Naga_100012g3, gene8779 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100012g3
Unique Name	gene8779
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037251.1:205862..209822 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100012g3
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037251.1	supercontig	KK037251.1:205862..209822 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL073	ngnoL073	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO25G01350	NO25G01350	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna9052	rna9052-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna9052	rna9052	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna9052

>rna9052-protein ID=rna9052-protein|Name=rna9052|organism=Nannochloropsis gaditana|type=polypeptide|length=1117bp
MHKGHRGDRIDRVTTLRCIMRRFVSSRCWCWRKAKAMGSGLPFLLVLFIY
FLESHPTQAITRNSRVVVSHLQATPSLSPSLTVRFVREKKCMPWCHGVRG
GGLDGRRVATSTRAKEGGKAVPPNPPSAGNEKARAGPKENTEADTRRYWS
HVIPTWKGGGADQGGSPREGNREEKCSNGHKGDGSQNTQPSLRQEDDFFE
DMKEYFRSMTPSPPPQDHDGGRHPPFSSPTGNNTNPASTPQAPLSGTKTQ
PGPLSQGTGLTDPLLLDRVLAGVTAAALALPGLLRVRVAVVGKFLWRIAS
YKFPVALGAYACAALLARWTVGKVQGMWRRRPVRDMHLDSADRDYERYGV
ILQREAHEYFKYLPASVSSSPSPSSGAKSSQTGMLQLLTAALELPCLLTR
RDEYVQSLSKAVTELSHAQSPPSFPPSVLPSPAASPLVAALRTDSLSSNT
SLPPSLPPSLRQPLASLPVVDQGQIILSVRLGDATARLARDALLGSARKV
QAAHRYWHARYKPRRGWKRRQQAAKRAEAYAAYSGLGLFGGGEGGGGGGW
FSFPRQAEKEEGKEDGGEEGEEETTEALTVAAEEVGGQEGVSDPGSRREA
HRVAELDARLKEHMERIGSLEAHLLSRPEQAGGWSVGDAVRWSCVAVALA
EAAMEEVGRPVRRAEERWWRGEREGGGEGGVEGGGGEKVWRAVKQGVGDA
VHEMGRRLREGGRSRDKEAVEEGKAGEEGSTPAMAPEDSPSVPSDAAPAP
PSPVNWANLGARASLTIGHALTLRNRVASHLETHDLDRPKMNEWLAWTLR
GAAYVFFLRTTAELWSRRESIQATAALTKKNTEEFLAYRFLEPGKAILED
LILNKRQRLTDEGAITDAQASLRRMLSDFIDDTYPHIDPATKKAALEAMD
ISLVSAQYDKEIRHAVRNVFSGKIVRMLLIQMQYVKKELLVAMEAIDDLY
NANKVNLQAFAVVPALLLTYCAYRMSLYLFGALASRRISNISGVHASLRR
TLRDLERLLILAPRLPPSVTPSLPSSLGAKTTVLDDRRLGEVVLLVADFQ
NILRVNAPRLEKGVRRALMEDMSDLLGGPGRLTVEQQLTSLNRVRKAYAF
LQSRTPGGGAALFDILA

Synonyms

Publications