NO25G01260, NO25G01260 (gene) Nannochloropsis oceanica

Overview
NameNO25G01260
Unique NameNO25G01260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4415
Alignment locationchr25:352442..356856 -

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Properties
Property NameValue
DescriptionAlpha-actinin-4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:352442..356856 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Homology
BLAST of NO25G01260 vs. NCBI_GenBank
Match: EWM21623.1 (alpha-actinin-4 [Nannochloropsis gaditana])

HSP 1 Score: 614.8 bits (1584), Expect = 3.600e-172
Identity = 405/761 (53.22%), Postives = 486/761 (63.86%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEQRLASYYAFKGQVDVYESLLKESQRLLSGHLSEEHAGVGETHDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERYVLLAGKVGFVIDEVEEAIAEPILGNSVEEVEELEERFXXXXXXXXXXXXXXXXXSRVGEFLTKHGRVERVEEERQATPPAVLLATVQKVEKRIEEHIAELERAREETRRKVRVREEFAEAARGLNAWVQQLSERSNLGGRRSSLQPQDVTKELEALRDEYEMGGRERGRMMVVEEASEAQEAAGVVANGFVTDTVYSLRKEYEELGKLIEARLNDSVTAQAMLMSQTAESDEQMKEVLRVFQVLTTAATVVGEGEREEGGRXXXXXXXXGEGGCLTQKAFKEGLQALGVVLEDSEADVQYKKVVGGXXXXXXXXXXXXXXXXXTLAEFSSFVTTALTAGSSREDILGAFKTIATSMGQGRXXXXXXXXXXXXXXXXXXXXXXXXXNLVFEAQGDCVAYMKEHMPETGVEKLKKR---------XXXXXXXXXXXXXXXXXXXXXXVPVYDYMSFVSYIFER 753
            MIAYLSQFFNKFASLTRKQALV+SIVKA+ +ARKHD LLS Y   S  LK WL+ RT +W+     GRTT +VKA+LDALH YR+EEKVQQKA+LL +T +LGQLR SQR++NRP++ P  GM D+ LW+ DWPALEAAEG YEKA I+KYA FSVIDFALTKVQNKLSK+EPWL+SRT++FT+                               LEQRL+S+ AF+ QVDVYE+LL ES+RLLSG LSEEHAGVG T  RVAVA  TM  LK+ A+ FKV VE  L+LEK+LE AA RYV LA KVGFV+DEVEEA+AEP+LGN+VEEVE LE RF                 + +   L +HGR +RV EERQ T PAVLLAT  +V + + +H                               VQ+L+E+SNLGGRRSSLQP++V  EL++L+  Y+  G  +  M  VE AS  QEAAGVVANGFVTDTVYSLRK YE+LGKL+EA++ D +TA+A L+SQTAES+EQ KE+ RVF  L            EE  R           G LT KAFKEGLQALGV+LEDSEADVQ++KV G                  TLAEF S VT ALTAGSS +DI+ AFK I+ S  +                              F   GD   Y++ HMP+ G + +K+R         XXXXXXXXXXXXXXXXXXXXXXVP+++Y SFV +IF R
Sbjct:  277 MIAYLSQFFNKFASLTRKQALVESIVKAVGVARKHDTLLSDYERESQELKTWLQARTRRWEALGGMGRTTEDVKAQLDALHVYRREEKVQQKAKLLRLTSVLGQLRGSQRNHNRPLYAPPPGMGDKDLWEEDWPALEAAEGRYEKACIEKYAGFSVIDFALTKVQNKLSKLEPWLESRTSYFTT-ALPRPPVKGSDGGEDENGECKSALVVSIPSLEQRLSSHAAFESQVDVYEALLSESRRLLSGELSEEHAGVGLTKGRVAVAAETMANLKDKAKDFKVGVEARLQLEKKLEHAANRYVTLAEKVGFVVDEVEEAMAEPLLGNNVEEVEALESRFSTVSATFQNLSPVMKELAELSALLIEHGRADRVGEERQTTAPAVLLATHVRVVEDVSKHTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQRLTEKSNLGGRRSSLQPEEVKNELKSLQAIYD--GEGKTLMASVESASAEQEAAGVVANGFVTDTVYSLRKAYEDLGKLLEAQITDCLTAEAALLSQTAESNEQWKEITRVFHAL------------EEEKR-----------GVLTAKAFKEGLQALGVLLEDSEADVQFRKVGG-----------KEKVNGMTLAEFGSVVTAALTAGSSSDDIMAAFKAISLSETE-------------KEEGKEGLISGEVIKASFAGHGDIAEYIEAHMPQKGTKVVKRRRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPMFEYASFVHHIFAR 987          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: GBG26612.1 (Alpha-actinin-1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 154.1 bits (388), Expect = 1.800e-33
Identity = 153/656 (23.32%), Postives = 284/656 (43.29%), Query Frame = 0
Query:    2 IAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEQRLASYYAFKGQVDVYESLLKESQRLLS-GHLSEEHAGVGETHDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERYVLLAGKVGFVIDEVEEAIAEPILGNSVEEVEELEERFXXXXXXXXXXXXXXXXXSRVGEFLTKHGRVERVEEERQATPPAVLLATVQKVEKRIEEHIAELERAREETRRKVRVREEFAEAARGLNAWVQQLSERSNLGGRRSSLQPQDVTKELEALRDEYEMGGRE---RGRMMVVEEASEAQEAAGVVANGFVTDTVYSLRKEYEELGKLIEARLNDSVTAQAMLMSQTAESDEQMKEVLRVFQVLTTAATVVGEGEREEGGRXXXXXXXXGEGGCLTQKAFKEGLQALGVVLEDSEADVQYKKVVGGXXXXXXXXXXXXXXXXXTLAEFSSFVTTALTAGSSREDILGAFKTIA 654
            +AYLSQFF  FA   + ++ + ++  A+ + R+HD  ++ Y   S  ++ ++ +   +++        T +VKA LD  +TY    K +  ++  E   +   L +S+R+NNRP F  E   +D       W +LE AE +YE+ ++D+Y  + + D A+ K + K   +  WLD + A F                                 LE  L  + +++ ++ +Y+++++E + +++    SE HAGV +    +   +  M+T K   E  +  +E +L+ EK L A  + Y+    ++ F++D+++++++E I G +  E+ EL+ +                  S +   +       +    +Q +                   +A  +R  E ++R   +  EFA    G         +R+ LGG   SL   D  + +  LR   E+ G +     ++  +EEAS+A E A +VAN + T T++SLR  +E+L K ++ R +++++AQ M       S EQ+KE   +F V  T                          G L     +E     G+ L+D E + + +                      T  +F +F    L +G S++D++ AFK IA
Sbjct:  216 VAYLSQFFKLFAGQAKLESKLRAVKNAVAVTRRHDDWMNQYTQLSKEVQDFVSSNKSRFENAPALS-ATDDVKAALDDFNTYMNNVKPEMASKRAEAEGVYTTLVSSKRNNNRPEFSAEIPPADLG---AAWESLEHAEQSYERQMLDRYLSYRMADHAVAKFKAKSVAVNVWLDEKLAVFGEGVKGGSVSE----------------------LETELEMHASYESRLKLYDTVMEELRAIVAKAETSEGHAGVADASQGMRDLDEKMSTCKSQGESHRSALESALESEKALAAKDKLYLQKINELDFLVDQLDQSLSEDITGATTAEMTELQGQMGSIEQSVQAALTSVDEVSALAAEIESKRPDAKDHCAQQRSRIXXXXXXXXXXXXXXXXXLAAEQRRDELSQRFAGLANEFASFCDG---------QRAALGGVSGSL--DDQKEAIAKLRS--EVAGEDSAGAAKLAALEEASQACEEAELVANTYTTHTIFSLRSNHEQLLKDLK-RADEAISAQLMAQKSLQISPEQLKEAQEIFSVFDT-----------------------DNDGKLRLSELREACLGAGIDLDDQELESRMR--------------ARSSTMVFTQDDFIAFFVDELQSGDSKDDVVEAFKAIA 794          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_004360011.1 (alpha actinin [Cavenderia fasciculata] >EGG22160.1 alpha actinin [Cavenderia fasciculata])

HSP 1 Score: 83.2 bits (204), Expect = 3.800e-12
Identity = 75/339 (22.12%), Postives = 151/339 (44.54%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEQRLASYYAFKGQVDVYESLLKESQRLLSGHL-SEEHAGVGE-THDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERYVLLAGKVGFVIDEVEEAIAEPILGNSVEEVEELEERF 338
            ++ Y++Q+++ F++  + +A    + K + L    +Q+ S Y   +  L  W+  ++ Q  +  E G +   V+  +   + Y+  +K  +   LLE+  +   L+T  + N R  F P +G+    + D  W ALE AE  + +AL  +  R   I F L K    L K++ W+ S+ A+ ++                               ++ +L +  AF+G+    ++        +   L S E+ GV      R  + +G    +K  AE++K  + E L   +++E     +   A ++   I+  E+ +++PIL +SV+ V E++ +F
Sbjct:  223 VMTYVAQYYHYFSASRKAEAAGKQVGKILDLIMSLEQMKSDYLHRAQELVDWI-NQSVQKLESREFGDSVESVQQFIQEYNNYKNSQKPPKAQDLLELETIFNGLQTRLKLNKRDPFSPPQGLHPNDI-DQLWAALEKAEQDHSEALRRELKRQKQISFLLIKYNRILKKLDAWVSSKQAYLSA----------------------NELGDSITAIQAKLKNLEAFEGESQSLQAQSSADLDSIQNQLESLEYRGVPSLVERRTQLFQGPWEQVKTTAEQYKATLLEELSKLQKIEDMLVDFAKRAAQLNIWIESAEDLVSDPILADSVQVVNEIQGKF 537          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: GAY00455.1 (alpha-actinin-1, putative [Pythium insidiosum])

HSP 1 Score: 82.0 bits (201), Expect = 8.500e-12
Identity = 150/684 (21.93%), Postives = 271/684 (39.62%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFI---PEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEQRLASYYAFKGQVDV--YESLLKESQRLLSGHLSEEHAGVGETHDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERYVLLAGKVGFVIDEVEE--AIAEPILGNSVEEVEELEERFXXXXXXXXXXXXXXXXXSRVG--EFLTKHGRVERVE-EERQATPPAVLLATVQKVEKRIEEHIAELERAREETRRKV-----RVREEFAEAARGLN----AWVQQLSERSNLGGR--RSSLQPQDVTKELE---ALRDEYEMGGRERGRMMVVEEASEAQEAAG------VVANGFVTDTVYSLRKEYEELGKLIEARLNDSVTAQAMLMSQTAESDEQMKEVLRVFQVLTTAATVVGEGEREEGGRXXXXXXXXGEGGCLTQKAFKEGLQALGVVLEDSEADVQYKKVVGGXXXXXXXXXXXXXXXXXTLAEFSSFVTTALTAGSSREDILGAFKTIAT 655
            ++ Y+S  F +FAS  +K+  V +I KA+ +A++H  L + Y  ++S L  WL T+  ++Q   +  R  AE +  L     Y++ EK  ++A  + V    G+   S ++NNR I +   P E + +          L+  E  YE  L      F   +  L +V  +L K+E W   + +                                    E++L     F  ++++  Y+ LL        G LS E+A      +RV   +  +  +    E  KV++ ++L+ ++E++A  +   +L   + +VI+E++E   +A  +  ++ + V   +E F                   +   E L   GR   V   ++       LLAT +      E+ +A +ER R+E  RK      +++E +A++ + +N        Q S   +L  +  RS+    D  K  E      DE E+   E+    + E+               V AN + T+T++SLR ++  L   +  ++  S+  +  L      + +Q+KE+  VF                               G L ++ F    + LG+ L + E   Q+ KV                    +  EFS F    L +GSS+ED+  AF+ + T
Sbjct:  225 IMTYVSLLFKEFASGVQKRKAVTTICKAVNIAQRHQDLAAEYAQNASGLLEWLTTQVDRFQTQTQP-RRMAETRDSLAQHLEYKKNEKPPREAMYVAVEGCAGRWIASCKNNNREIPVLDPPVEKIQEMK------SRLDELETEYELRLRKSLEIFKKTEIFLARVVKELEKVEAWAKEKES--------------------SVLFEEGLLASTTAEAEEKLEG-VGFIQEIELPRYKHLLATVVEHSQG-LSPENAEAASAVERVEAMKAFVADVDGKIEDVKVKLLDALRAQQEVDAVVKDCKILMRNLKYVIEEMDEEVEVATRLNESTKDGVLAAKEHFENTLLPKVHQAVVSENEKLLSKREVLASAGRTADVALIDKMNARVERLLATCEDKRGLFEDELANVER-RDEVCRKFADLSGKLKERYAQSTQAINNVEGTLADQFSAMVSLRHKLFRSNTVNLDEVKHAEENGKTTDEAEVENAEKELASLAEDXXXXXXXXXXXXRLRVFANPYTTETIHSLRAQFVSLENAVRDKVK-SLEKEVALSKLGNLTPQQIKEIKEVFD-----------------------HFDLDHDGVLAREEFIMACKGLGLNLSEDECHDQFDKV------------DEDDNDEISFDEFSKFCGEQLQSGSSKEDVKVAFEILTT 842          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_015242491.1 (PREDICTED: alpha-actinin-4 isoform X1 [Cyprinodon variegatus])

HSP 1 Score: 79.7 bits (195), Expect = 4.200e-11
Identity = 51/186 (27.42%), Postives = 95/186 (51.08%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYR---QEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFT 184
            ++ Y+S F++ F+   + +   + I K + + ++++Q++  Y   +S L  W+R RT  W ++    +T  +++A+ +    YR   +  KVQ+K + LE++     L+T  R NNRP F+P EG     + +  W  LE AE  YE+ ++ +  R   ++    K   K +  E W D + A  T
Sbjct:  244 IMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIR-RTIPWLENRTQEKTVKDLQARQEDFRDYRTVHKPPKVQEKCQ-LEIS--FNTLQTKLRLNNRPAFMPSEGRMVSDI-NTAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAMLT 424          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_015242496.1 (PREDICTED: alpha-actinin-4 isoform X5 [Cyprinodon variegatus])

HSP 1 Score: 79.7 bits (195), Expect = 4.200e-11
Identity = 51/186 (27.42%), Postives = 95/186 (51.08%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYR---QEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFT 184
            ++ Y+S F++ F+   + +   + I K + + ++++Q++  Y   +S L  W+R RT  W ++    +T  +++A+ +    YR   +  KVQ+K + LE++     L+T  R NNRP F+P EG     + +  W  LE AE  YE+ ++ +  R   ++    K   K +  E W D + A  T
Sbjct:  244 IMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIR-RTIPWLENRTQEKTVKDLQARQEDFRDYRTVHKPPKVQEKCQ-LEIS--FNTLQTKLRLNNRPAFMPSEGRMVSDI-NTAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAMLT 424          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_009037294.1 (hypothetical protein AURANDRAFT_71718 [Aureococcus anophagefferens] >EGB07920.1 hypothetical protein AURANDRAFT_71718 [Aureococcus anophagefferens])

HSP 1 Score: 78.6 bits (192), Expect = 9.400e-11
Identity = 53/180 (29.44%), Postives = 93/180 (51.67%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEE----TGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLD 177
            ++ YL   + + + L  +Q  V SI++A+ L +KH +L   Y + + +L  W+      ++   E     G T+A++   + A   YR+  K  +K  L  +  +L  L  S  +N RP + P   ++ + L    W ALEA EGAYE ++   +ARF  ++  L KV+ K++K + +LD
Sbjct:  114 VMTYLCLLYIEISKLAVQQKAVKSILQAVELTKKHKELAESYETGAEALLEWIEATRSTYENVAEGASGHGDTSAKIGENMAAFVGYRRATKPPKKQELDALAGILATLSQSCENNFRPKYAPPAELAPELLAGA-WKALEATEGAYETSISASFARFVGLEELLGKVRVKMAKTDAFLD 292          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_015242492.1 (PREDICTED: alpha-actinin-4 isoform X2 [Cyprinodon variegatus])

HSP 1 Score: 78.6 bits (192), Expect = 9.400e-11
Identity = 51/186 (27.42%), Postives = 95/186 (51.08%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYR---QEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFT 184
            ++ Y+S F++ F+   + +   + I K + + ++++Q++  Y   +S L  W+R RT  W ++    +T  +++A+ +    YR   +  KVQ+K + LE++     L+T  R NNRP F+P EG     + +  W  LE AE  YE+ ++ +  R   ++    K   K +  E W D + A  T
Sbjct:  244 IMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIR-RTIPWLENRTQEKTVKDLQARQEDFRDYRTVHKPPKVQEKCQ-LEIS--FNTLQTKLRLNNRPAFMPSEGRMVSDI-NTAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAMLT 424          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_015242497.1 (PREDICTED: alpha-actinin-4 isoform X6 [Cyprinodon variegatus])

HSP 1 Score: 78.6 bits (192), Expect = 9.400e-11
Identity = 51/186 (27.42%), Postives = 95/186 (51.08%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYR---QEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFT 184
            ++ Y+S F++ F+   + +   + I K + + ++++Q++  Y   +S L  W+R RT  W ++    +T  +++A+ +    YR   +  KVQ+K + LE++     L+T  R NNRP F+P EG     + +  W  LE AE  YE+ ++ +  R   ++    K   K +  E W D + A  T
Sbjct:  244 IMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIR-RTIPWLENRTQEKTVKDLQARQEDFRDYRTVHKPPKVQEKCQ-LEIS--FNTLQTKLRLNNRPAFMPSEGRMVSDI-NTAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAMLT 424          
BLAST of NO25G01260 vs. NCBI_GenBank
Match: XP_020510718.1 (alpha-actinin-4 isoform X3 [Labrus bergylta])

HSP 1 Score: 78.6 bits (192), Expect = 9.400e-11
Identity = 53/188 (28.19%), Postives = 98/188 (52.13%), Query Frame = 0
Query:    1 MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLKGWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYR---QEEKVQQKARLLEVTKLLGQLRTSQRSNNRPIFIPEEGMSDQALWDVD--WPALEAAEGAYEKALIDKYARFSVIDFALTKVQNKLSKIEPWLDSRTAHFT 184
            ++ Y+S F++ F+   + +   + I K + + ++++Q++  Y   +S L  W+R RT  W ++    +T  +++AK +    YR   +  KVQ+K + LE++     L+T  R NNRP F+P EG   + + D++  W  LE AE  YE+ ++ +  R   ++    K   K +  E W D + A  T
Sbjct:  244 IMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASELLEWIR-RTIPWLENRTQEKTMNDMQAKQEDFRDYRRVHKPPKVQEKCQ-LEIS--FNTLQTKLRLNNRPAFMPSEG---RMVSDINGAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAMLT 424          
The following BLAST results are available for this feature:
BLAST of NO25G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21623.13.600e-17253.22alpha-actinin-4 [Nannochloropsis gaditana][more]
GBG26612.11.800e-3323.32Alpha-actinin-1 [Aurantiochytrium sp. FCC1311][more]
XP_004360011.13.800e-1222.12alpha actinin [Cavenderia fasciculata] >EGG22160.1... [more]
GAY00455.18.500e-1221.93alpha-actinin-1, putative [Pythium insidiosum][more]
XP_015242491.14.200e-1127.42PREDICTED: alpha-actinin-4 isoform X1 [Cyprinodon ... [more]
XP_015242496.14.200e-1127.42PREDICTED: alpha-actinin-4 isoform X5 [Cyprinodon ... [more]
XP_009037294.19.400e-1129.44hypothetical protein AURANDRAFT_71718 [Aureococcus... [more]
XP_015242492.19.400e-1127.42PREDICTED: alpha-actinin-4 isoform X2 [Cyprinodon ... [more]
XP_015242497.19.400e-1127.42PREDICTED: alpha-actinin-4 isoform X6 [Cyprinodon ... [more]
XP_020510718.19.400e-1128.19alpha-actinin-4 isoform X3 [Labrus bergylta][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004304NSK004304Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01260.2NO25G01260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01260.1NO25G01260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673573gene_8613Nannochloropsis oceanica (N. oceanica CCMP1779)gene
abpAgene8786Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01260.2NO25G01260.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01260.1NO25G01260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01260 ID=NO25G01260|Name=NO25G01260|organism=Nannochloropsis oceanica|type=gene|length=4415bp
CCACCTCGTCCACCCCTTCCTCCTGCTCCTCGTCCACCTCCTCCTCCTCC
TCCTCCTCGTGCCCCTCTTTCCCCTCGTCCTTCCCCTCGTCTTCCCCCTC
CTTCCCCTCCCCCACTTCCTCCTCGTCGGAGCGCCCTCACTATCTTTCTC
TTTCCCTTGTCCCTTCCTCTTGCAAGTGCCGCACGAATTCTAGCAATGGT
TGCTAGTGCTCTTGTTGCCTTTTCTCCGGGTAAAGAGAGCAAATGATCAT
AGGACCTTTTTAAGGACAAAAGTTATCTGGTCAAGCTCACAGCATGATAC
GTCCTTTCTTAGATGGATAAGGATTCAATGTGTACCCTCCGGGCCGACCT
GTTTTTTCCCCATCACCCAACCTCGAAAGCAGGGGCAGGACTCTAAAGGC
TCCTTGACTGGAGCCGTTACACCACCTTTCGAAATGCACTACTACAACGG
GAGTCCAGCTTACGACCCTGTCTCACTCAGCTGTCAAGCCACCCACCGCA
CAGAGCACGCAGACCAACGTGCCAGCTTTCTGTTTCCTCGCAGGCAACCC
GTGCTCTCCCACAGGCAGTTAACTTTGTTCTCGTCGTGCGGTGCTCCTCC
CATCATCATTATCACACATCATCCGTGTGTGCCGTGTGTACATAGTACAG
TCATTTAATCAAACACCACTACTGCAGgtgtgtctatctacactaatcca
tctgtatacacatgcgacaaccccagtctttcttcatagccccttctacg
gcttcagacagcccccgtaatgcacgcacggcgcctcccttctctcacct
gcgtccctcctccttttcctcacatttaacacacagAGGCAATAATCATG
TCTTCCTCGTCATCCTCATCTTCCTCGCTATCTCCAACTTCCTCTACGTC
CTCGTCCCTCTCCTCCACCACTTCTGCCTCTGTTGCCACTTCCCAGTCCT
CCTTCACCGGGTCCACTCCCTGGGGAGAACGGCAACGCCACGCGCAAGTC
GATGCCAAGACCAGAAGCGATTGGGTGGCTGTTCAAAAAAAGACGTTCAC
CCGATGGGCCAACGCCCACTTGCGCCGTCGAGGACAGACAGAAATCGGGG
ACCTGTTCACGGACACGAGTGATGGCATTCGCTTATTGCAACTCTTGGAA
GTCATTGGCGGCGACTCCATCTACTCCCTCTGCAATCGCAAATACAACCC
GGCCCCGAAAATGCGCATTCACAAGCTCGAAAATTGCAATCTGATCTTTG
AATATCTCCGGAAGAAAGAGCTGCAGGTCACCAATATAGGGAGCACGGAC
ATCGTCGACACGAACGAAAAGCTCATTCTGGGTCTTATGTGGACTATCAT
ATTGCGCTTCGCCGTCGCCGAAGACGGGAAGCAGGGCTTGCTCCTCTGGC
TACAGCGGTCGACGGAGGGGTATCCTGGTGTGCATGTGCATAACTTTGAT
TTGTCTTGGATGGATGGTCGGGCGTTTTTGGCCCTGATTCATAAATACCG
ACCGGATGTCTTACCAGTGCAAGTGGCGGACTGGTTGCTGGGGAAGGAGG
GGGGGGGGAGGCGAGGGAGGGAAGGGAGGAGGGGCCGAAGGCAGACGTGA
CATTGGCCTTTCAGGTGGCGAGGGACCGGCTGGGAATTGCCGCGCTTCTA
GACCCCGAGGATGTGGTGGACACGGCCAAGCCGGACGAGAAGAGTATGAT
TGCTTACCTCTCGCAGTTTTTCAAgtacgttttccgtctccttccctccc
ctccttccctccttccctccttccctccttcctccttctctaggcccctt
tcgcatctctctctctctctctctctctctctctctctctctctctttct
ctctctaagtcgctctcttatttaaatatcattaccacctccctcattcc
tttcctcattccctcgtacttttcctccctccctccttgtttccccccac
tccccagTAAATTCGCCTCTCTAACCCGGAAGCAGGCCTTAGTCGACAGC
ATCGTCAAGGCCATTACGCTCGCGCGAAAGCACGATCAGCTCCTGTCTCT
CTACAACAGCAGCAGCAGCTCCCTGAAAGGATGGCTCCGCACCCGTACCC
ACCAATGGCAACAGCACGAGGAGACCGGACGAACGACTGCCGAAGTAAAG
GCCAAGCTCGACGCATTGCATACGTATAGGCAAGAGGAAAAAGTGCAACA
GAAGGCCCGCTTGCTGGAGGTGACCAAATTGTTAGGCCAACTGCGGACGA
GCCAGAGGAGCAACAACCGCCCTATATTTATTCCGGAGGAAGGGATGAGC
GACCAGGCCCTGTGGGACGTCGATTGGCCGGCATTAGAAGCAGCGGAAGG
GGCGTATGAGAAGGCGTTGATCGATAAGTACGCACGGTTCAGCGTGATTG
ATTTTGCGTTGACCAAAGTGCAAAATAAATTGAGgtacgtttccatcttt
ccgcccatccttccctccctccgcattcctctcctccgggtaaactcgtg
agggagaagcagaaattggagggagggagggagggagggaaagaaagcca
gggagcataacacaacgccatcaacaacactgcaccttcatccccaactc
accgcttctatctttcttccccctctctctccctcccttcctacctccct
ccccccccacagCAAAATCGAACCCTGGCTCGACTCCCGCACCGCCCACT
TTACCTCCCACCTTCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCG
TCGAGTAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCAGTATCAGTGG
CTTGGAGCAGCGGTTGGCGAGCTACTATGCCTTCAAAGGTCAAGTCGATG
TGTACGAATCCCTCCTGAAGGAAAGCCAGCGTCTCCTCTCCGGCCACCTC
TCAGAAGAACATGCCGGGGTTGGGGAGACCCACGACAGGGTTGCCGTTGC
AGAGGGGACGATGACAACGTTGAAGGAGATTGCCGAGCGATTCAAAGTGG
AGGTAGAGGAAAGCTTGAAGCTGGAGAAGGAGCTGGAAGCAGCCGCGGAG
AGGTATGTCCTCTTGGCGGGTAAGGTCGGGTTTGTGATTGATGAAGTGGA
GGAGGCGATAGCCGAGCCAATTCTTGGGAATAGCGTGGAGGAGGTGGAAG
AGCTGGAGGAGCGATTTAAAAATGTAACGGAAAATTTTAAAAATTTGAAG
GAGGTGATGCTGGAATTGTCAAGGGTGGGTGAGTTTTTGACGAAGCACGG
CCGGGTGGAAAGGGTGGAGGAGGAGCGGCAGGCGACACCTCCAGCTGTGC
TCCTTGCGACAGTTCAAAAAGTGGAGAAACGGATCGAGGAGCATATTGCG
GAATTGGAACGGGCGAGGGAAGAAACGCGGAGGAAGGTGAGGGTAAGGGA
GGAGTTTGCAGAGGCTGCACGGGGATTAAACGCGTGGGTACAGCAGCTGT
CGGAGAGGAGTAACCTGGGGGGACGACGCTCCTCCCTCCAACCGCAAGAC
GTGACGAAGGAGCTGGAGGCCCTGAGGGACGAATATGAGATGGGAGGGAG
GGAGAGAGGGAGGATGATGGTAGTGGAGGAGGCGAGCGAGGCGCAAGAGG
CAGCGGGGGTGGTCGCGAACGGTTTCGTAACGGATACGGTCTACTCTCTC
CGGAAAGAATACGAAGAGTTGGGAAAGTTGATTGAAGCCCGATTAAACGA
CAGTGTAACGGCCCAAGCGATGTTGATGAGCCAAACCGCCGAAAGTGACG
AGCAGATGAAGGAAGTGTTGAGGGTATTCCAAGTGCTGACGACAGCAGCC
ACCGTTGTAGGGGAAGGGGAAAGGGAGGAGGGAGGGAGGGAGGGAGGGAG
GGCAGGTGCCAGAGGAGAAGGGGGGTGCTTGACACAGAAAGCGTTTAAGG
AGGGGTTGCAAGCGTTGGGGGTGGTGTTGGAGGACTCGGAAGCCGACGTC
CAATATAAGAAAGTTGTGGGTGGAAGGAGAGGGAGGGAGGGAGGGAGGGA
AATGGGCGGGGGTGGAGGAGGGATGACACTGGCGGAGTTTAGCTCGTTTG
TGACGACTGCTCTGACAGCGGGATCATCGCGTGAGGATATTTTGGGAGCG
TTTAAGACGATTGCTACAAGCATGGGGCAAGGGAGAGAGGGAGGAAAGGA
AGGAGGGCAGGGAGGAGGAGGTGGAGGGGGACGGGGAGGGGTGATATCCG
GGGAGGTTCTGAACCTGGTGTTTGAGGCGCAGGGAGACTGTGTGGCTTAT
ATGAAGGAGCACATGCCGGAAACAGGGGTAGAGAAGTTAAAGAAGAGGAA
ACAAGGGAAGGAGAGGGGAGGGGAAGAGGCCGACGGGGAGGAAGGGGAGG
AGGAAGAGGTGGAGGTGCCAGTATATGACTACATGTCGTTTGTGTCGTAT
ATTTTTGAGAGGTAA
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protein sequence of NO25G01260.2

>NO25G01260.2-protein ID=NO25G01260.2-protein|Name=NO25G01260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=753bp
MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLK
GWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTK
LLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDK
YARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSHLPSSSSSSSSSSSSS
SSSSSSCSSSSSISGLEQRLASYYAFKGQVDVYESLLKESQRLLSGHLSE
EHAGVGETHDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERY
VLLAGKVGFVIDEVEEAIAEPILGNSVEEVEELEERFKNVTENFKNLKEV
MLELSRVGEFLTKHGRVERVEEERQATPPAVLLATVQKVEKRIEEHIAEL
ERAREETRRKVRVREEFAEAARGLNAWVQQLSERSNLGGRRSSLQPQDVT
KELEALRDEYEMGGRERGRMMVVEEASEAQEAAGVVANGFVTDTVYSLRK
EYEELGKLIEARLNDSVTAQAMLMSQTAESDEQMKEVLRVFQVLTTAATV
VGEGEREEGGREGGRAGARGEGGCLTQKAFKEGLQALGVVLEDSEADVQY
KKVVGGRRGREGGREMGGGGGGMTLAEFSSFVTTALTAGSSREDILGAFK
TIATSMGQGREGGKEGGQGGGGGGGRGGVISGEVLNLVFEAQGDCVAYMK
EHMPETGVEKLKKRKQGKERGGEEADGEEGEEEEVEVPVYDYMSFVSYIF
ER*
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protein sequence of NO25G01260.1

>NO25G01260.1-protein ID=NO25G01260.1-protein|Name=NO25G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=753bp
MIAYLSQFFNKFASLTRKQALVDSIVKAITLARKHDQLLSLYNSSSSSLK
GWLRTRTHQWQQHEETGRTTAEVKAKLDALHTYRQEEKVQQKARLLEVTK
LLGQLRTSQRSNNRPIFIPEEGMSDQALWDVDWPALEAAEGAYEKALIDK
YARFSVIDFALTKVQNKLSKIEPWLDSRTAHFTSHLPSSSSSSSSSSSSS
SSSSSSCSSSSSISGLEQRLASYYAFKGQVDVYESLLKESQRLLSGHLSE
EHAGVGETHDRVAVAEGTMTTLKEIAERFKVEVEESLKLEKELEAAAERY
VLLAGKVGFVIDEVEEAIAEPILGNSVEEVEELEERFKNVTENFKNLKEV
MLELSRVGEFLTKHGRVERVEEERQATPPAVLLATVQKVEKRIEEHIAEL
ERAREETRRKVRVREEFAEAARGLNAWVQQLSERSNLGGRRSSLQPQDVT
KELEALRDEYEMGGRERGRMMVVEEASEAQEAAGVVANGFVTDTVYSLRK
EYEELGKLIEARLNDSVTAQAMLMSQTAESDEQMKEVLRVFQVLTTAATV
VGEGEREEGGREGGRAGARGEGGCLTQKAFKEGLQALGVVLEDSEADVQY
KKVVGGRRGREGGREMGGGGGGMTLAEFSSFVTTALTAGSSREDILGAFK
TIATSMGQGREGGKEGGQGGGGGGGRGGVISGEVLNLVFEAQGDCVAYMK
EHMPETGVEKLKKRKQGKERGGEEADGEEGEEEEVEVPVYDYMSFVSYIF
ER*
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Synonyms
Publications