NO25G01110, NO25G01110 (gene) Nannochloropsis oceanica

Overview
NameNO25G01110
Unique NameNO25G01110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1993
Alignment locationchr25:307278..309270 -

Link to JBrowse

Properties
Property NameValue
DescriptionFad-dependent pyridine nucleotide-disulfide oxidoreductase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:307278..309270 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
Homology
BLAST of NO25G01110 vs. NCBI_GenBank
Match: EWM21650.1 (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 540.4 bits (1391), Expect = 6.800e-150
Identity = 326/568 (57.39%), Postives = 386/568 (67.96%), Query Frame = 0
Query:   21 GKTRSTRRSLPLLLLCFLAFLGPAPASAF--LRGLSPNSKSNSVSRRCLAAXXXXXXXXXXXXXXXPHVVVGGAGFGGLYSALRLAELSRTS-HGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMA---AAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPS-------SSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLVFQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWVKGRTEKLKGA 576
            G+T S   +    L   +AFL     +AF  LR +  ++++ +    C++                P VVV G GFGGLYSALRL+ELSR S + PPSIDITLVDRHDRFVFLPLLYELA+GDA  EEVAP F++LLASTGIRFVQGE+E +D+ GK V + +   A EV E  +E     S                    ++L+YDKLVLALGSEP+LPP +       S S     VMPFY L DA ALR +L  ++  ++                         YSGVELAANLA RLGRD+G+VTL++RGYQILG SP  VRA+AGK+LEEEGVEVMLGVDV++V   RVVV+D         RAA     XXXXXXXXXX E  ++L ADLVVWTAGA+VS V+ ++EGL+KD RGK++TD GLRA GS GD+YV+GD+AAV GYRGGGP GS GE E+VLPSTAQVAFQESEV AWN+WSS+TP APGPL FQYTPLGEMLTLGP D  IS LQGM NLEGP+ASLARRLVY+MRMPTG QRLKAAK W KGRT K+KGA
Sbjct:   23 GRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMS-------IESSSSKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGS-------------------SKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSS-------------PTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRD---------RAAETQGKXXXXXXXXXXXEGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAWAKGRTAKVKGA 542          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: XP_005853852.1 (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22510.1 NADH dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 256.9 bits (655), Expect = 1.500e-64
Identity = 154/280 (55.00%), Postives = 183/280 (65.36%), Query Frame = 0
Query:   96 GLYSALRLAELSRTS-HGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMA---AAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPS-------SSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVV 365
            GLYSALRL+ELSR S + PPSIDITLVDRHDRFVFLPLLYELA+GDA  EEVAP F++LLASTGIRFVQGE+E +D+ GK V + +   A EV E  +E     S                    ++L+YDKLVLALGSEP+LPP +       S S     VMPFY L DA ALR +L  ++  ++                         YSGVELAANLA RLGRD+G+VTL++RGYQILG SP  VRA+AGK+LEEEGVEVMLGVDV++V   RVV
Sbjct:   80 GLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGS-------------------SKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSS-------------PTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVV 327          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: CBN78924.1 (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus])

HSP 1 Score: 243.0 bits (619), Expect = 2.200e-60
Identity = 180/504 (35.71%), Postives = 257/504 (50.99%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQL----HQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDR---GKVTL-IDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLR----AG--GSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLVFQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWVKGRTEKLKGAV 577
            + V G GFGGLY+ALRL ++      P    +TLVD+ D+F FLPLLYE A+G+A L+EVAP+F+ LLA +G+ FVQG + N+D+ GK V +  A   D +G        + +D A E            RTL YDKLVLA+G+E     P+S  D++     + +PFY +ED+  +++ +  L                              Y+GVEL+ NLA  LG  R   GKV + +  G ++L  +    R    ++L E GV VM G  V +V +   VV  +       +                        + ADL+VWTAG++ S ++ S++ + KDARG+I  D+ LR    AG  G  GD+Y LGD AAV G                L   AQVA Q+S+ VA+N+W+        PL F++  LGEM+ LG LDG++++L G + L G  A LARR VY +RMPT PQR++AA     G    +  A+
Sbjct:  100 ICVLGGGFGGLYTALRLQKMPWRGRRPV---VTLVDKRDKFTFLPLLYEFAIGNAELDEVAPTFRELLAGSGVSFVQGCVSNIDLDGKGVTVAGATSDDLDGF-------MISDNADE-----------TRTLEYDKLVLAVGAE-----PASGIDKVPGARERAIPFYSIEDSYRVKQAIIKLK------------ALVREKAVSRVVVVGGSYAGVELSCNLATELGGGRKGMGKVEVTLAAGSEVLSMATPGNREAGLRRLTESGVHVMKGARVSEVKEGGGVVLQQGEGKGTDSTFREE-------------------IMADLLVWTAGSQPSSLLDSLD-VRKDARGRIEVDRRLRLIDAAGNDGGVGDVYCLGDIAAVEGLE--------------LGCNAQVALQQSDYVAYNIWAD--KERRKPLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNPQRVRAAASAAAGTAFSVTNAI 529          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_106255270.1 (NAD(P)/FAD-dependent oxidoreductase [Leptolyngbya frigida] >PSB32663.1 FAD-dependent oxidoreductase [Leptolyngbya frigida ULC18])

HSP 1 Score: 212.2 bits (539), Expect = 4.200e-51
Identity = 163/480 (33.96%), Postives = 234/480 (48.75%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            + + G GFGGLY+ALRL++L  T H  P  ++TLVDR DRF+F PLLYEL  G+    E+AP F+ LLA TG+RF QG + +VD+  K V L       ++G                              LS+D+LVL+LG E  L     +++     +PF  + DA  L ERL  L                              Y+GVELA  LA RLG +RG+V L+++  QIL  SP   RA A K LE  GV + L   V  ++ E + +  +                                +  DLV+WT G +V+ VI ++  L K+ARG+I+    L+    N D++ LGD               + +G++V P+TAQ AFQ+SE V WN+W+S+T     PL+ F+Y  LGEM+ LG  +  ++ L     L+GP A +ARRL Y+ RMPT   +++    W+
Sbjct:    8 ICILGGGFGGLYTALRLSQLPWTKHEKP--EVTLVDRSDRFLFSPLLYELMTGELQTWEIAPPFEELLAGTGVRFHQGTVTDVDLVTKHVQL-------QDG----------------------------HRLSFDRLVLSLGGETPLDRVPGTAE---YALPFRSITDAYRLEERLRTLE--------------ESDAEKIRVAIVGAGYAGVELACKLADRLG-ERGRVRLVEQADQILRTSPDFNRAAATKALEARGVWLDLETGVEAIAAETIALAYKGNVDT---------------------------IPVDLVLWTVGTRVAEVINNLP-LKKNARGQIVVTPTLQT-VDNPDVFSLGDLV----------DSKDADGQQV-PATAQAAFQQSEYVGWNLWASLTDR---PLLPFRYQHLGEMMALGTDNATLTGLG--FKLDGPFAYVARRLAYLYRMPTLEHQVRVGLNWI 387          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_017659895.1 (NAD(P)/FAD-dependent oxidoreductase [Geitlerinema sp. PCC 7105])

HSP 1 Score: 210.7 bits (535), Expect = 1.200e-50
Identity = 165/480 (34.38%), Postives = 237/480 (49.38%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            +V+ G GFGGLY+AL L+ L  T    P  +ITLVDR+DRFVF PLLYEL   +    E+AP F  LLA+T I+F Q  ++++D+    V L      D++G                             +L YD+LVLA+G E    P + +     + +PF  + DA  +RERL  L                              YSGVE+A  LA RLG +RG++ ++DR   IL  SP   R  A + L + GV + L  DV +V+ E + +K R +                        DE    +  DLV+WT G  V+ V++S+   D++ RG+I+T+  L+       I+ +GD AA     G           + +P+TAQ AFQ+++  AWNVW S+T     PL+ F+Y  LGEM+TLG LD A  S  G ++L+GP A +ARRL Y+ R+PT   +LK    W+
Sbjct:    8 IVILGGGFGGLYTALNLSRLPWTPAEKP--EITLVDRNDRFVFAPLLYELVTDELQTWEIAPPFVELLANTEIQFRQASVKSIDLDSHQVHL------DDDG----------------------------DSLPYDRLVLAMGGE---TPLNGTPGVAERAIPFRTVADAYRVRERLRQLESSDA--------------DKIRVAIVGGGYSGVEIACKLADRLG-NRGRIRIVDRNDTILRNSPEFNRNAAKRALSDRGVWLDLETDVTQVTAETISLKYREQ-----------------------IDE----IPVDLVLWTVGTTVAPVVRSLP-FDRNDRGQILTNAKLQV-IDRPHIFAVGDVAATYDING-----------QRVPTTAQAAFQQADYAAWNVWGSLTHR---PLLPFRYQNLGEMMTLG-LDNATLSGLG-LSLDGPLAHIARRLAYLYRLPTPEHQLKVGLNWI 388          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: OWY68239.1 (FAD-dependent oxidoreductase [cyanobacterium TDX16])

HSP 1 Score: 210.7 bits (535), Expect = 1.200e-50
Identity = 167/481 (34.72%), Postives = 235/481 (48.86%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGM-INLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            + + G GFGGLY+ALRL++L   S  P   +I L+DR DRF+F PLLYEL  G+    E+AP F  LLASTGIRF QGE   +DI  + V L       ++G+E                            + YD+LVLALG E  L   S +S       PF  L DA  + ERL LL   T                          YSGVELA  LA RLG +RG+  L++   QIL  SP   R  A K LE+ G+ + L   V  +    + ++ + +                             I+  DLVVWT G +V+ +++S+  L ++ RG++     L+      +I+ LGD A  R          +  G++V P TAQ A Q+++  AWN+W+S+T     PL+ F+Y  LGEM+TLG +D A  +L G+ I LEGP A++ARRL Y+ R+PT   ++K    W+
Sbjct:    8 ICILGGGFGGLYTALRLSQLPWESEKP---EIVLIDRSDRFLFSPLLYELLAGELQTWEIAPPFIELLASTGIRFCQGEAAEIDIYEQRVRL-------QDGIE----------------------------IPYDRLVLALGGETPLDMVSGASS---YAFPFRTLADAYRMEERLRLLEASTA--------------DKIRVAIVGAGYSGVELACKLADRLG-ERGRFRLVELSDQILRTSPEFNREAATKALEKRGIWLDLETKVESIEPNAIALEYKNQVD---------------------------IIPVDLVVWTVGTRVAPIVRSLP-LKQNQRGQLTATSTLQV-TDRPEIFALGDLAECR----------DAAGQQV-PGTAQAAVQQADYAAWNIWASLTQR---PLLPFRYQNLGEMMTLG-IDNA--TLAGLGIKLEGPLAAIARRLAYLYRLPTLEHQIKVGINWI 386          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_015156990.1 (MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase [Cyanobacteria] >AFY90452.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Chroococcidiopsis thermalis PCC 7203] >PSB45631.1 NAD(P)/FAD-dependent oxidoreductase [Cyanosarcina cf. burmensis CCALA 770] >PSB65505.1 NAD(P)/FAD-dependent oxidoreductase [Chroococcidiopsis cubana CCALA 043])

HSP 1 Score: 209.1 bits (531), Expect = 3.600e-50
Identity = 166/482 (34.44%), Postives = 235/482 (48.76%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSE-PILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGM-INLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            + + G GFGGLY+ALRL++L   S  P   +I L+DR DRF+F PLLYEL  G+    E+AP F  LLASTGIRF QGE   +DI  + V L       ++G+E                            + YD+LVLALG E P+   P +SS       PF  L DA  + ERL LL   T                          YSGVELA  LA RLG +RG+  L++   QIL  SP   R  A K LE+ G+ + L   V  +    + ++ + +                             I+  D+VVWT G +V+ +++S+  L ++ RG++     L+      +I+ LGD A  R              E+ +P TAQ A Q+++  AWN+W+S+T     PL+ F+Y  LGEM+TLG +D A  +L G+ I LEGP A++ARRL Y+ R+PT   ++K    W+
Sbjct:    8 ICILGGGFGGLYTALRLSQLPWESEKP---EIVLIDRSDRFLFSPLLYELLTGELQTWEIAPPFVELLASTGIRFCQGEAAEIDIYEQRVRL-------QDGIE----------------------------IPYDRLVLALGGETPLDMVPGASS----YAFPFRTLADAYRMEERLRLLEASTA--------------DKIRVAIVGGGYSGVELACKLADRLG-ERGRFRLVELSDQILRTSPEFNREAATKALEKRGIWLDLETKVESIEPNAIALEYKNQVD---------------------------IIPVDIVVWTIGTRVAPIVRSLP-LKQNQRGQLTATSTLQV-IDRPEIFALGDLAECR-----------DAAEQQVPGTAQAAVQQADYAAWNIWASLTHR---PLLPFRYQNLGEMMTLG-IDSA--TLTGLGIKLEGPLAAIARRLAYLYRLPTLDHQIKVGINWI 386          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_106545509.1 (NAD(P)/FAD-dependent oxidoreductase [Chroococcidiopsis sp. CCALA 051] >PSM49282.1 FAD-dependent oxidoreductase [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 209.1 bits (531), Expect = 3.600e-50
Identity = 167/482 (34.65%), Postives = 235/482 (48.76%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSE-PILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGM-INLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            + + G GFGGLY+ALRL++L   S  P   +I L+DR DRF+F PLLYEL  G+    E+AP F  LLASTGIRF QGE   +DI  + V L       ++G+E                            +SYD+LVLALG E P+   P +SS       PF  L DA  + ERL LL   T                          YSGVEL   LA RLG +RG+  L++   QIL  SP   R  A K LE+ G+ + L   V  +    + ++ + +                             I+  DLVVWT G +V+ +++S+  L ++ RG++     L+      +I+ LGD A  R              E+ +P TAQ A Q+++  AWN+W+S+T     PL+ F+Y  LGEM+TLG +D A  +L G+ I LEGP A++ARRL Y+ R+PT   ++K    W+
Sbjct:    8 ICILGGGFGGLYTALRLSQLPWESEKP---EIVLIDRSDRFLFSPLLYELLTGELQTWEIAPPFVELLASTGIRFCQGEGAEIDIYEQRVRL-------QDGIE----------------------------ISYDRLVLALGGETPLDMVPGASS----YAFPFRTLADAYRMEERLRLLEASTA--------------DKIRVAIVGAGYSGVELVCKLADRLG-ERGRFRLVELSDQILRTSPEFNREAATKALEKRGIWLDLETKVESIEPNAIALEYKNQVD---------------------------IIPVDLVVWTIGTRVAPIVRSLP-LKQNQRGQLTATSTLQV-IDRPEIFALGDLAECR-----------DAAEQQVPGTAQAAVQQADYAAWNIWASLTHR---PLLPFRYQNLGEMMTLG-IDSA--TLTGLGIKLEGPLAAIARRLAYLYRLPTLDHQIKVGINWI 386          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_063716209.1 (NAD(P)/FAD-dependent oxidoreductase [Leptolyngbya valderiana] >OAB62095.1 NADH dehydrogenase [Leptolyngbya valderiana BDU 20041])

HSP 1 Score: 208.8 bits (530), Expect = 4.700e-50
Identity = 164/480 (34.17%), Postives = 236/480 (49.17%), Query Frame = 0
Query:   87 VVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWV 566
            +V+ G GFGGLY+AL L+ L  T    P  +ITLVDR+DRFVF PLLYEL   +    E+AP F  LLA+T I+F Q  ++++D+    V L      D++G                             +L YD+LVLA+G E    P + +     + +PF  + DA  +RERL  L                              YSGVE+A  LA RL  +RG++ ++DR   IL  SP   R  A + L + GV + L  DV +V+ E + +K R +                        DE    +  DLV+WT G  V+ V++S+   D++ RG+I+T+  L+       I+ +GD AA     G           + +P+TAQ AFQ+++  AWNVW S+T     PL+ F+Y  LGEM+TLG LD A  S  G ++L+GP A +ARRL Y+ R+PT   +LK    W+
Sbjct:    8 IVILGGGFGGLYTALNLSRLPWTPAEKP--EITLVDRNDRFVFAPLLYELVTDELQTWEIAPPFVELLANTEIQFRQASVKSIDLDSHQVHL------DDDG----------------------------DSLPYDRLVLAMGGE---TPLNGTPGVAERAIPFRTVADAYRVRERLRQLESSDA--------------DKIRVAIVGGGYSGVEIACKLADRL-ENRGRIRIVDRNDTILRNSPEFNRNAAKRALSDRGVWLDLETDVTQVTAETISLKYREQ-----------------------IDE----IPVDLVLWTVGTTVAPVVRSLP-FDRNDRGQILTNAKLQV-VDRPHIFAVGDVAATYDING-----------QRVPTTAQAAFQQADYAAWNVWGSLTHR---PLLPFRYQNLGEMMTLG-LDNATLSGLG-LSLDGPLAHIARRLAYLYRLPTPEHQLKVGLNWI 388          
BLAST of NO25G01110 vs. NCBI_GenBank
Match: WP_096829174.1 (NAD(P)/FAD-dependent oxidoreductase [Tychonema bourrellyi] >PHX54789.1 NAD(P)/FAD-dependent oxidoreductase [Tychonema bourrellyi FEM_GT703])

HSP 1 Score: 208.8 bits (530), Expect = 4.700e-50
Identity = 162/489 (33.13%), Postives = 233/489 (47.65%), Query Frame = 0
Query:   85 PHVVVGGAGFGGLYSALRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSFKALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTDAAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPFYRLEDAQALRERLSLLNLDTTXXXXXXXXXXXXXXXXXXXXXXXXXYSGVELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVMLGVDVLKVSKERVVVKDRARASAAGARAANGMEXXXXXXXXXXXDEATIILAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVLGDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPSAPGPLV-FQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMRMPTGPQRLKAAKGWVKGRTEKL 573
            P + + G GFGGLY+ALRL++L  +    P  +I LVD+ DRF+F+PLLYEL  G+    E+AP F  LL +TG+RF QG +  +D++ K V L    E +                                    D+LVLALG E    P       +     F  L+DA  L ERL  L    T                         YSGVELA  LA RLG D+G+V LI++G  IL  SP   R +A K LE+  V + L   V  +  + + +  + +                             +L  D+V+WT G +VS+ ++S+  L ++ RG++IT+  L+    + DI+ LGD A      G           + LP+TAQ AFQ+++  AWN+W+S+      PL+ F+Y PLGEM+TLG +D A  S  G I L+G  A +ARRL Y+ RMPT   ++K    W+    ++L
Sbjct:    6 PRICILGGGFGGLYTALRLSQLPFSKAEKP--EIVLVDKRDRFLFVPLLYELITGELQTWEIAPPFVELLENTGVRFCQGTVSGIDVETKRVQLHDGPEFE-----------------------------------CDRLVLALGGE---TPLDMVKGAVEYAYSFRSLDDAYRLEERLRFLEAKET--------------DKIRIAIVGAGYSGVELACKLADRLG-DKGRVRLIEQGDTILRTSPEFNRESATKVLEKRQVWIDLETAVEAIGSDTISLLYKGQLD---------------------------VLPVDIVLWTVGTQVSQAVRSLP-LKQNQRGQLITNPTLQI-IDHPDIFALGDLAECHDETG-----------QKLPTTAQTAFQQADYTAWNIWASL---CDRPLLPFRYQPLGEMMTLG-IDNATLSGLG-IQLDGQLAHIARRLAYLYRMPTFDHQVKVGFNWISKPIQEL 394          
The following BLAST results are available for this feature:
BLAST of NO25G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21650.16.800e-15057.39fad-dependent pyridine nucleotide-disulfide oxidor... [more]
XP_005853852.11.500e-6455.00NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
CBN78924.12.200e-6035.71NADH dehydrogenase (ubiquinone) [Ectocarpus silicu... [more]
WP_106255270.14.200e-5133.96NAD(P)/FAD-dependent oxidoreductase [Leptolyngbya ... [more]
WP_017659895.11.200e-5034.38NAD(P)/FAD-dependent oxidoreductase [Geitlerinema ... [more]
OWY68239.11.200e-5034.72FAD-dependent oxidoreductase [cyanobacterium TDX16... [more]
WP_015156990.13.600e-5034.44MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase ... [more]
WP_106545509.13.600e-5034.65NAD(P)/FAD-dependent oxidoreductase [Chroococcidio... [more]
WP_063716209.14.700e-5034.17NAD(P)/FAD-dependent oxidoreductase [Leptolyngbya ... [more]
WP_096829174.14.700e-5033.13NAD(P)/FAD-dependent oxidoreductase [Tychonema bou... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004318NSK004318Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01110.1NO25G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559762gene_8596Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g27gene8801Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01110.1NO25G01110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01110 ID=NO25G01110|Name=NO25G01110|organism=Nannochloropsis oceanica|type=gene|length=1993bp
ATGGCAATATCCTCTATAAACCGCCAGCCGGCGACGGGGGCATCTTGTAA
CAGCACCAGTGGCAAAACGCGCAGCACACGACGCTCTTTGCCCCTTCTCC
TCCTCTGTTTCCTGGCCTTTCTCGGTCCCGCCCCCGCCTCCGCTTTCCTC
CGTGGTCTCAGTCCAAATTCCAAGAGCAACAGCGTGAGCAGGAGATGCTT
GGCAGCCCGGCGCGTCGTCATGTCGGGCTCGTCTTCCTCGTCAAACTgta
agtgtggagtcaaacatgtcccgcttacctgactcatccatcatcggccc
tagaaatgaccccccgagcacatcagcatcatttgattgccaataagcac
acttgtccctctatcatgtttctgagtgtgccatttaaacgtttctgttc
ccttctcctgccatttaacccaaacttcctgactcatccctccccccctc
gctctccccccctccctccctcactccagCCCGCCCGCACGTCGTCGTCG
GTGGCGCGGGTTTCGGGGGGCTTTACAGCGCCCTGCGTTTAGCCGAACTT
TCTCGCACCTCTCATGGGCCTCCGTCTATCGACATTACCCTGGTAGATCG
GCATGATCGATTTGTGTTTTTGCCGTTGTTGTACGAGTTGGCGGTGGGAG
ATGCAGGCTTGGAGGAAGTAGCGCCGTCGTTTAAGGCCTTGTTGGCATCC
ACAGGGATAAGATTCGTGCAGGGGGAGATAGAGAATGTCGACATCAAAGG
GAAAACTGTAATGCTGATGGCGGCTGCGGAGGTGGACGAGGAAGGGATGG
AGGGAGGGAAGGAGAGATCGGTTTCGACAGACGCTGCAATTGAAGATGTA
GAGCAGCAGCAGGAGGCGGTGATCGCCCCTCGCACCCTTTCTTACGACAA
GCTCGTCCTAGCCCTCGGATCAGAACCGATCCTCCCTCCTCCCTCCTCCT
CTTCAGATCAACTGCATCAAGTCATGCCCTTTTACCGCCTCGAAGACGCC
CAAGCCCTCCGGGAACGCTTATCCCTCCTCAATCTTGACACAACCTTTTC
CTCCCCTCCGCCCTCGTCGTCGTCCTCGTCCTCGCCCTCCCTCTTCCGGG
TCGTCATCGTCGGGGGGGGCTACTCTGGAGTTGAGCTCGCGGCGAATCTT
GCGGCAAGGTTAGGGAGGGACCGAGGGAAAGTCACATTGATAGACAGAGG
GTATCAAATCTTGGGAGGAAGCCCTGCACAGGTGCGAGCGAATGCGGGGA
AGAAGTTGGAGGAGGAAGGTGTGGAAGTGATGCTTGGGGTGGATGTGTTG
AAAGTAAGTAAGGAGAGGGTGGTCGTCAAGGACCGGGCCCGTGCCTCTGC
AGCTGGAGCGAGAGCAGCGAATGGGATGGAGGGAGGGGAGGGGGAAGGGA
AGGAGGAAGGGGAGGATGAGGCCACCATAATCTTAGCTGCGGATTTGGTG
GTGTGGACAGCAGGCGCAAAGGTCTCTCGAGTCATCCAGTCTATCGAAGG
CTTGGATAAAGACGCGCGAGGGAAAATCATTACAGATCAGGGCTTGAGAG
CAGGTGGTTCTAATGGTGATATCTATGTCCTTGGTGACAGTGCCGCTGTA
CGTGGATATCGTGGGGGAGGCCCAGCTGGAAGTGAGGGTGAGGGAGAAAA
AGTCTTGCCTTCTACTGCACAAGTGGCTTTTCAGGAGTCAGAAGTGGTGG
CATGGAATGTTTGGTCGAGTGTCACGCCCTCTGCGCCTGGCCCGCTTGTG
TTTCAATATACCCCCTTGGGCGAGATGCTGACCTTGGGGCCTCTCGATGG
CGCAATTTCCTCACTGCAGGGGATGATTAATCTGGAGGGCCCCACCGCGA
GCTTGGCGAGGAGGTTAGTGTATGTCATGCGGATGCCCACGGGACCACAG
CGGCTCAAAGCTGCGAAGGGATGGGTGAAGGGACGGACGGAGAAATTGAA
GGGCGCGGTAAGGGGGGTGGCCGCCGGAAAGGCGGAGCAGTAG
back to top

protein sequence of NO25G01110.1

>NO25G01110.1-protein ID=NO25G01110.1-protein|Name=NO25G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=587bp
MAISSINRQPATGASCNSTSGKTRSTRRSLPLLLLCFLAFLGPAPASAFL
RGLSPNSKSNSVSRRCLAARRVVMSGSSSSSNSRPHVVVGGAGFGGLYSA
LRLAELSRTSHGPPSIDITLVDRHDRFVFLPLLYELAVGDAGLEEVAPSF
KALLASTGIRFVQGEIENVDIKGKTVMLMAAAEVDEEGMEGGKERSVSTD
AAIEDVEQQQEAVIAPRTLSYDKLVLALGSEPILPPPSSSSDQLHQVMPF
YRLEDAQALRERLSLLNLDTTFSSPPPSSSSSSSPSLFRVVIVGGGYSGV
ELAANLAARLGRDRGKVTLIDRGYQILGGSPAQVRANAGKKLEEEGVEVM
LGVDVLKVSKERVVVKDRARASAAGARAANGMEGGEGEGKEEGEDEATII
LAADLVVWTAGAKVSRVIQSIEGLDKDARGKIITDQGLRAGGSNGDIYVL
GDSAAVRGYRGGGPAGSEGEGEKVLPSTAQVAFQESEVVAWNVWSSVTPS
APGPLVFQYTPLGEMLTLGPLDGAISSLQGMINLEGPTASLARRLVYVMR
MPTGPQRLKAAKGWVKGRTEKLKGAVRGVAAGKAEQ*
back to top
Synonyms
Publications