NO25G01470, NO25G01470 (gene) Nannochloropsis oceanica

Overview
NameNO25G01470
Unique NameNO25G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4286
Alignment locationchr25:418078..422363 +

Link to JBrowse

Properties
Property NameValue
DescriptionBeta-lactamase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:418078..422363 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012338Beta-lactam/transpept-like
IPR001466Beta-lactam-related
Homology
BLAST of NO25G01470 vs. NCBI_GenBank
Match: EWM21663.1 (beta-lactamase [Nannochloropsis gaditana])

HSP 1 Score: 263.5 bits (672), Expect = 1.700e-66
Identity = 125/199 (62.81%), Postives = 152/199 (76.38%), Query Frame = 0
Query:    1 MGAATWTYKAVLFLLSSLVAL------QGIRTAGAQNAMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDNPNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEG 194
            MG  TWT     F+L +   L      +  +      +MPYA P+EV VS DI  R+QP+LD+ T  RK+PGS+VM+ARHGKII+EQ+SGYDNP+YIFRLFSQSKPITAAATL+CVD  LF L+DPI  FIPEF+ LRV+V  T GA ++T PLRR+ITIRHLLTHT GFVYGDGGD+VVDEMYR+ K+LDLW QD++G
Sbjct:    1 MGGGTWTNAVAPFVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVLDLWGQDMDG 199          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: KPJ75268.1 (hypothetical protein AMS14_03905 [Planctomycetes bacterium DG_20])

HSP 1 Score: 263.1 bits (671), Expect = 2.200e-66
Identity = 154/412 (37.38%), Postives = 224/412 (54.37%), Query Frame = 0
Query:   18 LVALQGIRTAGAQNAMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKII-VEQYSGYD-------NPNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVP------------PEQQARLVPHRL---HQTTPPAV--GRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYESPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSLLD 405
            ++ALQG   AG    +P A+PEEV +S +  A+++  + +    RK+ G+I ++AR G+I+  E Y   D         + I R +S SKPIT  A +   D+    LD+P+  ++PE K L+V          Q V   R++T+R L+ HTSG  YG  G+S VD++Y+  +++    +DL+  + KL  +PL+ QPGT W YSV  DVLG ++++ S    DVF QE +F+PL M DT F VP            P  +   V  +    H   PP+   G GGLVSTARDYM F  ML+N G L G RVL  ++V  M  +QLP  +     G      + FG  +++Q          GE GWGGAAST+FW  P  D  +VA++Q+ PF   L   V+P+VY +++D
Sbjct:    1 MLALQG--WAG---EIPRAKPEEVGMSDERLAKVKSKIQEMVDDRKIAGAITVVARRGRIVHFETYGLRDLDENMPVEKDTIMRFYSMSKPITTVAAMTLYDESRLKLDEPVEKYVPELKGLKVYHAA------QPVEPDRKVTVRDLMRHTSGLTYGIFGNSPVDQIYKKERIIG--SRDLQSMVEKLGRIPLMHQPGTRWHYSVSTDVLGCLVEKVSGRKLDVFFQERIFRPLDMRDTAFFVPKAKVDRFSSCYSPGSEGLKVKEKFNASHYLMPPSFLSGGGGLVSTARDYMRFCQMLINKGELFGARVLKAETVDMMTKNQLPQDVY---WGG----KNGFGLGFSVQTQGGGSTAHVGEYGWGGAASTHFWISPRDDLAVVALSQLMPFSPQLQNAVKPLVYEAIVD 392          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: WP_019110661.1 (MULTISPECIES: hypothetical protein [unclassified Verrucomicrobia (miscellaneous)])

HSP 1 Score: 255.8 bits (652), Expect = 3.400e-64
Identity = 152/401 (37.91%), Postives = 215/401 (53.62%), Query Frame = 0
Query:   32 AMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDN--------PNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLVPHRLHQT-----------------TPPA--VGRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYE---SPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSL 403
            A+P + PEEV +SP++ A+I P L++    +KL G  V+I R GKI+ ++  G+ N         + IFR++S +K IT+AA L+  ++    LDDPIT F+PEF  L V             P +   TIR LL HT+GF YG GG   VD  Y   + LD  D+ L      + G PLL QPGT W Y +  D+LG +I+ AS  ++D FLQ+  F PL M DTGF VP E+  RL    ++QT                   PA   G GGLVST  DY  F  M+ NGG   G+R L  D+V  M T+QLP  +    +G   +  + FG  ++++ A +   + +   GE GWGG AST++W  P+   V+V M Q  P+   L   ++PIVY+++
Sbjct:   47 ALPVSTPEEVGMSPEVLAKIDPALEELIEKKKLAGGSVLILREGKIVYQKQFGHANRAAKVPMKKDTIFRIYSMTKAITSAAALMLYEEKKLNLDDPITRFLPEFALLNVW-----QRRGDPTPAKPMPTIRDLLRHTAGFSYGWGGHP-VDRYYGRFQPLDR-DKTLAEMSRSICGAPLLFQPGTRWHYGINTDILGRVIEVASGQTFDAFLQQRFFAPLGMSDTGFYVPAEKANRLAD--VYQTKGFFLTNSEPGKASPFLKKPANLSGGGGLVSTINDYARFLQMIANGGNFQGKRYLKADTVKLMTTNQLPDEIASISLGEQRY-GTGFGLGFSVRIAPDKRWAKDAAIGEYGWGGMASTHYWISPKDKLVVVTMEQTLPYNWNLERLLKPIVYQAI 437          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: WP_050044383.1 (hypothetical protein [Verrucomicrobia bacterium SCGC AAA168-F10])

HSP 1 Score: 255.8 bits (652), Expect = 3.400e-64
Identity = 152/401 (37.91%), Postives = 215/401 (53.62%), Query Frame = 0
Query:   32 AMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDN--------PNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLVPHRLHQT-----------------TPPA--VGRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYE---SPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSL 403
            A+P + PEEV +SP++ A+I P L++    +KL G  V+I R GKI+ ++  G+ N         + IFR++S +K IT+AA L+  ++    LDDPIT F+PEF  L V             P +   TIR LL HT+GF YG GG   VD  Y   + LD  D+ L      + G PLL QPGT W Y +  D+LG +I+ AS  ++D FLQ+  F PL M DTGF VP E+  RL    ++QT                   PA   G GGLVST  DY  F  M+ NGG   G+R L  D+V  M T+QLP  +    +G   +  + FG  ++++ A +   + +   GE GWGG AST++W  P+   V+V M Q  P+   L   ++PIVY+++
Sbjct:   47 ALPVSTPEEVGMSPEVLAKIDPALEELIEKKKLAGGSVLILREGKIVYQKQFGHANRAAKVPMKKDTIFRIYSMTKAITSAAALMLYEEKKLNLDDPITRFLPEFALLNVW-----QRRGDPTPAKPMPTIRDLLRHTAGFSYGWGGHP-VDRYYGRFQPLDR-DKTLAEMSRSICGAPLLFQPGTRWHYGINTDILGRVIEVASGQTFDAFLQQRFFAPLGMSDTGFYVPAEKANRLAD--VYQTKGFFLTNSEPGKASPFLKKPANLSGGGGLVSTINDYARFLQMIANGGNFQGKRYLKADTVKLMTTNQLPDEIASISLGEQRY-GTGFGLGFSVRIAPDKRWAKDAAIGEYGWGGMASTHYWISPKDKLVVVTMEQTLPYNWNLERLLKPIVYQAI 437          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: PHR96624.1 (serine hydrolase [Blastopirellula sp.])

HSP 1 Score: 251.1 bits (640), Expect = 8.500e-63
Identity = 153/425 (36.00%), Postives = 219/425 (51.53%), Query Frame = 0
Query:    8 YKAVLFLLSSLVALQGIRTAGAQNAMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDN--------PNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLV----------------PHRLHQTTPPAV--GRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYE--SPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSLLD 405
            Y+   +LL SL+++    +A A   +P   PE V +S    A I  V+D+    ++L G IV+IA+ GKI+     G  +         + I R +S SK IT  A ++  D+G   LD PI+ ++PE K ++V     S   M+T   +R+IT+R L+ HTSG  YG  G+  VD+ Y+   +L+  D DL     KL+ +PL+ +PG +W YSV  DVLG +++  SQ   D F QE +F PL M DTGF VP  +  R                  P        P +  G GGLVSTARDYM F  M+  GG L G RVL+  SV  M   QLP S+   K G  V     FG  ++I+       P    GE GWGGAAST++WA P+ D +++ + Q  P+       ++ I+Y ++ D
Sbjct:    3 YRFTSYLLLSLLSISVPYSASAAE-IPSVSPESVGMSATKLAEINKVMDKLVADKRLAGGIVLIAKDGKIVHRSTHGLMDIEANKPMTKDAILRFYSMSKAITTTAAMILYDEGKLELDAPISKYLPEMKQVKVY----SKDGMKTP--KREITVRDLMRHTSGLNYGSSGNPAVDQPYKKADVLNR-DTDLAAMTTKLSQLPLVYEPGQDWMYSVSVDVLGRVVEVISQQPLDQFFQERIFIPLDMNDTGFYVPKGKANRFAANYNSNSKGKLTLKDDPTESRYLKNPKLFSGGGGLVSTARDYMRFLMMISEGGQLQGTRVLSKKSVKMMTRDQLPKSVPDIKFGENVRTGVGFGLGFSIRTEMSDWDPQGRVGEYGWGGAASTHYWASPKDDLIVIVLEQTMPYSFMTEFALKGIIYDAIED 419          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: WP_099899848.1 (serine hydrolase [Methylobacterium frigidaeris] >PIK74189.1 serine hydrolase [Methylobacterium frigidaeris])

HSP 1 Score: 249.6 bits (636), Expect = 2.500e-62
Identity = 149/402 (37.06%), Postives = 209/402 (51.99%), Query Frame = 0
Query:   38 PEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYD--------NPNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKM-LDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLVPH------------------RLHQTTPPAVGRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDF---GFAWAIQNAYESPNE----IAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFN-GLAENVRPIVYRSLLD 405
            PE V +S +   RI P +  +  + KLPG  V +AR G+++  + +G          + + I R++S +KP+T+ A L+  ++G F LDDPIT F+PEF+N+RVLV G S A  +TVP  R IT R LLTHTSG  YG    ++VD MYR   +     +  L   +AK AG+PLL QPG EW YS+  DVLG ++   S   +D FL+E + +PL MVDT F VPPE+ AR   +                  R  +      G GGLVSTA DY  F   +L GG L+G R+L   +V  M  + L   +    MG   F  S +   GF   +    +          GE  WGGAAST FW  P  D  ++ +TQ+ P     +   +R + Y +L++
Sbjct:    8 PEAVGLSSERLERIVPWMRGYVEAGKLPGLSVTVARRGQVVFSRSAGLRDLARGLPMDDDTIVRIYSMTKPLTSVAILMLYEEGRFQLDDPITRFLPEFRNMRVLV-GGSRAKPETVPAERDITFRDLLTHTSGLTYGFMDATLVDRMYREEGVDFQTAETSLADVVAKAAGLPLLAQPGAEWNYSIATDVLGHLVAVISGQPFDAFLRERIIRPLGMVDTDFHVPPEKIARFASNYALGEGGRLTLIDDAREGRYAKPRSVPSGGGGLVSTASDYARFCRFMLGGGALDGVRLLGRKTVALMTANHLRGDLA--DMGQPRFSESSYSGIGFGLGVSVMLDPAKAQILGTPGEVAWGGAASTAFWIDPAEDLFVILLTQLMPSSTWPIRRELRVLTYAALIE 406          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: WP_008702144.1 (hypothetical protein [Rhodopirellula maiorica] >EMI18047.1 beta-lactamase [Rhodopirellula maiorica SM1])

HSP 1 Score: 247.7 bits (631), Expect = 9.400e-62
Identity = 136/386 (35.23%), Postives = 211/386 (54.66%), Query Frame = 0
Query:   29 AQNAMPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQ-YSGYD-------NPNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLVPH-----------------RLHQTTPP-AVGRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYE--SPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPF 387
            A   +P A   +V +SPD   ++   + +     ++PG IVMIARHGK+++ + Y   D        P+ I R++S SK IT AA L+  + G   +DDP++ ++PE K++ V   G      +T P ++ +TI  L+ HT+G+ YG  G+S+ DE ++ + ML   D  LE    KLA +PL+ +PGT+W+Y +  DVLG +I+  S  +   FL + +F PL M DT F VP ++  R   +                   + T+P    G GGLVSTA DYM F  M+  GG  NG R+L+ ++V  M T+Q+P S+   K G        FGF ++++ +     P+   GE GWGGAAST++W  P+ + V++ + QI P+
Sbjct:   47 ATTPLPSADAADVGMSPDALRKVDAAMQESIDQNRIPGGIVMIARHGKVVMHKAYGKMDLEADKPMKPDTIVRIYSMSKAITTAAALMLYEDGKLDVDDPVSKYLPELKSVMVAADG------ETHPAKQTMTIADLMRHTAGYTYGRSGNSLHDEAFKELDMLQR-DDSLEAMQTKLAKLPLVFEPGTDWQYGISIDVLGRVIEVVSGETLGDFLHKRIFDPLEMKDTDFFVPADKVDRFAANYNTDGKGKLTLGDAASESPYLTSPEFESGGGGLVSTAEDYMRFLLMIAAGGEFNGTRLLSPETVALMTTNQVPESVGWIKFGKEARGGVGFGFGFSVRESMSDWDPDGRVGEYGWGGAASTHYWVSPKDNLVVITIEQIMPY 425          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: WP_006991807.1 (serine hydrolase [Paraglaciecola mesophila] >GAC23656.1 beta-lactamase [Paraglaciecola mesophila KMM 241])

HSP 1 Score: 244.6 bits (623), Expect = 7.900e-61
Identity = 139/396 (35.10%), Postives = 219/396 (55.30%), Query Frame = 0
Query:   38 PEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDN--------PNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARL----VPHRLHQTTP------------PAV--GRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYESPNEIA--GEAGWGGAASTNFWACPETDTVIVAMTQIAP-FFNGLAENVRPIVYRSLLD 405
            P+ V +S     RI+P +  F   +KL G++ ++AR GK++  +  G+ +         + IFR++S +KPITA A L   ++G F +DDP++ ++PE  NL+V   G  G NM      + +TI+ L TH++GF YG    S VD++Y+   +    +   E  + ++A +PL  QPGT+W YS+G D++G +++R S  +   + ++H+FKPL M DTGF VP  +Q RL    V ++  QT P            P +  G GGLVST  DY  F  MLLNGG   G+R+L   +V  M T+ LP  ++PF+  S       +G A ++    +  N +   G+ GW GAAST F   PE   +++AMTQ+ P  F    ++ + + Y++L+D
Sbjct:   30 PKRVGMSEARLERIEPAMQAFVDEQKLAGTLTLVARKGKVVHLEGVGFRDREAKTPMTEDTIFRIYSMTKPITAVAALTLWEQGQFQMDDPVSKYLPELANLKVFA-GMDGENMVLEDTNKVMTIKQLFTHSAGFSYG-FSQSPVDKLYQQSALFS-GETKREDLLKEVAKLPLNHQPGTKWNYSIGTDIIGVLVERLSGQTLGEYFEQHIFKPLKMTDTGFYVPKSKQDRLAQIYVINQQGQTVPMENEPLGDYLSAPEIESGGGGLVSTIEDYYTFTQMLLNGGEYKGERILGRKTVEYMRTNHLPADLIPFEPSS---TGEGYGLAMSVTVDEQGANTMGSKGDYGWAGAASTYFRIDPEEQMIVIAMTQLMPSSFFSYNKDFKNMAYQALVD 419          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: KPK34500.1 (hypothetical protein AMJ65_18255, partial [Phycisphaerae bacterium SG8_4])

HSP 1 Score: 244.6 bits (623), Expect = 7.900e-61
Identity = 137/332 (41.27%), Postives = 182/332 (54.82%), Query Frame = 0
Query:   91 IFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVP------------PEQQARLVPHRLHQTTPPA------VGRGGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYESPNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSLLD 405
            +FR++S SKPIT  A ++  ++G  GLDDP++ +IP+FK L+V V       + TVP  RQ+T+R L+ HTSG  YG  G++ VD++YR    L      L+   AKL  +PLL QPGT+W YSV  DVLG I++ AS  S D F    +F+PL M DT F VP            P  Q  L P    +TT  A       G GGLVSTA DYM F  MLLN G L   R+L   +V  M  +QL     P   G         GF+  ++++ E P    GE GWGG AST+FW  P  +  +V +TQ  P+ N   + V+PIVY ++LD
Sbjct:    6 VFRIYSMSKPITTVAAMMLCEEGKIGLDDPVSKYIPDFKGLKV-VTDPRDEQLATVPAERQMTVRDLMRHTSGLTYGIFGNTNVDKLYRKSIQLGGGRTTLKEMTAKLGKIPLLYQPGTKWHYSVSTDVLGRIVEVASGQSLDTFFTTRIFEPLGMEDTAFYVPAEKMHRFATNYGPNPQGGLQPIDEPETTRYAKMPTFLSGGGGLVSTASDYMRFCLMLLNNGKLGQTRLLKGRTVRMMTRNQLGKQAYPIGSGRRSGVGFGLGFSVRVEHSDEDPASRVGEFGWGGMASTHFWISPRDEIAVVVLTQHIPYSNRAEDAVKPIVYEAILD 336          
BLAST of NO25G01470 vs. NCBI_GenBank
Match: OUV12773.1 (hypothetical protein CBC46_07905 [Verrucomicrobiaceae bacterium TMED86])

HSP 1 Score: 244.6 bits (623), Expect = 7.900e-61
Identity = 139/400 (34.75%), Postives = 217/400 (54.25%), Query Frame = 0
Query:   33 MPYARPEEVNVSPDIAARIQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDN--------PNYIFRLFSQSKPITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRRQITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAGMPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTGFVVPPEQQARLVPHRLHQ-----TTPPAVGR------------GGLVSTARDYMHFATMLLNGGVLNGQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYES---PNEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYRSLLD 405
            +P A+PE+V +S +  A+I P +++  + +KL G  V++ R GKI+ ++  G+ +         + IFR++S +K IT+AA L+  D+G   LDDPI+  +PEF++L V   G         P     T+R LL HT+GF YG GG + VD +Y+  K LD  ++ L      +A +PLL QPG +W Y +  DVL  +++ AS   +  FL+E  F PL M DTGF VP ++  RL      +     T  PA G             GGLVST  DY  F  M+ N G   G+  L  D+V  M T+QLP  +    +G   +  + FG  ++++ A ++    +   GE GWGG AST++W  P+ + VIV M Q  P+ + +   ++PI+Y+++++
Sbjct:   17 LPTAKPEDVGMSSEALAKIDPAVEKLIKQKKLAGGSVLVLRQGKIVYQKQFGFASRAAKKPLAEDTIFRIYSMTKAITSAAALMLHDEGKLKLDDPISKHLPEFESLTVWKGGAEPIKASPAP-----TVRDLLRHTAGFSYGWGG-TPVDRLYQKFKPLDR-NKTLSEMTRAVADVPLLYQPGKKWVYGINTDVLARVVEAASGKKFSTFLEERFFTPLGMTDTGFHVPADKADRLADVYAGKAGVLVTAEPAKGSPFLKSPAHQSGGGGLVSTITDYGRFLQMIANRGNFQGETYLKKDTVKLMTTNQLPKEIPAIILGQQRY-GTGFGLGFSVRTAIDNRWDKDARLGEFGWGGMASTHYWVSPKDELVIVTMEQTLPYNSNMERTLKPIIYKAIIN 408          
The following BLAST results are available for this feature:
BLAST of NO25G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21663.11.700e-6662.81beta-lactamase [Nannochloropsis gaditana][more]
KPJ75268.12.200e-6637.38hypothetical protein AMS14_03905 [Planctomycetes b... [more]
WP_019110661.13.400e-6437.91MULTISPECIES: hypothetical protein [unclassified V... [more]
WP_050044383.13.400e-6437.91hypothetical protein [Verrucomicrobia bacterium SC... [more]
PHR96624.18.500e-6336.00serine hydrolase [Blastopirellula sp.][more]
WP_099899848.12.500e-6237.06serine hydrolase [Methylobacterium frigidaeris] >P... [more]
WP_008702144.19.400e-6235.23hypothetical protein [Rhodopirellula maiorica] >EM... [more]
WP_006991807.17.900e-6135.10serine hydrolase [Paraglaciecola mesophila] >GAC23... [more]
KPK34500.17.900e-6141.27hypothetical protein AMJ65_18255, partial [Phycisp... [more]
OUV12773.17.900e-6134.75hypothetical protein CBC46_07905 [Verrucomicrobiac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004270NSK004270Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01470.1NO25G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|218226gene_8749Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101157g1gene8767Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01470.1NO25G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01470 ID=NO25G01470|Name=NO25G01470|organism=Nannochloropsis oceanica|type=gene|length=4286bp
ATGGGGGCCGCCACATGGACCTACAAGGCGGTGCTTTTCCTCCTCTCCTC
CCTCGTCGCCCTTCAAGGCATCCGCACCGCCGGAGCTCAAAATGCCATGC
CCTACGCCAGACCTGAGgtacgtctcagatagaaatcagcaagcaaagga
caaggagggtgccgattgagggacgaacccaacaggagagccgtaaagag
ggaagggaggaaggagggaagatgagtgggacggtacagagcggcaggcc
gttttgatgcgaggtggtttcacccccagccctatcatggcgatcgaatt
ttcctacaattttcctctcacattaattgtacggccatatgcagagacaa
ccgacgtctttccccctccctttcccatctgcttgcccgtcctccctccc
tccctctctccgtctcttctccctgtgccacaataccaaccacatatcta
ccacgaaccaatgtttaacgacacagGAGGTCAATGTCAGCCCAGACATT
GCTGCACGCATCCAACCAGTGTTAGACCAGTTCACCCGCTCTCGCAAGCT
GCCTGGCTCGATTGTGATGATCGCGAGgtgaggaagggcagggagaaagg
aatggttattttgtatcccgttttggcatctttcacaccagcacgcattt
ctctttatttccttttccttgcacggcggaaatgccagggagcgtcactt
gagctacgacgatgtccatcacaccttccgcctcttctcccaatccacgc
taaccctccctccctccctttctcactccctccctcccatccacagGCAC
GGCAAGATTATAGTAGAGCAGTATTCAGGCTACGACAATCCTAATTACAT
CTTTCGCCTCTTCTCTCAGTCCAAGCCTATAACTGCCGCCGCCACTCTGG
TCTGTGTCGATAAAGGTCTTTTCGGATTGGACGATCCCATCACCAACTTC
ATCCCCGAGTTCAAGgtccgccctccctcccttcctcccttcccccctcc
ctttcttgtctcgctaccatcacaattgtatatatgtgcgtttgtatacc
catatgaatggttctatgtccttacacttctttatccccgtacctctcag
AACTTGCGCGTCCTTGTGCCCGGCACCAGCGGCGCCAACATGCAGACTGT
GCCCCTTCGACGACAAATCACGATACGACACCTCCTCACGCATACATgta
cgaccattctctccctccctcgctccctccctccctcgctccctccctcc
ctccttccctatctccgtaccccaagctctgactcccctccctcccctcc
ctccccttcctctctcccttcctctagCCGGCTTCGTCTATGGCGATGGA
GGTGATTCGGTGGTGGATGAAATGTATCGGTCGGTCAAGATGCTGGATCT
GTGGGACCAAGACCTGGAGGgtgagtgatgaggagggagggagggaggga
gggagggagggagggagaggggatgcttgcccttcatcaatactcttttc
gaatgattcgcctgtgtctgacatcattattttccttcccttccctccct
ccctctctccttcttgttgctccaacagGCTTCATAGCCAAGCTGGCCGG
TATGCCCTTGCTCACGCAGCCTGGAACAGAGTGGCGGTACTCCGTCGGCT
TCGATGTGCTTGgtagatatctccctccctccctccctccctccctccct
ccctccctcccctcctcccttccttttctccgtctctcgcctctcaccct
ccctccctccctcctttcccagGCGCCATCATCCAACGTGCGTCCCAGAT
GTCCTATGACGTCTTTCTCCAAGAGCACCTCTTCAAGCCCCTCTCCATGG
TGGACACCGGCTTCGTCGTCCCTCCTGAGgtaggccctctccccctcccg
ccctcactgccttttctcccttgctgtggcaacaataagcacgtttgacg
agggagtgggcatctactgctgctgttactgcgcttactcctcctgctgc
taccgttgctgctgctgctgctgtcgctgctactgctgctacggcttcca
ctactgccgatttcctctttccgtcgtatatacagccatccaaatggatt
tcaccgaccagccgcagccgtcctcgcccataagagaaacccaccccctc
cctccctccctccctccttccctccctctcacccccggcacagCAACAAG
CCCGTCTGGTGgtgtattggacctcccttgcggcacctggcatgctggtg
cccattcctttcatgtacagCCACACCGACTTCACCAAACGACCCCGCCT
GCTGTCGGGAGGGGGGGGCTGGTCAGTACGGCCCGGGACTACATGCATTT
TGCCACCATGCTCCTCAATGGGGGGGTGCTAAACGgtacggaaggaggga
ggaagtgacggagggagggagggagggagggagggagggagggagaccgg
cgttgcatacaccgtcacccccccacacgcacctcttttatggcgtgctt
attctggccattcgtcctttcctccctccctccctccctccctccctccc
ttcctcctcgttagGCCAGCGTGTCCTAAATCTTGATTCGGTGATCGAAA
TGTGGACTTCGCAGCTCCCTCCTTCCATGATGCCTTTCAAGgtacgacct
ggccctccctccctccctccttccctcctttcctccctcccttcctcttc
ttattcccagcctcctcctctcccgtcctctcttgcttcacttctttctt
ccagtctcgtttgattgcttactttcctccccccctttctctctccctcc
ctccctccctccctccctccctttcgaagATGGGATCCATCGTCTTCAAG
AGCTCGGACTTCGGCTTCGgtacgagggcgagaaggaggggtggagggag
ggagggcgagaaggagggcaggggagggagatggggcaagggcggtaaag
agagagggcagggagaagggtggaatgagcaaagagaatatgggagctaa
cctccagctgcccattcatttaacacatatccgaccgcacctctcccccc
ttccttccctccctccctcccaccctccttctccagCCTGGGCGATTCAA
AACGCCTACGAGTCTCCAAATGAAATCGCGGGAGAAGCTGGGTGGGGCGG
CGCAGCCAGCACCAACTTTTGGGCCTGTCCGGAGACGGATACTGTCATTG
TCGCCATGACGCAGgtagggagggagggagggagggagggggagggggtg
gaagcaagccgcgatcatggtgttgaaatatcaccctccccatgccttga
cccttggagctttcgttctcccctccctcccttcctccctcccttcctcc
cttcctccctcccttccttcctccctcttccagATCGCCCCATTTTTCAA
TGGCCTGGCCGAAAACGTCCGTCCTATCGTGTACCGCAGTCTCCTTGACT
GGCACCAGCCTCCACCCATGACGGTCAATCCAAGTACTCCCGCAGGGCCA
Agtaagagggagggagggaggaagggagggagggagggaggagtgagagc
gacagcgctactttctagccgttagattttgtctttccccccacacgtac
ctttcccctcccccctccctctctctcttatttgtagACCAAATGCGGAG
CAATGGCGGTCCCTCAGAAAAGCAAGCGGCTAAGCGCGGCATTGGCCCCT
TACCGGAAGGGGGAGGGATAGACACTCAGCAGCAGCAGCAGCAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAAACAACAACAACAAC
AACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
CACAAGGACAACAACAACAACAACCACAAGGACAACAACAACAACAACCA
CAAGGACAACAACAACAAGAGCAAGAGCAACCGCCGGAGCCACCTAACCA
GGAGGGATCTCAGGAGCATCCTCCCACTGATACTACTCCTGATGATGGTG
ATACCGATGCTGATGCTGACGCTGCAGCCGCGGCTGCTGCTGCTGCCGCG
GCTGCTGCTGCTGCTGCTCAACAGAATACACCTTCCAAGAAACCAAAACG
AGGTCCACCTCCAAGAGGCACATGGGGCTCGATAGTGGGAGGAGCAATGG
TAGGGAGGTTGCGATAGAGGGCAGGAATAACTGAATGACATGACTGGAAA
TATTCAAATGACGCGAAATGAAGGAGAGGAGGAGGG
back to top

protein sequence of NO25G01470.1

>NO25G01470.1-protein ID=NO25G01470.1-protein|Name=NO25G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MGAATWTYKAVLFLLSSLVALQGIRTAGAQNAMPYARPEEVNVSPDIAAR
IQPVLDQFTRSRKLPGSIVMIARHGKIIVEQYSGYDNPNYIFRLFSQSKP
ITAAATLVCVDKGLFGLDDPITNFIPEFKNLRVLVPGTSGANMQTVPLRR
QITIRHLLTHTSGFVYGDGGDSVVDEMYRSVKMLDLWDQDLEGFIAKLAG
MPLLTQPGTEWRYSVGFDVLGAIIQRASQMSYDVFLQEHLFKPLSMVDTG
FVVPPEQQARLVPHRLHQTTPPAVGRGGLVSTARDYMHFATMLLNGGVLN
GQRVLNLDSVIEMWTSQLPPSMMPFKMGSIVFKSSDFGFAWAIQNAYESP
NEIAGEAGWGGAASTNFWACPETDTVIVAMTQIAPFFNGLAENVRPIVYR
SLLDWHQPPPMTVNPSTPAGPNQMRSNGGPSEKQAAKRGIGPLPEGGGID
TQQQQQQQQQQQQQQQQQQQQTTTTTTTTTTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNHKDNNNNNHKDNNNNNHKDNNNKSKSNRRSHLTRRDLRSIL
PLILLLMMVIPMLMLTLQPRLLLLPRLLLLLLNRIHLPRNQNEVHLQEAH
GAR*
back to top
Synonyms
Publications