NO25G01140, NO25G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO25G01140 vs. NCBI_GenBank
Match: EWM21588.1 (hypothetical protein Naga_100012g24 [Nannochloropsis gaditana]) HSP 1 Score: 342.4 bits (877), Expect = 1.600e-90 Identity = 207/338 (61.24%), Postives = 243/338 (71.89%), Query Frame = 0 Query: 1 MLIRLPLPLVLHLLVLPFVIVRAYQPPPGPGHHSTXXXXXXXXXXXXXXXXSSSSRQDLISTATTALAGCSSLLFLGSSRTSPAHATDAREAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGSSEFCRVADAAADMGVASVPRLSALRVLRRWKRRGGGEEGGIEGLELVKYYPTVSLSADPPAVMTIKARLTLERIR 339 MLIR LPL HLL+ P ++ A+ P P XXXXXXXXX +SSR+D +S+ + S L FL + P+HA+ AREA++K SK+PGYGAPD LYPSFFAG+W +TREVVGL++PPEE GKV +DLAQA AQQGEKL + +RFLPY A V + +VIADRGFNEE LW+ARLA AGKSELYQEGVSSRW+R NPNVLTVSFPDG VRE+KVTKRSFE+ DAFGSSE+CRVADAAAD G+ASVPRLSALRVLRR+KR G IEGLELVKYYPTVS SADPP++MT+KAR+ +ER R Sbjct: 1 MLIRPLLPL-FHLLLPP--VLLAFHPQPXXXXXXXXXXXXXXXXL-------TSSRRDFLSSVSII---PSFLCFLFEA-PRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRS--------PRSEASV-EGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVG----EDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR 311
BLAST of NO25G01140 vs. NCBI_GenBank
Match: CEM21975.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 89/257 (34.63%), Postives = 128/257 (49.81%), Query Frame = 0 Query: 83 PAHATDAREAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQD-LAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADV-GNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGSSEFCRVADAAADMGVASVPRLSALRVLRRWKRRGGGEEGGIEGLELVKYYPTVSLSADPPAVMTIKARLTLERI 338 P+ A E I K S +PG G PD+ YP+ + G+W+ RE V + PE KVD L+ A +VF +R++ G RA V GN + A R I G + G +RW +NPN+LT+ P G +RE+KVTKR+FE P +D FG SE+ R+AD + + V VP L A R+ R++R IEGLEL + +P S++ DP V+ IK ++ ++RI Sbjct: 33 PSQAEGISEGIRKAASGLPGLGPPDVYYPASWLGKWE-RRESVVSVTAPEGPSKVDPPHLLSDAEKLLNRTIVFPVRYIERGSG----------VVMDRAFVWGNTESARRYCIESGGGGVLPIGEV------------SGYPTRWSESNPNILTIDMPGGTIREMKVTKRAFEQPSDDTFGFSEYMRIADTSRALTV-EVPTLFAARLQGRYRRVSSLR---IEGLELWQVFPPTSIAPDPQPVLVIKRQVAMQRI 262
BLAST of NO25G01140 vs. NCBI_GenBank
Match: KOO26972.1 (hypothetical protein Ctob_004877 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 131.7 bits (330), Expect = 4.200e-27 Identity = 98/291 (33.68%), Postives = 143/291 (49.14%), Query Frame = 0 Query: 55 SRQDLISTATTA----LAGCSSLLFLGSSRTSPAHATDAREAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIP-PEEAGKVDSQDLAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGSSEFCRVADAAADMGVASVPRLSALRVLRRWKRRGGGEEGGIEGLELVKYY-PTVSLSAD---PPAVMTIKARLTLER 337 +R+ L+++AT L S+ L + + + ++ E I K S +PGYG PDI YP F G W++ +V + P E+ +D A+ L F RF+ G G + + N MVIADR FN E+ A+ A + ++RWE TNPNVLT++ G V E KVTKRSF+ P + AFG+SE+ R+ADA ++ + VP + A RV ++K G IE +EL + + PT + AD V+T KARL R Sbjct: 5 TREQLLTSATALCIRFLVPASTGLIVPDAAHAAVKFSNGAEEIRKAASLIPGYGPPDISYPPVFLGRWRVESRMVNVTTPLGEDVAPMDQLKTARQLMAAERPLSFEQRFVEAEGGASGVVLARENSDSLALSLKN--YGGGMVIADRAFNAEHRAAAQPGAAPLQDF-----TARWEPTNPNVLTLA-SRGTVVETKVTKRSFQQPFDGAFGTSEYVRIADAGSEGVLGGVPNIKASRVQIKYK-WDGANPSVIEAIELAQVFDPTQTGFADLAGATPVLTTKARLLFTR 286
BLAST of NO25G01140 vs. NCBI_GenBank
Match: EJK67758.1 (hypothetical protein THAOC_11171 [Thalassiosira oceanica]) HSP 1 Score: 109.4 bits (272), Expect = 2.200e-20 Identity = 90/266 (33.83%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 54 SSRQDLISTATTALAGCSSLLFLGSSRTSPAHATDAREAISKVISK-VPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMV--IADRGFNEENLWRARLALAGKSELYQEGV-----SSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGE-DAFGSSEFCRVADA-AADMGVASVPRLSALRVLRRWKRRGGGEEGGIEGLEL 310 +SR D S + +LL T A EAI + SK +PG G PD+ YP +FAG WK+TR + + + DL + + RF+PYN G+ D + D + + IADR FNE+ L A K +E V S W TNPNVL++S+ DG +EVKVTKRS + G+ + SSEF R+ D AA GV +P + RVL +WK G + IEG+E+ Sbjct: 371 ASRDDESSPLRRLMLAAPALLL---PATKARAAETPSEAIRLLSSKTLPGLGPPDVYYPPYFAGRWKVTRVI-------SSSDDLPWTDLKDNGVELPISISCEARFVPYNAGK---------------DFTDFDNQSNDIPAIADRSFNEKALNSALAEEISKLFSTKEPVIPTVRSIDWTATNPNVLSISYADGASKEVKVTKRSSDVSGDGNGVFSSEFRRITDVPAASNGVGGIPSILKSRVLTKWK-PGNSSKTAIEGIEI 610
BLAST of NO25G01140 vs. NCBI_GenBank
Match: XP_005766277.1 (hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516] >EOD13848.1 hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 106.7 bits (265), Expect = 1.500e-19 Identity = 87/255 (34.12%), Postives = 124/255 (48.63%), Query Frame = 0 Query: 91 EAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQAR-AQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGSSEFCRVADAAADMGVASVPRLSALRVLRRWKRRGGGEEGG---IEGLELVKYY-PT----VSLSADPPAVMTIKARLTLER 337 E + K S +PGYG PDI +P F G W++TR+VV + P E + L QAR + + F RF+ +E R VIADR FN E R A++G + + +RWE +NPNVLT++ R + ++P + AFG+SE+ R+ADA + ++SVP + A RV ++K GE G IEGLE+ + PT LS P ++T KARL ER Sbjct: 30 EEVRKAASLLPGYGPPDIAFPPPFRGRWRVTRQVVDVQTPLGETA-APREALRQARDSLVAPPVTFEQRFVQDSE--------------------------RAVIADRSFNAE---RRTAAISGTA---LADLEARWEPSNPNVLTLA------RVSTSSLVETKAPFDGAFGTSEYARIADAGSSGVLSSVPTILAARVQAKYKWEPAGEPGAVARIEGLEITSTFDPTQTGFADLSGATPVLVT-KARLRFER 244
BLAST of NO25G01140 vs. NCBI_GenBank
Match: XP_005835279.1 (hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712] >EKX48299.1 hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712]) HSP 1 Score: 101.7 bits (252), Expect = 4.700e-18 Identity = 76/234 (32.48%), Postives = 110/234 (47.01%), Query Frame = 0 Query: 73 LLFLGSSRTSPAHATD------AREAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQARAQQGEKL-VFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGS-SEFCRVA---DAAADMGVASVPRLSALRVLRRWKR 296 LL G + PA A D E + K SK+PG+G D+ YP F G+W + R + G+ E ++ QDL + + +K+ +T R++P +G IADR +N L LA + E +G+ +W +NPNVLTVS+PDG + E KVTKRS G+ + +EF R+A +A + GVA PR+SA RW R Sbjct: 35 LLVCGIPTSQPAFAQDLVRDDKVGENVRKAASKIPGFGPKDVFYPDSFRGKWNVERTITGV----ELLAAIEDQDLYKKVLSRKDKVEQYTTRYIPKEDG---------------------------TIADREYNTRQL------LAAEDE---KGMDVQWSASNPNVLTVSYPDGRIEERKVTKRSSSMGGDGSTAEFTEFVRIAQLQNAGSLTGVAPAPRISA-----RWYR 223
BLAST of NO25G01140 vs. NCBI_GenBank
Match: XP_002289942.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93479.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 100.5 bits (249), Expect = 1.000e-17 Identity = 80/245 (32.65%), Postives = 119/245 (48.57%), Query Frame = 0 Query: 76 LGSSRTSPAHATDAREAISKVISK-VPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRARLALAGKSELYQEGVSSR---WERTNPNVLTVSFPDGVVREVKVTKRSFE-SPGEDAFGSSEFCRVADAAADMGVA-SVPRLSALRVLRRWKRRGG-----GEEGGIEGLEL 310 +G++ + + A EAI + SK +PG G PD+ YP +F G+WK+TR V S+D K+ +RF+PY+ G++ D N A IADR FNE + + A ++ + + S W TNPNVL++S+ DG +EVKVTKRS + S D+ SSEF R+ A GVA +P + RVL +WK+ G+ +EG+E+ Sbjct: 1 MGTTPFTASAAETPAEAIRILSSKTLPGLGPPDVYYPPYFVGKWKVTRLV------------TTSEDSFYKDVPLPLKVESEMRFVPYDAGKD--------FENFSGDNANDSPA----IADRAFNERSFYNALASVLFSGPVPKSLPSINKLDWTPTNPNVLSMSYADGSSKEVKVTKRSSDVSKSGDSVFSSEFRRITAVPAAGGVAGGIPSIYKSRVLTKWKQGADGTGFIGKVNLVEGIEI 221
BLAST of NO25G01140 vs. NCBI_GenBank
Match: OEU21998.1 (hypothetical protein FRACYDRAFT_232149 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17 Identity = 86/300 (28.67%), Postives = 129/300 (43.00%), Query Frame = 0 Query: 56 RQDLISTATTALAGCSSLLFLGSSRTSPAHATDAREAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEEAGKVDSQDLAQARAQQGEKLVFTIRFLPYNEGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLWRA--RLALAGKSELYQEG------------VSSRWERTNPNVLTVSFPDGVVREVKVTKRSFESPGEDAFGSSEFCRVADAAADMGVASVPRLSALRVLRRWKRRGGGEEGGIEGLELVKYYP-----TVSLSADPPAVMTIKARLTLER 337 R+ +T T+L L F+ S + A DA EA+ + + +PGYG D+ YP FAG WKMTREV E +L++ IRF+ E + V+ADRG+N+ L A R G+ E +E +S W ++NPN L + DG +E+KVTKR+ E D SSEF R+ +P +SA R++ +WK+ +E +EG+E+V + SL+ + + K+RL L R Sbjct: 4 RKTFATTVGTSLVAAEVLSFMNPSVSVAAAPLDAGEAVRRSAANIPGYGKQDVFYPELFAGNWKMTREV--------EFNXXXXXXXXXXXXXL--RLMYPIRFIRSIEDD-------------------------AVVADRGYNQAELETALVRTVQRGRKEDGEESSSTTAPSTNSPKISYEWVQSNPNDLRLVLSDGTKKEIKVTKRATERT-VDTVSSSEFQRITQEER----GGIPLISARRIVSKWKQ---VDESTLEGIEIVYEMAGGDPLSTSLTGNITPTILSKSRLYLVR 260
BLAST of NO25G01140 vs. NCBI_GenBank
Match: OSX75113.1 (hypothetical protein BU14_0255s0021 [Porphyra umbilicalis]) HSP 1 Score: 75.1 bits (183), Expect = 4.700e-10 Identity = 66/215 (30.70%), Postives = 92/215 (42.79%), Query Frame = 0 Query: 90 REAISKVISKVPGYGAPDILYPSFFAGEWKMTREVVGLIIPPEE----AGKVDSQDLAQARAQQGEKL----VFTIRFLPYN-----EGEEGAIXXXXXXXXXRADVGNADKAARMVIADRGFNEENLW----------RARLALAGKSELYQEGVSSRWERTNPNVLTVSFPDGVVREVKVTKRSF--ESPGEDAFGSSEFCRVA--DAAADMG 278 R +IS S +PG G D+ YPSFF G+W+++RE + P E AG+ + AR + +L + +RF+ + + AI V D AA M I R R +G+ + VS+ W NPNVLTV+ G RE K+TKRS+ E G F SSE+ R+A D D G Sbjct: 131 RSSISSAASALPGTGPSDVYYPSFFEGDWELSREPFSVESPTVEAAAAAGRPAPPAVVAARERSARRLGVAIAYPVRFIHHRGHVVADRAYNAIGREAAERAVVVGVSVGDVAAAMAIKGAXXXXXXXXXXXXXXXPTRRVRAPGSGR-----DSVSTTWSPDNPNVLTVT-AGGSTREEKITKRSYVDEPGGYGTFVSSEYARIARLDEVVDEG 339 The following BLAST results are available for this feature:
BLAST of NO25G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01140 ID=NO25G01140|Name=NO25G01140|organism=Nannochloropsis oceanica|type=gene|length=1017bpback to top protein sequence of NO25G01140.1 >NO25G01140.1-protein ID=NO25G01140.1-protein|Name=NO25G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bpback to top Synonyms
Publications
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