NO25G01350, NO25G01350 (gene) Nannochloropsis oceanica

Overview
NameNO25G01350
Unique NameNO25G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length684
Alignment locationchr25:382965..383648 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:382965..383648 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01350.1NO25G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100012g3gene8779Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01350.1NO25G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01350 ID=NO25G01350|Name=NO25G01350|organism=Nannochloropsis oceanica|type=gene|length=684bp
ATGCAGGCGATTACCAAAGGGACCCGCGTCCTGCTTTGCGTCCTCCTCCT
CCTGCTCCTTGACACTGTCTTGCGCACCCGTGCCGCCTTGCACCGCCCTC
ATTTGGTGCCGTCCCACTTGAAATCGACTCCATCGTCGTCGTCTTCGCGG
AGAAGGGAGATTCCGAGGAACAGTTGGTATAGCACCGTCAGAGGAGGAGG
AGGAGGACTTGGCGGGCAAGCAGCAGAAGCAACCAAGGAGAGGAGACGAA
GCCTTGCAGTAGCGGCAGCAGCAGCCACAGATGGGAAGATTGGAAAACAC
AAGGTCGGGAGAGGAGAGGAGGAAGAGGAAGGAGGATATTGGACGCAAAT
TTTCGCGCCCCGCAAGAGCAATAACAGCAACGCGGACAGAAGCAGCAGCA
GCAGCAGCGGCGGCACGGGTTGCGGCCCTGCAAGTGGGGAAAGTAGCCGC
GGCAAAAGCGAAGGAACGAAAAGCGGCAGCAAAGGCGATGGGGGGCAGCA
AGAGGACGATTTTTACGAGGACATGCGGGAGTATTTCAAGTCCATGACGC
CCTCCCCCCTTCCTCCTCTTCCAGTAGCCGGAGGCCTGACGGTACACCAC
CATCACCACCACTACCACCCCCTCCTCCTGGGCGCAACAACAATGATAGC
ACCTCGTCCCTCCATCCTTCTCCCAGCAGCATGA
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protein sequence of NO25G01350.1

>NO25G01350.1-protein ID=NO25G01350.1-protein|Name=NO25G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bp
MQAITKGTRVLLCVLLLLLLDTVLRTRAALHRPHLVPSHLKSTPSSSSSR
RREIPRNSWYSTVRGGGGGLGGQAAEATKERRRSLAVAAAAATDGKIGKH
KVGRGEEEEEGGYWTQIFAPRKSNNSNADRSSSSSSGGTGCGPASGESSR
GKSEGTKSGSKGDGGQQEDDFYEDMREYFKSMTPSPLPPLPVAGGLTVHH
HHHHYHPLLLGATTMIAPRPSILLPAA*
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Synonyms
Publications