NO25G00940, NO25G00940 (gene) Nannochloropsis oceanica

Overview
NameNO25G00940
Unique NameNO25G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1176
Alignment locationchr25:266464..267639 -

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Properties
Property NameValue
DescriptionSulfotransferase domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:266464..267639 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO25G00940 vs. NCBI_GenBank
Match: EWM21638.1 (Sulfotransferase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 582.8 bits (1501), Expect = 8.000e-163
Identity = 281/382 (73.56%), Postives = 323/382 (84.55%), Query Frame = 0
Query:    1 MLPRTCASPGRHGGGSSRWNSNISGGNASSWW-GLSLAKWAWISACVGLLGLSLNFWADTVWVGVDRGGGSVTLSHAIRHSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFKEARRVLGYPKE 382
            MLPRT +SPGR+G   SR NS     N  +W  G+++ KW W+ AC+ LL LSL+FWA+TVWVGVD GGG++ LS AIR +LRL +KRPLVGTK++PLLIVGTHHKTGTALMALVLREAFSVHK +TGGK SGVMMG+FG  E   AP+AFYYCD LY+DTWNK+DSSS++HLPKLVDNHQFF GHYKFVHLVRDP+ELVISAYLYHH GPPDWQEVWLYE+HPLS+Y+T++ NSSCDP  R  MSW+D+LRCLNQKEGL+AEALFQT+FGA+PSMVAAV+HI GD +HA+VLQLGLEEFQ  FD TV RMFEFLGF  + V  IV GCAPFDL+RQS GEKERNEHVT GKFDK KLRE+M  Y+DPVF +ARRVLGY  E
Sbjct:   14 MLPRTYSSPGRYG---SRRNSI----NDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADE 388          
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_002499699.1 (predicted protein [Micromonas commoda] >ACO60957.1 predicted protein [Micromonas commoda])

HSP 1 Score: 78.2 bits (191), Expect = 6.400e-11
Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 0
Query:  184 GHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTN-SSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVT 349
            G Y+ VH+VRDP +++IS YLYH   P D  E WL+E  P     T     +S D  G T              + +LAE         L ++  A + +  D    R + + LE F  +FDGT+  +  FL F + +VG++V+    FD+ R SQ E   NEH T
Sbjct:  318 GEYRAVHVVRDPTQVLISGYLYHRRLPGD--ERWLFEPSPELGGGTYADRLASADKLGAT--------------DAMLAEIAMAD--DELRALALAYRDVERD---PRGMNVKLESFFEDFDGTMGAVLRFLEFEEGDVGEMVKLAGEFDVGRWSQEELAANEHFT 462          
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_003058123.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH58074.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 77.4 bits (189), Expect = 1.100e-10
Identity = 50/163 (30.67%), Postives = 84/163 (51.53%), Query Frame = 0
Query:  186 YKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVT 349
            Y+ VH+VRDPVE+++S +LYH   P D  E WL+E  P+            + +G+T   + D L   N  E ++AE         L  +  A + +  D      + + LEEF  +FD    ++F FL F ++++ ++V+    FD++R ++ E + NEH T
Sbjct:  391 YRMVHVVRDPVEVLVSGFLYHRRRPAD--EQWLFE--PVK-----------ELRGKT---YADHLTTANPAEAMMAELSMAD--DELRMLALAYRDVERD---PNAMNVKLEEFFDDFDAAAGKVFRFLRFDERDIPELVKLAGTFDMRRWTEEELKVNEHFT 530          
BLAST of NO25G00940 vs. NCBI_GenBank
Match: XP_001419928.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98221.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 74.3 bits (181), Expect = 9.200e-10
Identity = 73/294 (24.83%), Postives = 118/294 (40.14%), Query Frame = 0
Query:  100 VGTHHKTGTALMALVL-------REAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKS------DSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDD--PVFKEARRVLGY 379
            V THHKTGTALM  V           ++         +  V+    GK  +  A   F   D +    + KS       + +T  L  ++         Y+ VH+VRDP+++++S   YH   P D  E WL                        E+S+ + L+  + K+ + AE  F          + A+ ++  +      L L LE F+ NFD T+ R   FL F  + +  +++  +  D+ + S+ E  +NEH T  + D+    E     DD        RR +GY
Sbjct:  135 VATHHKTGTALMHDVFSTIANRSSPPYTFFDVRAFEDAELVVNEVTGKGLERAARRRFREADIVLDYHFGKSLPAFIEQNETTRLLQSMISVSN--AREYRIVHVVRDPLDVLVSGLAYHARSPND--ERWLSRARV------------------AELSYAEFLKTASPKDAIAAEMSFSDD----EIRMLALTYVQCERNRDTCLNLRLEAFERNFDRTLERALRFLRFPSQNITSMIQIASVHDVSKWSEDELRKNEHYTK-RIDRRPYYEAAREDDDIWRTITALRRAMGY 401          
BLAST of NO25G00940 vs. NCBI_GenBank
Match: EXF48511.1 (sulfotransferase domain protein [Alteromonas sp. ALT199])

HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8
Identity = 86/324 (26.54%), Postives = 137/324 (42.28%), Query Frame = 0
Query:   79 HSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWL-----------YEKHPLSNYKTVMTNSSC------DPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFK-------EARRVLGY 379
            HS++   ++     K+ P+ I  THHKTGT L   VL+E         G K   V                + YCD++     +  D    EH   LV N +  +  ++ VH++RDP  ++IS Y YH       +E+W            + K PL  Y     +         D KG   +S+ D L+CL+ ++GL  E L +     +  M       + +++   VL++ +E+   N+D   S +F+ LGF  K   K +      DL R S  E + N+H+ +    K   RE ++  DD + K       E  + LGY
Sbjct:   15 HSVKRRLRQQTYKRKNFPIYIF-THHKTGTVLATNVLKEI----SDFLGLKLCRV----------------YGYCDEIP----DGYDVVIFEH--SLVSN-KILSSSFRGVHIIRDPRNVLISGYQYHR----HTEELWCNTRPLAGTLPEHIKFPLVPYSREHKSPEWKKRYLEDLKG---LSYKDNLKCLDTQKGLAFE-LDRYASWTIEDMA------NWNYELDNVLEVKMEDILKNYDEVFSNIFDHLGFTGKLREKALHIAQSHDLNRMSASEIKANKHIHSKNHSK---RENLL--DDEILKSFTEKYGETLKKLGY 291          
BLAST of NO25G00940 vs. NCBI_GenBank
Match: WP_025254886.1 (hypothetical protein [Alteromonas sp. ALT199])

HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8
Identity = 86/324 (26.54%), Postives = 137/324 (42.28%), Query Frame = 0
Query:   79 HSLRLTSKRPLVGTKDRPLLIVGTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAFYYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVISAYLYHHGGPPDWQEVWL-----------YEKHPLSNYKTVMTNSSC------DPKGRTEMSWYDVLRCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQLNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAGKFDKGKLREIMVAYDDPVFK-------EARRVLGY 379
            HS++   ++     K+ P+ I  THHKTGT L   VL+E         G K   V                + YCD++     +  D    EH   LV N +  +  ++ VH++RDP  ++IS Y YH       +E+W            + K PL  Y     +         D KG   +S+ D L+CL+ ++GL  E L +     +  M       + +++   VL++ +E+   N+D   S +F+ LGF  K   K +      DL R S  E + N+H+ +    K   RE ++  DD + K       E  + LGY
Sbjct:   22 HSVKRRLRQQTYKRKNFPIYIF-THHKTGTVLATNVLKEI----SDFLGLKLCRV----------------YGYCDEIP----DGYDVVIFEH--SLVSN-KILSSSFRGVHIIRDPRNVLISGYQYHR----HTEELWCNTRPLAGTLPEHIKFPLVPYSREHKSPEWKKRYLEDLKG---LSYKDNLKCLDTQKGLAFE-LDRYASWTIEDMA------NWNYELDNVLEVKMEDILKNYDEVFSNIFDHLGFTGKLREKALHIAQSHDLNRMSASEIKANKHIHSKNHSK---RENLL--DDEILKSFTEKYGETLKKLGY 298          
The following BLAST results are available for this feature:
BLAST of NO25G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 6
Match NameE-valueIdentityDescription
EWM21638.18.000e-16373.56Sulfotransferase domain protein [Nannochloropsis g... [more]
XP_002499699.16.400e-1133.73predicted protein [Micromonas commoda] >ACO60957.1... [more]
XP_003058123.11.100e-1030.67predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_001419928.19.200e-1024.83predicted protein [Ostreococcus lucimarinus CCE990... [more]
EXF48511.11.300e-826.54sulfotransferase domain protein [Alteromonas sp. A... [more]
WP_025254886.11.300e-826.54hypothetical protein [Alteromonas sp. ALT199][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004333NSK004333Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00940.1NO25G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603196gene_8583Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g40gene8814Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00940.1NO25G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00940 ID=NO25G00940|Name=NO25G00940|organism=Nannochloropsis oceanica|type=gene|length=1176bp
ATGCTGCCTCGGACGTGCGCGTCTCCAGGCCGGCATGGTGGAGGCAGCAG
CAGATGGAACAGCAACATCAGCGGCGGCAATGCTTCGTCCTGGTGGGGCC
TCTCATTAGCAAAGTGGGCATGGATCTCTGCCTGCGTGGGACTGCTCGGT
CTCTCTCTGAACTTTTGGGCCGATACCGTGTGGGTGGGGGTGGACAGAGG
CGGGGGAAGCGTCACCCTAAGTCATGCCATTCGTCACTCCCTCCGTCTGA
CAAGCAAGCGCCCCCTTGTTGGCACTAAAGACAGACCTTTGCTCATTGTC
GGGACTCATCACAAGACTGGCACGGCACTAATGGCCTTGGTCCTCCGCGA
GGCGTTCAGCGTGCACAAGAGCTTGACAGGCGGGAAGAGTTCCGGGGTGA
TGATGGGTTTCTTTGGGAAAGCCGAAAAGGCCGGAGCGCCGTATGCGTTC
TACTACTGCGATCAACTCTATGCAGACACATGGAACAAAAGTGATTCGAG
TTCGACTGAGCATTTACCGAAACTGGTGGACAACCATCAGTTCTTCAACG
GGCATTATAAATTCGTCCATCTCGTGCGGGATCCTGTCGAGTTGGTAATT
TCGGCTTACCTGTACCACCATGGCGGCCCCCCCGACTGGCAAGAAGTATG
GTTGTACGAGAAACATCCTTTGAGCAACTACAAGACAGTGATGACGAACT
CGAGTTGCGACCCAAAAGGACGCACAGAAATGTCCTGGTATGACGTCCTC
CGGTGCTTGAACCAGAAGGAGGGGTTGCTCGCAGAAGCGTTGTTTCAGAC
GTATTTTGGGGCTCTGCCCTCTATGGTAGCAGCCGTGAAGCACATCCACG
GTGATCACCAGCATGCCCGCGTCCTACAGTTGGGGCTGGAAGAGTTTCAA
TTAAATTTTGACGGGACCGTTTCGAGAATGTTCGAATTTTTGGGTTTTGG
GAAGAAGGAGGTGGGAAAGATTGTGGAGGGTTGTGCGCCGTTCGATTTGC
AGAGGCAGAGTCAGGGAGAGAAAGAGAGAAACGAGCACGTGACAGCTGGC
AAGTTTGATAAAGGGAAATTAAGGGAGATCATGGTGGCATACGACGACCC
GGTGTTTAAGGAGGCGAGGAGGGTTCTGGGGTACCCTAAGGAGGAGAGCG
TAGTGAGGACGCGACCTGCGCACTAG
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protein sequence of NO25G00940.1

>NO25G00940.1-protein ID=NO25G00940.1-protein|Name=NO25G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MLPRTCASPGRHGGGSSRWNSNISGGNASSWWGLSLAKWAWISACVGLLG
LSLNFWADTVWVGVDRGGGSVTLSHAIRHSLRLTSKRPLVGTKDRPLLIV
GTHHKTGTALMALVLREAFSVHKSLTGGKSSGVMMGFFGKAEKAGAPYAF
YYCDQLYADTWNKSDSSSTEHLPKLVDNHQFFNGHYKFVHLVRDPVELVI
SAYLYHHGGPPDWQEVWLYEKHPLSNYKTVMTNSSCDPKGRTEMSWYDVL
RCLNQKEGLLAEALFQTYFGALPSMVAAVKHIHGDHQHARVLQLGLEEFQ
LNFDGTVSRMFEFLGFGKKEVGKIVEGCAPFDLQRQSQGEKERNEHVTAG
KFDKGKLREIMVAYDDPVFKEARRVLGYPKEESVVRTRPAH*
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Synonyms
Publications