTTTCCTATGCCA
CCTGTAGCGATGGGTGGGGGGCCTTTGCACCAGGAGGGGGAAAGAGGGGT
AGGACGAGGAAAAGGAAAAGCAGCGGCAGGAGGAGGTACCGGTGGTGGTG
AAAAGGCGGGACCGAAGGGGAAGAAGAGCGTGAGGAAATGGACAGCAGAA
GAAGACGCAGAGATGGTGCGGCTGGTATTGGAGTTGGGCACGAAACAATG
GGGTCAGATCGGGTTGAATCTAGGTGGGAGGAGCGGAAAGCAGTGTAGAG
AGAGGTGGCACAATCAGCTTGACCCGAACATAAAGAAGGAGGCCTGGTCA
GCGGAGGAGGAGATGATATTGCAGCAGAAGCACTCGGAATTTGGAAACCG
TTGGGCGGAAATAGCGCGCTATCTGCCGGGGAGGACGGACAATGCGATTA
AGGTGGAAAGGGAGGGAAGGAAGGAGGGGGGGAGGGAGGACATGCAGTTG
TGGGGGAGAGGCGGCATGCATGTGTGCTTGGTGCTTGTGGGAACCTTCCT
CCTTGCCATGGAAAACCTACCCGCATTCGTTCACAGTTTTCATCACCTTC
TCTTCCCTCCCTCCCTCCTTATTTTCGTTCTCTTCATTCTTCCTCCCTGT
CGTACACAGAACCATTACCACAACGCCCGGCGTCGGATCAGCAAAGCCAA
AGGATCCACCGATAGCGACCCTCTTGTCGCTCCTGCTGCTGGTGGTGTCG
GCACTATCAGCAGCAATAACACAAACCCCACCATTTTGAATGCCCGTCCT
CCCTCCCGCCCTCCCTCCCTCCCTCCCCACCCCTCTTTCGGGATCACACC
CCCTCCCGCGATGCCCCACAACCAGCCCCCAGGCGGGATGGCCGCGCCCT
CCCCTCTCACGGGAGCCTTCCTTTCCTCCCTCCCTCCCTCGGGCCCTTCC
CCTACCGCCGGCCTGCCCATGCAATTCAATCCCCTCCCTCTCCCCGGCAC
CGGCGACCTCGCCCTCCCTCCCGTCTTCCCCCCCTCCTTCCCCCTCCCTG
TGCCCGCCACAAAACTGTCTCCCGAGCAAGGATCGAGTGAGGGGGGGGCG
ACGACCGAAGAGGCTGAAGCAGGAGAAGAGAAGGGGAGGGAGGGAGGGAA
GAAGGACGGTCCGGATGAGGCAGAGATACTTTTGTCTCTGAGCTGCCCTC
AGAGTCGGAGCAAGGAGGGAGGGAGGGAGGAAGGGAAGGAGGACGAAACG
ACAGGCGCGAGCAGCACTCCGGGGGGAGGGCGAAAGCGGGCGAGGGAGGG
GGAAGGGAAGGAGGAGGGAGGGGGGGAGGTAATTCTGTCTGATAAGCCTC
CAGCTGTGTCGTCAATCCCGGAGGCAGACGCTGCGTCTTCCCCTGTTCCA
TTGCAGGAGGGCAGCTGTGAAAAAGCGGAGGAGCAGGTGGAAGACGGGAA
GAAGGACGAGATGACGAGTCCTCTGGCGGAAGCCGCAACGGAGAGAGGGA
GGGAGGATGAGAGAATGGAAGCAGCAGCAGTAACAGTTGCAGAGGTCTAA back to top
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