NO25G01120, NO25G01120 (gene) Nannochloropsis oceanica

Overview
NameNO25G01120
Unique NameNO25G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1517
Alignment locationchr25:309468..310984 +

Link to JBrowse

Properties
Property NameValue
DescriptionHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:309468..310984 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR006439HAD-SF_hydro_IA
Homology
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_005853850.1 (hypothetical protein NGA_0345402 [Nannochloropsis gaditana CCMP526] >EKU22508.1 hypothetical protein NGA_0345402 [Nannochloropsis gaditana CCMP526] >EWM21647.1 Haloacid dehalogenase-like hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 397.1 bits (1019), Expect = 5.500e-107
Identity = 208/309 (67.31%), Postives = 251/309 (81.23%), Query Frame = 0
Query:   32 LLLVLIPAMLMTHAFLLPASVLSSSKSISASRERQQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILESESLHREAYNAMFREFQISYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGDGDGIQVTAKQLRDIALG 341
            LLL+++ A+ ++ AF+ P   LSS    + S +  Q P        +     AS+DWALIFDCDGVILESESLHREAYN +FREF+I Y W+EEYYD+LQNK+GGGIPKMRY+FGE+GWP+S+LG++ P+  + ++ MLN LQ+RKTDIYKDMIRGGTAQVRPGVLRLI+EAR L E       PKLAICSASTK+SCLFVLDNLL  +VLQ+FDLILAGDDVK+RKPDPEIY +ASERL IPASRSVVIEDSLIGLQAALGA+MPC+IT T ST+ QDF+ A AVF+ELGDG+ +QVTA++L +IALG
Sbjct:    9 LLLIVVSAVALSQAFVSP---LSSVYKPATSTQPGQLPHRTVT---WLSAGRASRDWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAA-PTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGE-----DRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEIALG 305          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: CBN78540.1 (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus])

HSP 1 Score: 337.0 bits (863), Expect = 6.800e-89
Identity = 175/304 (57.57%), Postives = 218/304 (71.71%), Query Frame = 0
Query:   31 LLLLVLIPAMLMTHAFLLPASVLSSSKSISASRERQQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILESESLHREAYNAMFREFQISYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGDGDGIQVTAKQL 335
            L+    + A + +  F+ P    SSS+  SA R    + R  A  R    G ++  +WA+IFDCDGVILESESLHREAYNA+FREF + Y W+ EYYDELQNK+GGG PKMRYYFGE+GWP S LG +PP + ++K+ ++++LQDRKTDIYK+ +  GTA +RPGV RLI E +A+  G       K+AICSASTK +CLFVLDNLLGEE L  FDL+LAGDDV  RKPDP IY++ASE+LG+P  R +VIEDSLIGL+AALGAKM C+IT T ST  QDF  +  V+ ELGD    QV A +L
Sbjct:    4 LVFTFAVVAPVFSQGFVAPILSTSSSRDGSAPR----RARTSAVSRPLQSGSSSPPEWAVIFDCDGVILESESLHREAYNAVFREFAVDYEWSPEYYDELQNKVGGGKPKMRYYFGENGWPKSKLG-APPETDQEKDLLIDSLQDRKTDIYKEFVANGTAVLRPGVQRLIDETKAISGG-------KMAICSASTKDACLFVLDNLLGEENLSKFDLVLAGDDVPRRKPDPMIYALASEKLGVPPERCMVIEDSLIGLEAALGAKMNCVITYTGSTESQDFAGSLGVYPELGDEGSTQVRASEL 295          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: CEM22042.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 313.9 bits (803), Expect = 6.100e-82
Identity = 181/315 (57.46%), Postives = 216/315 (68.57%), Query Frame = 0
Query:   26 PFGNALLLLVLIPAMLMTHAFLLPASVLSSSKSIS-ASRERQQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILESESLHREAYNAMFREFQISYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGDGDGIQVTAKQLRDIAL 340
            PF  +LL +V   + L  H+FLL +    S + +   S   +Q+P   + M    G   AS +WALIFDCDGVI+ESE LHR+AYNAMFREF I Y W  EYYD LQN IGGGIPKMR+YF E+GWPSS+LG  PP+ ++ +E ML TLQDRKT IYK  I  GTAQ RPGVLR+++EA       R  G  KLAICSASTK+SCLFVL+NLLG+++L  FDLILAGDDV +RKP PEIY  ASERL IP SR +VIEDSLIGLQAAL A M C+IT T ST  Q F  A  V+ ++       VTA  LR + L
Sbjct:   41 PFITSLLAIVFF-SPLPAHSFLLSSRPTHSQRKLRLPSASLRQRPLSASVMS--GGASQASDEWALIFDCDGVIIESEGLHRDAYNAMFREFAIPYEWTPEYYDVLQNMIGGGIPKMRHYFTENGWPSSTLG-PPPADTDGREGMLKTLQDRKTIIYKSFISEGTAQPRPGVLRVMEEAM------RTPGT-KLAICSASTKSSCLFVLENLLGKDLLSRFDLILAGDDVTHRKPHPEIYHAASERLAIPPSRCLVIEDSLIGLQAALQADMKCVITHTHSTGDQVFDGAEGVYADMS-----LVTAADLRGMVL 339          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_004973750.1 (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 isoform X1 [Setaria italica] >KQL02275.1 hypothetical protein SETIT_014111mg [Setaria italica])

HSP 1 Score: 264.2 bits (674), Expect = 5.600e-67
Identity = 138/266 (51.88%), Postives = 182/266 (68.42%), Query Frame = 0
Query:   66 QQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILESESLHREAYNAMFREFQI--------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD 324
            ++ PR   +       PA+S D ALIFDCDGVILESE LHR+AYN  F  F +          +W+E +YDELQN+IGGG PKMR+YFGE+GWPSS++  +PPS+  DKEK+++ +QD KT+ YK++I+ GT + RPGVLRL+ E +        G   KLA+CSA+TK+S +  L+NL+G E  +  D  LAGDDVK +KPDP IY  A+E+LG+ +   +V+EDS+IGL AA GA M CIIT TPST  QDFT A A + +L D
Sbjct:   45 RRAPRLVVSASASPASPASSLD-ALIFDCDGVILESEHLHRQAYNDAFAHFGVRCPPASADPLYWDEAFYDELQNRIGGGKPKMRWYFGENGWPSSNIFETPPSTDSDKEKLVDIIQDWKTERYKEIIKSGTVEPRPGVLRLMDEVK--------GAGIKLAVCSAATKSSVIMCLENLIGLERFKGLDCFLAGDDVKLKKPDPTIYVTAAEKLGVQSKNCLVVEDSVIGLLAAKGAGMSCIITYTPSTASQDFTDAIATYPDLSD 301          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_020083071.1 (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 isoform X1 [Ananas comosus] >OAY78126.1 Haloacid dehalogenase-like hydrolase domain-containing protein [Ananas comosus])

HSP 1 Score: 264.2 bits (674), Expect = 5.600e-67
Identity = 133/241 (55.19%), Postives = 171/241 (70.95%), Query Frame = 0
Query:   89 ALIFDCDGVILESESLHREAYNAMFREFQI--------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTEL 322
            ALIFDCDGVILESE LHR+AYN  F  F++          HW  E+YDELQN+IGGG PKMR+YFGE+GWPSSS+  +PPSS  D+EK+++ LQD KT+ YK++I+ GT + RPGVLRL+ E +        G   KLA+CSA+TK+S +  L+NL+G E  ++ D  LAGDDVK +KPDP IY  A+E+LG+ +   +V+EDS+IGLQAA GA M CIIT T ST  QDF  A A + +L
Sbjct:   81 ALIFDCDGVILESEHLHRQAYNDAFAHFRVRCPPASPEPLHWASEFYDELQNRIGGGKPKMRWYFGEYGWPSSSIFETPPSSDSDREKLVDVLQDWKTERYKEIIKSGTVEPRPGVLRLMDEVK--------GAGIKLAVCSAATKSSVILCLENLIGIERFRSLDCFLAGDDVKEKKPDPSIYITAAEKLGVQSENCLVVEDSVIGLQAAKGAGMSCIITYTSSTANQDFKDAIATYPDL 313          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_018842902.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 isoform X1 [Juglans regia])

HSP 1 Score: 261.9 bits (668), Expect = 2.800e-66
Identity = 131/250 (52.40%), Postives = 174/250 (69.60%), Query Frame = 0
Query:   83 AASQDWALIFDCDGVILESESLHREAYNAMFREFQI---------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD 324
            +++Q  AL+FDCDGVILESE LHR+AYN  F  F +           +W  ++YDELQN+IGGG PKMR+YFGEHGWPSS++   PP +  D+ K+++TLQD KT+ YK++I+ GT + RPGVLRL+ EA+A           KLA+CSA+TK+S +  L+NL+G E  Q+ D  LAGDDVK +KPDP IY  AS+RLG+     +V+EDS+IGLQAA GA M C+IT T ST  QDF  A A++ +L +
Sbjct:   57 SSNQFQALVFDCDGVILESEHLHRQAYNDAFAHFNVRCPSSQLQHPLNWGSDFYDELQNRIGGGKPKMRWYFGEHGWPSSTIFEKPPEADVDRVKLIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKA--------AGKKLAVCSAATKSSVILCLENLIGIERFQSLDCFLAGDDVKEKKPDPSIYLTASKRLGVSPQDCLVVEDSIIGLQAATGAGMSCVITYTSSTANQDFKDAIAIYPDLSN 298          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: PON47640.1 (HAD hydrolase, subfamily IA [Parasponia andersonii])

HSP 1 Score: 261.5 bits (667), Expect = 3.600e-66
Identity = 131/242 (54.13%), Postives = 169/242 (69.83%), Query Frame = 0
Query:   89 ALIFDCDGVILESESLHREAYNAMFREFQI-------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD 324
            ALIFDCDGVILESE LHR+AYN  F  F +         +W  E+YDELQN+IGGG PKMR+YF EHGWPSS++  +PP   E++ K+++TLQD KT+ YK++I+ GT + RPGVLRL+ EA+A            LA+CSA+TK+S +  L+NL+G E  Q  D  LAGDDVK +KPDP IY  A+ERLG+     +V+EDS+IGLQAA GA M C++T TPST  QDF  A AV+ +L +
Sbjct:   73 ALIFDCDGVILESEHLHRQAYNDAFAHFNVRCSNSPEPLNWGSEFYDELQNRIGGGKPKMRWYFKEHGWPSSTIFETPPEDDENRAKLIDTLQDWKTERYKEIIKSGTVETRPGVLRLMDEAKA--------AGTLLAVCSAATKSSVVLCLENLIGLERFQGLDCFLAGDDVKLKKPDPSIYLTAAERLGLSGKECIVVEDSVIGLQAATGAGMSCVVTYTPSTADQDFKDAIAVYPDLSN 306          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_011022811.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 isoform X1 [Populus euphratica])

HSP 1 Score: 260.8 bits (665), Expect = 6.200e-66
Identity = 139/285 (48.77%), Postives = 184/285 (64.56%), Query Frame = 0
Query:   63 RERQQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILESESLHREAYNAMFREFQI------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD---GDGIQVTAKQLRDIA 339
            R+RQ        + + +    ++   ALIFDCDGVILESE LHR+AYN  F  F +        +W+ E+YD LQN+IGGG PKMR+YF EHGWPSS+L   PP   E + K+++TLQD KT+ YK++I+ GT + RPGVLRL+ EA+A           KLA+CSA+TK+S +  L+NL+G E  Q  D  LAGDDVK +KPDP IY  AS+RLG+     +V+EDS+IGLQAA  A M C+IT TPST  QDF  A A++ +L +   G    V  ++LR +A
Sbjct:   34 RQRQHYSPPPRHLNVVSSSAGSASLEALIFDCDGVILESEHLHRQAYNDAFAHFNVICSSSLPLNWSPEFYDVLQNRIGGGKPKMRWYFKEHGWPSSNLFEKPPEDDESRAKLIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKA--------AGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLAGDDVKEKKPDPSIYVTASKRLGVSERDCLVVEDSVIGLQAATTAGMSCVITHTPSTADQDFKDAIAIYPDLSNVSIGFSSTVQIRRLRVVA 310          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: PON90921.1 (HAD hydrolase, subfamily IA [Trema orientalis])

HSP 1 Score: 260.4 bits (664), Expect = 8.100e-66
Identity = 131/242 (54.13%), Postives = 169/242 (69.83%), Query Frame = 0
Query:   89 ALIFDCDGVILESESLHREAYNAMFREFQI-------SYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD 324
            ALIFDCDGVILESE LHR+AYN  F  F +         +W  E+YDELQN+IGGG PKMR+YF EHGWPSS++  +PP   E++ K+++TLQD KT+ YK++I+ GT + RPGVLRL+ EA+A            LA+CSA+TK+S +  L+NL+G E  Q  D  LAGDDVK +KPDP IY  A+ERLG+     +V+EDS+IGLQAA GA M C++T TPST  QDF  A AV+ +L +
Sbjct:   69 ALIFDCDGVILESEHLHRQAYNDAFAHFNVRCSNSPEPLNWGSEFYDELQNRIGGGKPKMRWYFKEHGWPSSTIFKTPPEDDENRAKLIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKA--------AGTLLAVCSAATKSSVVLCLENLIGLERFQGLDCFLAGDDVKLKKPDPSIYLTAAERLGLSGKECIVVEDSVIGLQAATGAGMSCVVTYTPSTGDQDFKDAIAVYPDLSN 302          
BLAST of NO25G01120 vs. NCBI_GenBank
Match: XP_018860336.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 isoform X1 [Juglans regia])

HSP 1 Score: 259.2 bits (661), Expect = 1.800e-65
Identity = 133/245 (54.29%), Postives = 174/245 (71.02%), Query Frame = 0
Query:   89 ALIFDCDGVILESESLHREAYNAMFREF----------QISYHWNEEYYDELQNKIGGGIPKMRYYFGEHGWPSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLIKEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILAGDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCIITSTPSTRGQDFTAAHAVFTELGD 324
            AL+FDCDGVILESE LHR+AYN  F  F          Q+  +W+ ++YD+LQN+IGGG PKMR+YFGE+GWPSS++   PP + ED+ K+++TLQD KT+ YK++I+ GT + RPGVLRL+ EARA    GR     KLA+CSA+TK+S +  L++L+G E  Q+ D  LAGDDVK +KPDP IY  AS+RLGI     +V+EDS+IGLQAA  A M C+IT T ST  QDF  A A++ +L D
Sbjct:   68 ALVFDCDGVILESEHLHRQAYNDAFAHFNVRCPSSSQSQLPLYWDSDFYDDLQNRIGGGKPKMRWYFGENGWPSSTILEKPPEADEDRAKLVDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEARA---AGR-----KLAVCSAATKSSVILCLESLIGIERFQSLDCFLAGDDVKEKKPDPSIYLTASKRLGISPQDCLVVEDSIIGLQAATRAGMSCVITYTSSTADQDFKDAIAIYPDLSD 304          
The following BLAST results are available for this feature:
BLAST of NO25G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853850.15.500e-10767.31hypothetical protein NGA_0345402 [Nannochloropsis ... [more]
CBN78540.16.800e-8957.57Haloacid dehalogenase-like hydrolase [Ectocarpus s... [more]
CEM22042.16.100e-8257.46unnamed protein product [Vitrella brassicaformis C... [more]
XP_004973750.15.600e-6751.88haloacid dehalogenase-like hydrolase domain-contai... [more]
XP_020083071.15.600e-6755.19haloacid dehalogenase-like hydrolase domain-contai... [more]
XP_018842902.12.800e-6652.40PREDICTED: haloacid dehalogenase-like hydrolase do... [more]
PON47640.13.600e-6654.13HAD hydrolase, subfamily IA [Parasponia andersonii... [more]
XP_011022811.16.200e-6648.77PREDICTED: haloacid dehalogenase-like hydrolase do... [more]
PON90921.18.100e-6654.13HAD hydrolase, subfamily IA [Trema orientalis][more]
XP_018860336.11.800e-6554.29PREDICTED: haloacid dehalogenase-like hydrolase do... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004317NSK004317Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01120.1NO25G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546474gene_8597Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g26gene8800Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01120.1NO25G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01120 ID=NO25G01120|Name=NO25G01120|organism=Nannochloropsis oceanica|type=gene|length=1517bp
ACACACAGGCAGGAGCAGCTGGGGAGTCCCAGGCTGCCCACTTTCACGGC
CCACGGTTGCTTACGCTTGCTCTTCCTCCGCTTTATGCAAGTCAAGCTCG
CTCTCAGATCTAAGCCAAGCAGCACCATTACCATACGACCCTTTAAAGAC
AGCATGCGACCCTTTGGCAACGCCCTCTTACTCCTCGTCCTCATCCCTGC
CATGCTTATGACGCATGCCTTTCTCTTGCCAGCGTCTGTCTTGTCCTCCT
CCAAGTCGATCTCAGCGTCGCGCGAAAGGCAGCAGCAGCCGCGAGGAGGA
GCTGCGATGAGACTCTATACCGGTGGTCCTGCCGCTAGCCAAGACTGGGC
GTTAATTTTTGACTGCGACGGTGTCATTCTTGAGgcacgtacatgatgct
tatggaatcctgccgctatagtcaatttccatcgtatcctgccatcgtgc
ccacattcatttctccctttctccctccccttccctcccctaccttcttt
tcttagTCCGAATCCCTTCATCGTGAAGCCTACAATGCTATGTTCCGTGA
ATTTCAAATTTCCTATCACTGGAACGAAGAGTACTACGACGAGCTACAAA
ATAAAATCGGAGGCGGCATTCCTAAGATGCGCTATTACTTTGGAGAACAC
GGCTGGCCATCTTCCTCCCTCGGTTCCTCTCCCCCTTCCTCTTCGGAGGA
TAAAGAAAAGATGTTGAACACATTGCAGGATCGGAAAACTGATATATACA
AGGACATGATAAGGGGTGGTACGGCTCAGGTTCGCCCTGGTGTGCTACGA
TTGATCAAGGAGGCGAGAGCATTGAAGGAGGGAGGGAGGGAGGGAGGGGC
TCCGAAGCTGGCGATTTGCTCGGCATCGACCAAGACTAGTTGTTTGTTTG
TACTGGATAACTTGTTGGGGGAGGAAGTATTGCAGAATTTTGATTTGATT
TTGGCGGGGGATGACGTCAAGAACCGGAAGCCTGACCCGGAGATTTATAG
CATGGCAAGCGAGAGgtaggaagggagggtgaggtgggagggaaggagga
gtaaaatcgggggccaaagggatttaaatggatctatgcggatatgtgat
atatctctgtatgctttgttgtgcgatacagtctacatatgactctttcc
ggtaagcgggcgtacgtctttttcctttgcttacgctcccttccacgctt
cattccccctgtaatagGCTCGGCATCCCCGCCAGCCGCTCCGTCGTCAT
CGAAGACAGCCTCATTGGGCTTCAAGCTGCGCTAGGTGCCAAAATGCCGT
GCATCATCACGTCCACACCTTCGACCAGGGGCCAGGATTTCACGGCGGCT
CACGCTGTGTTTACTGAGCTAGGGGACGGAGACGGCATTCAGGTGACGGC
CAAACAATTGAGGGATATAGCGCTGGGCAACTCAAAAGGGTTTGGAAAGT
AGAAGCAGATGTCTTGAACAGATCGATGAAGAAAAAGTGAAATGAAAAAC
TGAGAGTAGATGGGGTG
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protein sequence of NO25G01120.1

>NO25G01120.1-protein ID=NO25G01120.1-protein|Name=NO25G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MQVKLALRSKPSSTITIRPFKDSMRPFGNALLLLVLIPAMLMTHAFLLPA
SVLSSSKSISASRERQQQPRGGAAMRLYTGGPAASQDWALIFDCDGVILE
SESLHREAYNAMFREFQISYHWNEEYYDELQNKIGGGIPKMRYYFGEHGW
PSSSLGSSPPSSSEDKEKMLNTLQDRKTDIYKDMIRGGTAQVRPGVLRLI
KEARALKEGGREGGAPKLAICSASTKTSCLFVLDNLLGEEVLQNFDLILA
GDDVKNRKPDPEIYSMASERLGIPASRSVVIEDSLIGLQAALGAKMPCII
TSTPSTRGQDFTAAHAVFTELGDGDGIQVTAKQLRDIALGNSKGFGK*
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