NO25G00990.1, NO25G00990.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G00990.1
Unique NameNO25G00990.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length974
Alignment locationchr25:278754..280206 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:278754..280206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00990NO25G00990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G00990.1NO25G00990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G00990.1.cds1NO25G00990.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00990.1.cds2NO25G00990.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00990.1.cds3NO25G00990.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00990.1.cds4NO25G00990.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G00990.1 ID=NO25G00990.1|Name=NO25G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=974bp
ATGTTGGACAACAGCTCCTACACTACCGTGATGCTAATTCCCCCGCGCGT
CAGCCTGGAGGTGAACGACAGTATCGTGGCCACACCAAAGGGACAGGAGG
GTGCCGAGGCAGGCCTAATTCCCCCGCGCGTCAGCCTGGAGGTGAACGAC
AGTATCGTGGCCACACCAAAGGGACAGGAGGGTGCCGAGGCAGGCACAAA
GGTACACCTCGATTGTGGGCAGCGTCTAAACCCAATTGCGAGAAGGGCAG
AAGGAGAAGGAGGTGATGGAGGAGAAGGAGGTGGAGAAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGAAGGGGGAGGAGGCGGAGG
AGGAGAAGAAGAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGGAG
AGGAAGAGGTAAAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAAAGAAGGAGAAGAAGAAAAAGAAGAGGAAGAAGA
AGAAGAAGAGGAGGAAGAGGAAGAAGAAGAAGGGGGAGGAGGAGGAGGAG
GAGGAGGAGGGAGACGATGCGTTTCCGAGGACCGTATTGGTGTGACACCT
GTGAACAGTTCGTGTCCCGGGACGGCAATGGGGCACGCAACATCCTGCGG
GTGTACAGGAGTATGGTCCGTGGAGAAGCTCGTCCCCGTGATCTTCGGTT
TGGTCAACCGCGGCAGGATATGCGGACACTCTATGTGTAGCGTTCCCGCT
GACCTCCTCTTTTTTTTCCTCCTTTCCCTTCTCCTCCTGGCCCTGCGTGA
GCCGTCCGGGGACTTTGCCAGGTCAAAAAACCTGTCAAAGTCGCTAATTA
GACTCGGACAAGGAAATAAGGGATGACAACAATTTATTGTTGGGAGGCTC
CCCCTCGTATGCAAGTCCTCGAGGACGTCAGGTTGCATGCGATAGTTCTA
GAGGGATGTAGGAACGCCAAAAAG
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protein sequence of NO25G00990.1

>NO25G00990.1-protein ID=NO25G00990.1-protein|Name=NO25G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MLDNSSYTTVMLIPPRVSLEVNDSIVATPKGQEGAEAGLIPPRVSLEVND
SIVATPKGQEGAEAGTKVHLDCGQRLNPIARRAEGEGGDGGEGGGEGGGG
GGGGGGGGGGEGGGGGGGEEEEEEEDEQEEEGGEEEVKEEEEEEEEEEEE
EEEEEKEGEEEKEEEEEEEEEEEEEEEGGGGGGGGGGRRCVSEDRIGVTP
VNSSCPGTAMGHATSCGCTGVWSVEKLVPVIFGLVNRGRICGHSMCSVPA
DLLFFFLLSLLLLALREPSGDFARSKNLSKSLIRLGQGNKG*
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mRNA from alignment at chr25:278754..280206+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G00990.1 ID=NO25G00990.1|Name=NO25G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=1453bp|location=Sequence derived from alignment at chr25:278754..280206+ (Nannochloropsis oceanica)
ATGTTGGACAACAGCTCCTACACTACCGTGATGGTAGATTGCCAGGAGCA
CTAGAATGTTTTCCCCTCCTCCCAAGAACCGAGGCAGGCGTGCGTGGCAC
GCGGCTGTTTTGTTTACTGCCGCCGCACCCACCTATCCCCCCCCCCTCCC
TTCCCTCCTTCCTACCCACCCATGCGCCACACACCCCACACCCACAGCTA
ATTCCCCCGCGCGTCAGCCTGGAGGTGAACGACAGTATCGTGGCCACACC
AAAGGGACAGGAGGGTGCCGAGGCAGGCGTGCGTGGCACGCGGCTGTTTT
GTTTACTGCCGCCGCACCCACCTATCCCCCCCCTCCCTCCTATCCACCCA
TTCACCGCGCCGCGCCACACACCCCACACCCACAGCTAATTCCCCCGCGC
GTCAGCCTGGAGGTGAACGACAGTATCGTGGCCACACCAAAGGGACAGGA
GGGTGCCGAGGCAGGCGTGCGTGGCACGCGGCTGTTTTGTTTACTGCCGC
CGCACCCACCTATCCCCCCCCCCCCCCTCCGTTCCCTCCTTCAAACCCAC
CCACTCACCGCGACTGCAACTTACATGTTGCCATTATGCCAAGGACAACA
CCACCCTCCATTAGAGCCGTCAAACTTCCTCTCTATTTTCCCCCCCTCCC
CCCCCCCCCCTCCTCAAACCACAGACAAAGGTACACCTCGATTGTGGGCA
GCGTCTAAACCCAATTGCGAGAAGGGCAGAAGGAGAAGGAGGTGATGGAG
GAGAAGGAGGTGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGAGGAGGAGAAGGGGGAGGAGGCGGAGGAGGAGAAGAAGAGGAGGAAGA
AGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAGGTAAAAGAGGAAG
AAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAA
GGAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGAAGAGGA
AGAAGAAGAAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGGAGACGATGCG
TTTCCGAGGACCGTATTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGG
ACGGCAATGGGGCACGCAACATCCTGCGGGTGTACAGGAGTATGGTCCGT
GGAGAAGCTCGTCCCCGTGATCTTCGGTTTGGTCAACCGCGGCAGGATAT
GCGGACACTCTATGTGTAGCGTTCCCGCTGACCTCCTCTTTTTTTTCCTC
CTTTCCCTTCTCCTCCTGGCCCTGCGTGAGCCGTCCGGGGACTTTGCCAG
GTCAAAAAACCTGTCAAAGTCGCTAATTAGACTCGGACAAGGAAATAAGG
GATGACAACAATTTATTGTTGGGAGGCTCCCCCTCGTATGCAAGTCCTCG
AGGACGTCAGGTTGCATGCGATAGTTCTAGAGGGATGTAGGAACGCCAAA
AAG
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Coding sequence (CDS) from alignment at chr25:278754..280206+

>NO25G00990.1 ID=NO25G00990.1|Name=NO25G00990.1|organism=Nannochloropsis oceanica|type=CDS|length=876bp|location=Sequence derived from alignment at chr25:278754..280206+ (Nannochloropsis oceanica)
ATGTTGGACAACAGCTCCTACACTACCGTGATGCTAATTCCCCCGCGCGT
CAGCCTGGAGGTGAACGACAGTATCGTGGCCACACCAAAGGGACAGGAGG
GTGCCGAGGCAGGCCTAATTCCCCCGCGCGTCAGCCTGGAGGTGAACGAC
AGTATCGTGGCCACACCAAAGGGACAGGAGGGTGCCGAGGCAGGCACAAA
GGTACACCTCGATTGTGGGCAGCGTCTAAACCCAATTGCGAGAAGGGCAG
AAGGAGAAGGAGGTGATGGAGGAGAAGGAGGTGGAGAAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGAAGGGGGAGGAGGCGGAGG
AGGAGAAGAAGAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGGAG
AGGAAGAGGTAAAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAAAGAAGGAGAAGAAGAAAAAGAAGAGGAAGAAGA
AGAAGAAGAGGAGGAAGAGGAAGAAGAAGAAGGGGGAGGAGGAGGAGGAG
GAGGAGGAGGGAGACGATGCGTTTCCGAGGACCGTATTGGTGTGACACCT
GTGAACAGTTCGTGTCCCGGGACGGCAATGGGGCACGCAACATCCTGCGG
GTGTACAGGAGTATGGTCCGTGGAGAAGCTCGTCCCCGTGATCTTCGGTT
TGGTCAACCGCGGCAGGATATGCGGACACTCTATGTGTAGCGTTCCCGCT
GACCTCCTCTTTTTTTTCCTCCTTTCCCTTCTCCTCCTGGCCCTGCGTGA
GCCGTCCGGGGACTTTGCCAGGTCAAAAAACCTGTCAAAGTCGCTAATTA
GACTCGGACAAGGAAATAAGGGATGA
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Synonyms
Publications