NO25G00940, NO25G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00940 vs. NCBI_GenBank
Match: EWM21638.1 (Sulfotransferase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 582.8 bits (1501), Expect = 8.000e-163 Identity = 281/382 (73.56%), Postives = 323/382 (84.55%), Query Frame = 0 Query: 1 MLPRTCASPGRHGGGSSRWNSNISGGNASSWW-GLSLAKWAWISACVGLLGLSLNFWADTVWVGVDRGGGSVTLSHAIRHSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFKEARRVLGYPKE 382 MLPRT +SPGR+G SR NS N +W G+++ KW W+ AC+ LL LSL+FWA+TVWVGVD GGG++ LS AIR +LRL +KRPLVGTK++PLLIVGTHHKTGTALMALVLREAFSVHK +TGGK SGVMMG+FG E AP+AFYYCD LY+DTWNK+DSSS++HLPKLVDNHQFF GHYKFVHLVRDP+ELVISAYLYHH GPPDWQEVWLYE+HPLS+Y+T++ NSSCDP R MSW+D+LRCLNQKEGL+AEALFQT+FGA+PSMVAAV+HI GD +HA+VLQLGLEEFQ FD TV RMFEFLGF + V IV GCAPFDL+RQS GEKERNEHVT GKFDK KLRE+M Y+DPVF +ARRVLGY E Sbjct: 14 MLPRTYSSPGRYG---SRRNSI----NDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADE 388
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_002499699.1 (predicted protein [Micromonas commoda] >ACO60957.1 predicted protein [Micromonas commoda]) HSP 1 Score: 78.2 bits (191), Expect = 6.400e-11 Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 0 Query: 184 GHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTN-SSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVT 349 G Y+ VH+VRDP +++IS YLYH P D E WL+E P T +S D G T + +LAE L ++ A + + D R + + LE F +FDGT+ + FL F + +VG++V+ FD+ R SQ E NEH T Sbjct: 318 GEYRAVHVVRDPTQVLISGYLYHRRLPGD--ERWLFEPSPELGGGTYADRLASADKLGAT--------------DAMLAEIAMAD--DELRALALAYRDVERD---PRGMNVKLESFFEDFDGTMGAVLRFLEFEEGDVGEMVKLAGEFDVGRWSQEELAANEHFT 462
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_003058123.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH58074.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 77.4 bits (189), Expect = 1.100e-10 Identity = 50/163 (30.67%), Postives = 84/163 (51.53%), Query Frame = 0 Query: 186 YKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVT 349 Y+ VH+VRDPVE+++S +LYH P D E WL+E P+ + +G+T + D L N E ++AE L + A + + D + + LEEF +FD ++F FL F ++++ ++V+ FD++R ++ E + NEH T Sbjct: 391 YRMVHVVRDPVEVLVSGFLYHRRRPAD--EQWLFE--PVK-----------ELRGKT---YADHLTTANPAEAMMAELSMAD--DELRMLALAYRDVERD---PNAMNVKLEEFFDDFDAAAGKVFRFLRFDERDIPELVKLAGTFDMRRWTEEELKVNEHFT 530
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_001419928.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98221.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 74.3 bits (181), Expect = 9.200e-10 Identity = 73/294 (24.83%), Postives = 118/294 (40.14%), Query Frame = 0 Query: 100 VGTHHKTGTALMALVL-------REAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKS------DSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDD--PVFKEARRVLGY 379 V THHKTGTALM V ++ + V+ GK + A F D + + KS + +T L ++ Y+ VH+VRDP+++++S YH P D E WL E+S+ + L+ + K+ + AE F + A+ ++ + L L LE F+ NFD T+ R FL F + + +++ + D+ + S+ E +NEH T + D+ E DD RR +GY Sbjct: 135 VATHHKTGTALMHDVFSTIANRSSPPYTFFDVRAFEDAELVVNEVTGKGLERAARRRFREADIVLDYHFGKSLPAFIEQNETTRLLQSMISVSN--AREYRIVHVVRDPLDVLVSGLAYHARSPND--ERWLSRARV------------------AELSYAEFLKTASPKDAIAAEMSFSDD----EIRMLALTYVQCERNRDTCLNLRLEAFERNFDRTLERALRFLRFPSQNITSMIQIASVHDVSKWSEDELRKNEHYTK-RIDRRPYYEAAREDDDIWRTITALRRAMGY 401
BLAST of NO25G00940 vs. NCBI_GenBank
Match: EXF48511.1 (sulfotransferase domain protein [Alteromonas sp. ALT199]) HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8 Identity = 86/324 (26.54%), Postives = 137/324 (42.28%), Query Frame = 0 Query: 79 HSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWL-----------YEKHPLSNYKTVMTNSSC------DPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFK-------EARRVLGY 379 HS++ ++ K+ P+ I THHKTGT L VL+E G K V + YCD++ + D EH LV N + + ++ VH++RDP ++IS Y YH +E+W + K PL Y + D KG +S+ D L+CL+ ++GL E L + + M + +++ VL++ +E+ N+D S +F+ LGF K K + DL R S E + N+H+ + K RE ++ DD + K E + LGY Sbjct: 15 HSVKRRLRQQTYKRKNFPIYIF-THHKTGTVLATNVLKEI----SDFLGLKLCRV----------------YGYCDEIP----DGYDVVIFEH--SLVSN-KILSSSFRGVHIIRDPRNVLISGYQYHR----HTEELWCNTRPLAGTLPEHIKFPLVPYSREHKSPEWKKRYLEDLKG---LSYKDNLKCLDTQKGLAFE-LDRYASWTIEDMA------NWNYELDNVLEVKMEDILKNYDEVFSNIFDHLGFTGKLREKALHIAQSHDLNRMSASEIKANKHIHSKNHSK---RENLL--DDEILKSFTEKYGETLKKLGY 291
BLAST of NO25G00940 vs. NCBI_GenBank
Match: WP_025254886.1 (hypothetical protein [Alteromonas sp. ALT199]) HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8 Identity = 86/324 (26.54%), Postives = 137/324 (42.28%), Query Frame = 0 Query: 79 HSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWL-----------YEKHPLSNYKTVMTNSSC------DPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFK-------EARRVLGY 379 HS++ ++ K+ P+ I THHKTGT L VL+E G K V + YCD++ + D EH LV N + + ++ VH++RDP ++IS Y YH +E+W + K PL Y + D KG +S+ D L+CL+ ++GL E L + + M + +++ VL++ +E+ N+D S +F+ LGF K K + DL R S E + N+H+ + K RE ++ DD + K E + LGY Sbjct: 22 HSVKRRLRQQTYKRKNFPIYIF-THHKTGTVLATNVLKEI----SDFLGLKLCRV----------------YGYCDEIP----DGYDVVIFEH--SLVSN-KILSSSFRGVHIIRDPRNVLISGYQYHR----HTEELWCNTRPLAGTLPEHIKFPLVPYSREHKSPEWKKRYLEDLKG---LSYKDNLKCLDTQKGLAFE-LDRYASWTIEDMA------NWNYELDNVLEVKMEDILKNYDEVFSNIFDHLGFTGKLREKALHIAQSHDLNRMSASEIKANKHIHSKNHSK---RENLL--DDEILKSFTEKYGETLKKLGY 298 The following BLAST results are available for this feature:
BLAST of NO25G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00940 ID=NO25G00940|Name=NO25G00940|organism=Nannochloropsis oceanica|type=gene|length=1176bpback to top protein sequence of NO25G00940.1 >NO25G00940.1-protein ID=NO25G00940.1-protein|Name=NO25G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bpback to top Synonyms
Publications
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