abpA, gene8786 (gene) Nannochloropsis gaditana

Overview
NameabpA
Unique Namegene8786
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:234350..238538 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100012g11
Gene biotypeprotein_coding
GeneabpA
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:234350..238538 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01260NO25G01260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9059rna9059-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9059rna9059Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9059

>rna9059-protein ID=rna9059-protein|Name=rna9059|organism=Nannochloropsis gaditana|type=polypeptide|length=987bp
MSAASPSSSRSSTASPSSSIASSVTSSISSSSSPATTSATTPWGERQRHT
QVDEKTKGDWVAVQKKTFTRWANAHLRRRGQVEINDLFADTSDGIRLMQL
LEVIGGDSIYSLCKRKYNPAPKFRIHKLENCNLIFEYLRKKELQLTNIGS
TDIVDSNEKLILGLMWTIILRFAVAENGKQGLLLWLQRSTAGYPGVHVHN
FDLSWTDGRAFLALIHKYRPDVLPADAVSRLKKEGGKEDAKQQVALAFQL
ARDELEIDALLDPEDVVDTAKPDEKSMIAYLSQFFNKFASLTRKQALVES
IVKAVGVARKHDTLLSDYERESQELKTWLQARTRRWEALGGMGRTTEDVK
AQLDALHVYRREEKVQQKAKLLRLTSVLGQLRGSQRNHNRPLYAPPPGMG
DKDLWEEDWPALEAAEGRYEKACIEKYAGFSVIDFALTKVQNKLSKLEPW
LESRTSYFTTALPRPPVKGSDGGEDENGECKSALVVSIPSLEQRLSSHAA
FESQVDVYEALLSESRRLLSGELSEEHAGVGLTKGRVAVAAETMANLKDK
AKDFKVGVEARLQLEKKLEHAANRYVTLAEKVGFVVDEVEEAMAEPLLGN
NVEEVEALESRFSTVSATFQNLSPVMKELAELSALLIEHGRADRVGEERQ
TTAPAVLLATHVRVVEDVSKHTTALAQAREETSRRVQAREAFATAARALN
AFVQRLTEKSNLGGRRSSLQPEEVKNELKSLQAIYDGEGKTLMASVESAS
AEQEAAGVVANGFVTDTVYSLRKAYEDLGKLLEAQITDCLTAEAALLSQT
AESNEQWKEITRVFHALEEEKRGVLTAKAFKEGLQALGVLLEDSEADVQF
RKVGGKEKVNGMTLAEFGSVVTAALTAGSSSDDIMAAFKAISLSETEKEE
GKEGLISGEVIKASFAGHGDIAEYIEAHMPQKGTKVVKRRRTRTRGAEGE
EGKTGESQKEGEEKGEKEEVEVPMFEYASFVHHIFAR
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Synonyms
Publications