NO25G00690, NO25G00690 (gene) Nannochloropsis oceanica

Overview
NameNO25G00690
Unique NameNO25G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2275
Alignment locationchr25:188447..190721 +

Link to JBrowse

Properties
Property NameValue
DescriptionCheckpoint protein hus1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:188447..190721 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000077DNA damage checkpoint
GO:0007049cell cycle
GO:0006950response to stress
Vocabulary: Cellular Component
TermDefinition
GO:0030896checkpoint clamp complex
GO:0005730nucleolus
Vocabulary: INTERPRO
TermDefinition
IPR007150Hus1/Mec3
Homology
BLAST of NO25G00690 vs. NCBI_GenBank
Match: EWM21573.1 (checkpoint protein hus1 [Nannochloropsis gaditana])

HSP 1 Score: 283.1 bits (723), Expect = 9.400e-73
Identity = 139/163 (85.28%), Postives = 152/163 (93.25%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPSCLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLE 164
            MKFRAGL AKDL  LNGVAQCFE+ GPSCLIYLSERSI+FASPKLGSD+VR FSEI+QEK+F +YRI SLANNSILFEIGLSNLIK+F+SAKTA FV++KLAKR GQPCICLEARALD+ELLHE+PIRVMRAADIQYY PPDV +PRVQLELPYNRSMRTVLE
Sbjct:    1 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: CBJ30733.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 234.6 bits (597), Expect = 3.800e-58
Identity = 120/279 (43.01%), Postives = 185/279 (66.31%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPSCLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGG-HAGSLTYYLPI 279
            M+F+A +V   L    GV    EKIG +C+++L+E  +  +  + GS+ V V++E+ Q+ +F +YRIES A N+ILFE   S L+++  S KT+   ++KLAKR GQPC+ +E RAL+IE++H+IP++VM A + +YY PP V  P+VQLELP  RS+RTV++R K++D+F FVD DMGG L   V+     ++TFY NL PR+ E   +    R++        S+K+D ++ LAA+  +  ++++TA+CC+I    LVLHV L   + G+LTYY+P+
Sbjct:    1 MRFKAKIVQDKLLAFAGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVDRMKAIDKFLFVDADMGGQLVFRVEKADATIKTFYSNLTPRFEE--MDANTCRKN------MSSVKVDVKK-LAAVMSMYALRFDTAICCIIGGYSLVLHVILSPINIGNLTYYVPV 270          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: XP_008863557.1 (hypothetical protein H310_01976 [Aphanomyces invadans] >ETW07464.1 hypothetical protein H310_01976 [Aphanomyces invadans])

HSP 1 Score: 171.8 bits (434), Expect = 3.100e-39
Identity = 100/289 (34.60%), Postives = 160/289 (55.36%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPS--CLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAED---EEGREDGG------TGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  V+Q  +++  S  C + L+E  + FA  K   +DV+ F  +   K+F D  IES A+N+I F +G++N  ++  S K A  + L+L KR G+  + L AR +D++++  IPI V+  A  + Y  P++P P V LE+P  R++RT+ +R K+M +F  V   M G+LRL VQ+D   +QT + NL  R    +A+D   ++G E  G        F + S+++D R   + +  + G    T LCCL++   LV+H  L    GS T Y+P+
Sbjct:    1 MRFRGHLTAASFPILMEVSQFMQRVSSSDMCFVVLNEERMSFAM-KTSGEDVQTFVHLNIAKVFGDVVIESRADNNIAFALGIANFSRALQSGKEASGIMLRLLKRDGRSFLSLRARTVDLDIIQNIPIEVVSMATAESYREPNIPPPTVALEMPPLRALRTITDRLKAMQKFLLVQAGMDGTLRLRVQSDTIVLQTLHTNL--RCRPDLADDPTSKDGEEADGYNVDETNNFAASSVRVDARH-ASKMLSVDGNAVLTVLCCLVDQQALVVHAVLVDGFGSFTCYVPV 285          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: XP_009825857.1 (hypothetical protein H257_03452 [Aphanomyces astaci] >ETV84165.1 hypothetical protein H257_03452 [Aphanomyces astaci])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 95/286 (33.22%), Postives = 155/286 (54.20%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPS--CLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGN------LIPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  V+Q   ++  S  C + L+E  + FA  K   +D++ F  +   K+F D  +ES A+N+I F +G++N  ++  S K A  V L+L KR G+  + L AR +D++++  IPI V+  A  + Y  P++P P V LE+P  R+ RT+ +R K+M ++  +   M G+LRL VQ+D   +QT + N      L+ R S     D+E  +D      + S+++D R   + +  + G    + LCCLI+   LV+H  L    GS T Y+P+
Sbjct:    1 MRFRGQLTAASFPILMEVSQFMHRVSSSDTCFVMLNEERMSFAM-KTSGEDMQTFVHLSVAKLFADVVVESRADNNIAFALGIANFSRALQSGKDASGVMLRLLKRDGRSFLSLRARTVDLDIIQNIPIEVVSMATAENYREPNIPPPTVALEMPPLRAFRTITDRLKTMQKYLLIQAGMDGTLRLRVQSDTFVLQTLHTNLRCRPDLVERPSSDDIVDDEASDDNA----ASSVRVDARH-ASKMLSVDGNAVLSVLCCLIDQQALVIHAILVDQFGSFTCYVPV 280          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: OQR97168.1 (hypothetical protein THRCLA_07077 [Thraustotheca clavata])

HSP 1 Score: 162.2 bits (409), Expect = 2.400e-36
Identity = 90/280 (32.14%), Postives = 150/280 (53.57%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKI--GPSCLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  V+Q   +I    SC + ++   I F   K   +D++ F  +   K+F D  +ES ++N+I F + + N  ++  S K A  + L+L KR G+  + + AR +DI+++  IPI V+  A ++ +  P +P P V LE+P  +S+RTV +R K+M +F  ++ +M GS+RL V++D   +QT +    PR+    A+ E+   +      + ++ +D R   A +  + G    T LCCLI+   LVLH  L    GS T Y P+
Sbjct:    1 MRFRGNLTAPAFPILMEVSQYMNRITNADSCFVMVTPERISFIL-KTSGEDIQTFVHLAMAKLFTDVVLESRSDNNIAFTLSIENFTRALQSGKEASGILLRLLKRDGRSFLSMRARTVDIDIIQNIPIEVLSVASVENHKEPAIPSPNVALEIPSLKSLRTVTDRLKAMQKFLTIEANMDGSIRLRVKSDTFALQTQHVGFKPRFDLIQADGEDENTENEPALKTSTVCVDGRH-FAKMLSVDGNAVVTILCCLIDNRALVLHTILCEGFGSFTCYSPV 278          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: XP_012196844.1 (hypothetical protein SPRG_02867 [Saprolegnia parasitica CBS 223.65] >KDO32390.1 hypothetical protein SPRG_02867 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 157.9 bits (398), Expect = 4.600e-35
Identity = 94/281 (33.45%), Postives = 151/281 (53.74%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPS--CLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYS-EGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  ++Q   ++  S  C + ++   + F   K G +DV+ F  +   K+F D  +ES + N I F + ++N  ++  S K A  + L+L KR G+  + L AR +DI+++  IPI V+  A  + Y  P VP P V +E+P  RS+RTV +R K+M ++  ++  M GSLRL VQ+D   +QT + +  PR+     A D++  ED  +     ++++D R   + +  + G    T LCCLI+   LVLH  L    GS T Y P+
Sbjct:    1 MRFRGNLTAASFPVLMEISQYMARLSSSDACFVVVTPERMSFVM-KTGGEDVQTFVHLTMAKLFEDVVLESRSENQIAFTLSIANFSRALQSGKEASGILLRLLKRDGRSFLALRARTVDIDIIQNIPIDVVSMASAENYKEPRVPSPTVAVEIPTLRSLRTVTDRLKAMHKYLTIEAKMDGSLRLRVQSDTFALQTQHVSFKPRFDLVEEASDDDAHEDIASRV--STVRVDGRH-FSKMLSVDGNAVVTILCCLIDNRALVLHSILCEGFGSFTCYSPV 277          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: OQS01154.1 (hypothetical protein ACHHYP_01723 [Achlya hypogyna])

HSP 1 Score: 157.5 bits (397), Expect = 6.000e-35
Identity = 93/284 (32.75%), Postives = 150/284 (52.82%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKI--GPSCLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAEDEEGREDGGT----GFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  V+    ++     C + ++   + F   K G +D++ F  +   K+F D  +ES + N I F + ++N  K+  S K A  + L+L KR G+  + L AR +D++++  IPI V+  A  + Y  P VP P V +E+P  RS+RTV +R K+M ++  ++  M GSLRL VQ+D   ++T + N  PR+   + +D E   DG +       + ++++D R   A +  + G    T LCCLI+   LVLH  L    GS T Y P+
Sbjct:    1 MRFRGNLFAASFPILMEVSTYMARVANADGCFVVITPERMSFVM-KTGGEDIQTFVHLAMAKLFVDVVLESRSENQIAFTLSIANFSKALQSGKEASGILLRLLKRDGRSFLSLRARTVDVDIVQNIPIEVVSMASAENYKEPRVPSPTVAVEIPALRSLRTVTDRLKAMQKYLTIEAKMDGSLRLRVQSDTFALETQHVNFKPRFD--LVQDAEVDGDGSSTEVATDRASTVRVDGRH-FAKMLSVDGNAVTTVLCCLIDNRALVLHSILCEGFGSFTCYSPV 280          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: XP_008617437.1 (hypothetical protein SDRG_13133 [Saprolegnia diclina VS20] >EQC29102.1 hypothetical protein SDRG_13133 [Saprolegnia diclina VS20])

HSP 1 Score: 156.4 bits (394), Expect = 1.300e-34
Identity = 94/282 (33.33%), Postives = 149/282 (52.84%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPS--CLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYS--EGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETALCCLIEASCLVLHVALGGHAGSLTYYLPI 279
            M+FR  L A    +L  ++Q   ++  S  C + ++   + F   K G +DV+ F  +   K+F D  +ES + N I F + ++N  ++  S K A  + L+L KR G+  + L AR +DI+++  IPI V+  A    Y  P VP P V +E+P  RS+RTV +R K+M ++  ++  M GSLRL VQ+D   +QT +    PR+   E   +D++   D      S ++++D R   + +  + G    T LCCLI+   LVLH  L    GS T Y P+
Sbjct:    1 MRFRGNLTAASFPVLMEISQYMARLSSSDACFVVVTPERMSFVM-KTGGEDVQTFVHLNMAKLFEDVVLESRSENQIAFTLSIANFSRALQSGKEASGILLRLLKRDGRSFLALRARTVDIDIVQNIPIDVVSMASADNYKEPRVPSPTVAVEIPTLRSLRTVTDRLKAMHKYLTIEAKMDGSLRLRVQSDTFALQTQHVGFKPRFDLVEEAPDDDDAHGDDIASRVS-TVRVDGRH-FSKMLSVDGNAVVTILCCLIDNRALVLHSILCEGFGSFTCYSPV 279          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: OEU20985.1 (hypothetical protein FRACYDRAFT_234617 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 150.6 bits (379), Expect = 7.300e-33
Identity = 100/338 (29.59%), Postives = 166/338 (49.11%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGVAQCFEKIGPS----CLIYLSERSIKFASPKLGSDDVRVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSA---------------------------------KTAQFVKLKLAKRGGQPCICLEARAL-------DIELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAEDEEGREDGGTGFP----SCSIKLDTRRLLAALYF--------LGGIKYETALCCLIEASCLVLHVALG-GHAGSLTYYLPIYLV 282
            M+F+A ++   L+LL+ +     K+  +     ++YL E  ++  S K     +  F+E+ Q+++F ++RIES A+N I+ ++ L +L  +  S                                         LKLAKR   PC+CLE R         D+E+   IP+ ++R A++Q + PP + +P+VQLELP +R +R V++R KSM +  F++G+M G L + + +D   +  FY +LIPR+ E   ED+E  E G T  P    SC +K+D  +L   L +           +   + L  +++   LVLHV L     G  TYYLP++ +
Sbjct:    1 MRFKAKMMNDQLALLHAIISPISKLQDANRHFAVLYLDEEYVRI-SCKTSESGITCFAELSQKELFVEHRIESAADNVIVCQVDLVSLKMALQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKLAKRNRLPCLCLEGRHAQSDLANHDVEIHQAIPVTILRKAEMQNHLPPQINIPQVQLELPKDRQIRPVIDRLKSMGKHVFLEGNMKGDLTIRLDHDGASMACFYNHLIPRWQE--EEDDENGERGTTPMPNANASCIVKVDAHKLSTCLQWQQQTAQQQQWQLPVTSCLLGMVQNEMLVLHVLLSPEQVGFFTYYLPVHFL 335          
BLAST of NO25G00690 vs. NCBI_GenBank
Match: EJK60218.1 (hypothetical protein THAOC_19473 [Thalassiosira oceanica])

HSP 1 Score: 146.0 bits (367), Expect = 1.800e-31
Identity = 104/350 (29.71%), Postives = 165/350 (47.14%), Query Frame = 0
Query:    1 MKFRAGLVAKDLSLLNGV-------------AQCFEKIGPSCLIYLSERSIKFAS--------------PKLGSDDVRVFSE-IEQEKIFRDYRIESLANNSILFEIGL-----------------------------------SNLIKSFTSAKTAQFVKLKLAKRGGQPCICLEARALD--IELLHEIPIRVMRAADIQYYAPPDVPVPRVQLELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNLIPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETA---LCCLIEASCLVLHVALGGH-AGSLTYYLPIYLV 282
            M+F++ L  + L LL+ V                   +G    +YL    ++ +S               + G + +  FSE I    IF +++IESLA N I+FEI L                                   S  + S   + ++  V +KLAKRGG PC+CL+  + D   ++ H +P+R++RA + Q++ PP V  P VQLE   +R +R V+ER KS+    +V+G M G L L + +D   ++TFY  LIPR  E  ++ E           SC++K+D+++LLAAL +   +   T    + CLIE   +V+HV L     G  TYY+P++ +
Sbjct:    1 MRFKSKLAVEHLQLLHNVIVPISRLTGGGQLGNTNSSVGSGTTLYLDPEHLRISSRGGAGKSVENAMNGGEGGGEGIVCFSELIALNGIFLEHKIESLAQNVIVFEIDLVQMRTALAATLQSLGGSGAADKQVPLYNSGDGGRSSRRMSSSFQSGSSVIVVMKLAKRGGVPCLCLDTTSHDGNFDVHHAVPVRILRAEEWQHHLPPLVSTPDVQLEFQLDRPLRPVIERMKSISPCIYVEGSMQGQLVLRLDSDAVSIRTFYDKLIPRTDEESSQAEPA---------SCTLKIDSKKLLAALQWQSSMARGTVSSYIICLIENEMMVVHVCLAPEDVGFFTYYVPVHFL 341          
The following BLAST results are available for this feature:
BLAST of NO25G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21573.19.400e-7385.28checkpoint protein hus1 [Nannochloropsis gaditana][more]
CBJ30733.13.800e-5843.01conserved unknown protein [Ectocarpus siliculosus][more]
XP_008863557.13.100e-3934.60hypothetical protein H310_01976 [Aphanomyces invad... [more]
XP_009825857.11.300e-3733.22hypothetical protein H257_03452 [Aphanomyces astac... [more]
OQR97168.12.400e-3632.14hypothetical protein THRCLA_07077 [Thraustotheca c... [more]
XP_012196844.14.600e-3533.45hypothetical protein SPRG_02867 [Saprolegnia paras... [more]
OQS01154.16.000e-3532.75hypothetical protein ACHHYP_01723 [Achlya hypogyna... [more]
XP_008617437.11.300e-3433.33hypothetical protein SDRG_13133 [Saprolegnia dicli... [more]
OEU20985.17.300e-3329.59hypothetical protein FRACYDRAFT_234617 [Fragilario... [more]
EJK60218.11.800e-3129.71hypothetical protein THAOC_19473 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004363NSK004363Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00690.1NO25G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G00690.2NO25G00690.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603079gene_8554Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100012g69gene8841Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00690.1NO25G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G00690.2NO25G00690.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00690 ID=NO25G00690|Name=NO25G00690|organism=Nannochloropsis oceanica|type=gene|length=2275bp
CCTGCTTGTGCCAATATTTTGTCTTTGTGTAGAGGATGTGCAGTGGAGGT
GATTTAGTCGACATGAGTTGTGTGAGTTGTTGCAATCGCTGAGACTGCCT
CCCCGCACCTCTGCGGCATCCCCGCGGTAGCAGAGGAGTCGTTCTTCGTT
TTTCGTTACTACCTTCTTAATCCCCATCCAACCTCCCTTCTTACCTCGCG
CTTGAGCACAGTCACAGCAATACCTGCGCCAGTGTACCATCGGCAAGTCA
TGAAGTTCCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGgt
aattcttcctcccttcctgcctccatccctcactcccttcctcactctcc
ctcccctttcccccacaacacgacacaagGCGTGGCACAATGCTTCGAAA
AAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGCTCGATCAAGTTC
GCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTTCAGTGAGATTGA
GCAGgtgaggcgaggcgggggggtaagagagggaagggtgtgaatgatga
ggggagttgtgatgggaagagaagcaagagtggcgtacaaaaagagtaag
ctgcaacgctattgcattggtctcggtgctatgtgcatgtacgtagcatc
aaatgtgcctatttgccctccctccccctccccctcccctcccttccttt
gtcacttcccccctccctccctccctccgtttcaaacagGAGAAAATCTT
CAGGGACTACCGCATCGAGAGCCTGGCTAACAACTCCATCCTCTTCGAGA
TCGGCCTGTCCAACCTTATCAAGTCCTTCACCTCTGCCAAAACCGCGCAG
TTTGTGAAGCTGAAGCTGGCAAAAAGGGGCGGACAGCCGTGCATATGCCT
AGAAGCCAGGgtaggttggtctgatttctccctgcctgcctccctccctc
ttcccgttcctcccagtatcctttgctcctatgaaacgcgctaacggcca
agaccaaagccgacgaggaagtgattgaacgccagcccctgactcacctc
gcatctgcctggaatcacgagtctgattgagggagggggagggcagaaaa
gctgctttcgatgcgatttttttttcacaaccttcttccctccctccccc
cctccctctctcctccccccctccagGCGCTGGACATTGAGCTCCTCCAC
GAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAGTACTACGCGCC
TCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCCCTACAACCGCT
CCATGCGCACAGTGCTCGAGgtgagggaatgaaggaggctaggggggagg
aagggaggggggaagggggtaaggaaagtgtgggaaggcaacgaaggacg
ggcacccacttattcgcctcccctcccccttcctctctctctcactcttt
ctctccatcccttcccccttcacgtcagCGGTTCAAGAGCATGGACCGCT
TTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTGCAG
AATGACAGGTGTCATGTGCAGACGTTTTATGGgtaacaaaggcaacgccc
gcccgccccactccctcgctccctccatctcttttccttttcgtttgcaa
atgttacgccaataatcataaaacggggaggaatggagggagaagggaag
aagggagggaggaagggagcgaaggaagagtgctccggttgcgggtgtag
aaagatgttatcggaggtggagggtatagtggtttccttactcaccttct
ctacctccccacctcccccctccttctgttcctcaccagCAACTTGATAC
CGCGCTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGA
GGGACAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCT
GGCGGCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCT
GTCTGATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACAT
GCGGGCTCTTTGACATACTACCTGCCTATCTATCTTGTGTAGGAGTAGGA
GGCGGAGGTGGAAGAGGAAGAGGAGGAGGGGGAGAAGAAGACAAAAAAGG
AGGAGAAGGAGGAGATGGATGGTGACTTGTGTCAGTTAGAGTGTTTGTAC
ATAACATAGAAAAACATATAATATGGAAAAGGAATTGCGTACTTCTTTTC
TGTCGTAGGTATCCTACAATCCTAG
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protein sequence of NO25G00690.1

>NO25G00690.1-protein ID=NO25G00690.1-protein|Name=NO25G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MKFRAGLVAKDLSLLNGVAQCFEKIGPSCLIYLSERSIKFASPKLGSDDV
RVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLK
LAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQL
ELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNL
IPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETAL
CCLIEASCLVLHVALGGHAGSLTYYLPIYLV*
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protein sequence of NO25G00690.2

>NO25G00690.2-protein ID=NO25G00690.2-protein|Name=NO25G00690.2|organism=Nannochloropsis oceanica|type=polypeptide|length=199bp
MKFRAGLVAKDLSLLNGVAQCFEKIGPSCLIYLSERSIKFASPKLGSDDV
RVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLK
LAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQL
ELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYG*
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Synonyms
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