NO25G00990, NO25G00990 (gene) Nannochloropsis oceanica

Overview
NameNO25G00990
Unique NameNO25G00990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1453
Alignment locationchr25:278754..280206 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:278754..280206 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00990.1NO25G00990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00990.1NO25G00990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00990 ID=NO25G00990|Name=NO25G00990|organism=Nannochloropsis oceanica|type=gene|length=1453bp
ATGTTGGACAACAGCTCCTACACTACCGTGATGgtagattgccaggagca
ctagaatgttttcccctcctcccaagaaccgaggcaggcgtgcgtggcac
gcggctgttttgtttactgccgccgcacccacctatcccccccccctccc
ttccctccttcctacccacccatgcgccacacaccccacacccacagCTA
ATTCCCCCGCGCGTCAGCCTGGAGGTGAACGACAGTATCGTGGCCACACC
AAAGGGACAGGAGGGTGCCGAGGCAGGCgtgcgtggcacgcggctgtttt
gtttactgccgccgcacccacctatcccccccctccctcctatccaccca
ttcaccgcgccgcgccacacaccccacacccacagCTAATTCCCCCGCGC
GTCAGCCTGGAGGTGAACGACAGTATCGTGGCCACACCAAAGGGACAGGA
GGGTGCCGAGGCAGGCgtgcgtggcacgcggctgttttgtttactgccgc
cgcacccacctatcccccccccccccctccgttccctccttcaaacccac
ccactcaccgcgactgcaacttacatgttgccattatgccaaggacaaca
ccaccctccattagagccgtcaaacttcctctctattttccccccctccc
cccccccccctcctcaaaccacagACAAAGGTACACCTCGATTGTGGGCA
GCGTCTAAACCCAATTGCGAGAAGGGCAGAAGGAGAAGGAGGTGATGGAG
GAGAAGGAGGTGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGAGGAGGAGAAGGGGGAGGAGGCGGAGGAGGAGAAGAAGAGGAGGAAGA
AGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAGGTAAAAGAGGAAG
AAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAA
GGAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGAAGAGGA
AGAAGAAGAAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGGAGACGATGCG
TTTCCGAGGACCGTATTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGG
ACGGCAATGGGGCACGCAACATCCTGCGGGTGTACAGGAGTATGGTCCGT
GGAGAAGCTCGTCCCCGTGATCTTCGGTTTGGTCAACCGCGGCAGGATAT
GCGGACACTCTATGTGTAGCGTTCCCGCTGACCTCCTCTTTTTTTTCCTC
CTTTCCCTTCTCCTCCTGGCCCTGCGTGAGCCGTCCGGGGACTTTGCCAG
GTCAAAAAACCTGTCAAAGTCGCTAATTAGACTCGGACAAGGAAATAAGG
GATGACAACAATTTATTGTTGGGAGGCTCCCCCTCGTATGCAAGTCCTCG
AGGACGTCAGGTTGCATGCGATAGTTCTAGAGGGATGTAGGAACGCCAAA
AAG
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protein sequence of NO25G00990.1

>NO25G00990.1-protein ID=NO25G00990.1-protein|Name=NO25G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MLDNSSYTTVMLIPPRVSLEVNDSIVATPKGQEGAEAGLIPPRVSLEVND
SIVATPKGQEGAEAGTKVHLDCGQRLNPIARRAEGEGGDGGEGGGEGGGG
GGGGGGGGGGEGGGGGGGEEEEEEEDEQEEEGGEEEVKEEEEEEEEEEEE
EEEEEKEGEEEKEEEEEEEEEEEEEEEGGGGGGGGGGRRCVSEDRIGVTP
VNSSCPGTAMGHATSCGCTGVWSVEKLVPVIFGLVNRGRICGHSMCSVPA
DLLFFFLLSLLLLALREPSGDFARSKNLSKSLIRLGQGNKG*
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Synonyms
Publications