NO25G00590, NO25G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00590 vs. NCBI_GenBank
Match: EWM21576.1 (brca1-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 226.5 bits (576), Expect = 3.000e-55 Identity = 234/784 (29.85%), Postives = 318/784 (40.56%), Query Frame = 0 Query: 49 LPPIPGYEWVQVRETWGRLHLYRHAPRTYAMLQHPHHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGLHTPFYPARLSTVLLLGCGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVLELLEGLAMIAPRIAFVHIIR-ERHRGGTSTHALVTLDSVEAAQGWVALLGDDQTNRDLVMGGQLVYASGVVMVNEPRSDALLCCLKSLVDD-AGPADAAAATGARFGGESGYPSLDELSQLGTVQVQGPGGGSVSSARCLALGPPADALALLSSLVLFVGKVEEGKEE--KRAYVMENEGGGGVESNEVGSMDNSNSXXXXXXXSSRSAIEEEGEGGWEVDGSMALFSQGLDSYLAELPTCLQCLNRLDPVAVGVALGIPPLPGTAAXXXXXXXXXXXXXXXASFLDDRHSSNNVTVKSYICSGVASSSCATCQKVQIYA------NLKQKRKRTL--RGFEXXXXXXXXXXXXXXXXMSRRKGVADDCG-----------------CDG-------GTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXME------KGPQGKLDGLGAEYSALLMSQLEEQKHYYERLLAKTAAELAHSVCQ-DEMPEGVRREADQVRGQIARLEEEHLKLMEALREEEEMARQMRGRNQGLLQEQKQHVSHLASLRKAISKAKTALDTEVADLEAQINDLSFFLRTKTAVQESELEGGGVMI 790 L +PGYE VQ+ ET GRL LYRHAPR + H L + PF PARL TVLLL C + +S ++L+ L +APRI F+ I+R E HR HAL+T+DS+ A +A L + D ++ GQ+++ S +V+VN+ +S+ LL L ++ D G T +S ++ LS L TVQ++GP + L G DALAL SL+L V E+ R M+ E GG ++S + ++SN EG+ E D ++ LFS+GL YLAELPTC CL+RLDPV+VG LG A S + S +SS C C KVQI+A N ++ +K F + + CG C G TG E KG +GK DGL AEYSALL+SQLEEQ Y+ERLL K A + A ++CQ DE+ + RREA ++R I ++EE+H ME LR EE AR+MR RNQ LL +QK+ HL++LR I+ AK ++ +LEAQI+DL FFLR+K AVQ SELEGG +++ Sbjct: 103 LAHLPGYESVQIYETLGRLRLYRHAPRNFF-----HRSLATGTRTDGDKVKDAYGDSYFGRQSGHRQASDKGGRAAKSGRDNERSYKAERLEGGSGDAAHEDEWHFLPFRPARLFTVLLLDCQNT----DCASGFNYANAKEQHDGTQLPDIHLESGHLPEQSCHAVHAVSARQILQSLTEMAPRIRFIQIVRDEVHR---RVHALITVDSILAVDRLIAFLREP----DALLQGQILFVSSIVLVNDQKSEELLSSLDLVIKDVTGSRTCVQETSFMQSKKSDPLNIAHLSHLDTVQLRGPHEKDICPVYSLVFGDYLDALALSQSLILSVRDAGFISEDLFGRNLQMQPE-GGEMQSISLNIKNDSNI---------------EGDEEDEYD-NIDLFSRGLLCYLAELPTCHGCLSRLDPVSVGTYLG-------PARSDDKFSSIQECDTGVEISGKISGSQEYSAGKRSPSRKSSSMCRICNKVQIHAMNQEKCNFQRSKKEGTPDTAFNGSKMVTPVSLTCYTCNIPENLWICLLCGHVGCGRYTAEHAKRHFHCCGHIFSLELATGRVWDYVEDMFVHSSEFEPGGGLSPTSALSESHAIADRIHGYREDNLHEVSCRKVKGARGKFDGLEAEYSALLLSQLEEQNAYHERLLTKAATDFAQNICQDDELSDDERREAFKIRSDIQKMEEDHSCFMEELRRAEESARKMRVRNQELLCDQKEGKFHLSNLRSNITSAKIRQKHDIQELEAQISDLLFFLRSKEAVQSSELEGGDLIV 846
BLAST of NO25G00590 vs. NCBI_GenBank
Match: CBN75599.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9 bits (167), Expect = 8.000e-8 Identity = 43/142 (30.28%), Postives = 82/142 (57.75%), Query Frame = 0 Query: 639 KLDGLGAEYSALLMSQLEEQKHYYERLLAKTAA--ELAHSVCQDEMPEGVRREADQVRGQIARLEEEHLKLMEALREEEEMARQMRGRNQGLLQEQKQHVSHLASLRKAISKAKTALDTEVADLEAQINDLSFFLRTKTAVQ 779 K+ + EY AL+ QL+EQ+ Y+E L+A A A++ ++ + + R E ++R I L ++ ++++LR +EE AR++R N+GL+ EQ+ L + + + + ++++LE Q+ DL FFL+T+ V+ Sbjct: 807 KMAVVSREYEALVARQLQEQQRYFEDLIATAVAVDAEANAPVEEVLTDEERAEVGKLRQAIDELSGKYEGILDSLRTDEETARRVRSENRGLVSEQRSQKREEGRLAEEARQTRRQCEQQMSELEGQMQDLLFFLKTQEKVK 948
BLAST of NO25G00590 vs. NCBI_GenBank
Match: CCA16524.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 65.9 bits (159), Expect = 6.800e-7 Identity = 50/153 (32.68%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 639 KLDGLGAEYSALLMSQLEEQKHYYERLLAKTAAELAHSVCQDEMPEGVR--READQVRGQIARLEEEHLKLMEALREEEEMARQMRGRNQGLLQEQKQHVSHLASLRKAISKAKTALDTEVADLEAQINDLSFFLRTKTAVQES----ELEGG 786 KL+ L EY+ LL SQLEEQ+ YYERLLA A+E +++ + + V+ R+++++ Q + EE L + L N+ L++ Q Q + + L + + +ADLEAQ+ DL F+L T++ V+ S E++GG Sbjct: 362 KLEKLAVEYNWLLKSQLEEQRLYYERLLA-NASECNNTLATTTLEQEVKHLRKSNEILQQKSSKSEEELDFVREL-------------NKSLIENQHQWKARIRELEEQKRNTEKENSLRIADLEAQVRDLMFYLDTQSKVERSAYKNEIQGG 500
BLAST of NO25G00590 vs. NCBI_GenBank
Match: XP_024571968.1 (conserved hypothetical protein [Plasmopara halstedii] >CEG35599.1 conserved hypothetical protein [Plasmopara halstedii]) HSP 1 Score: 65.9 bits (159), Expect = 6.800e-7 Identity = 54/167 (32.34%), Postives = 88/167 (52.69%), Query Frame = 0 Query: 633 EKGPQGKLDGLGAEYSALLMSQLEEQKHYYERLLAKTAAELAHSVCQDEMPEGVRRE-ADQVRGQIARLEEEHLKLMEALREEEEMARQMRGRNQGLLQEQKQHVSHLASLRKAISKAKTALDTEVADLEAQINDLSFFLRTKTAVQES----ELEGGGVMIGHTVT 795 E+ KL+ L EY+ LL SQLEEQ+ YYERLLA+ + EG R+ + + +L++ +L L E ++ EE +R N+ L++ QKQ + +L A ++ + V DLE+Q+ DL F+L T+ V++S +++GG + I T Sbjct: 323 EEDEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLAR-------------VEEGKSRQLLNAHEHERKQLKKTNLVLEEKTKKLEEELTFVRELNKSLIENQKQWKERVRALEDANARIERDTALRVGDLESQVRDLMFYLDTQNKVEQSVHCEDIKGGTIEIESEAT 476 The following BLAST results are available for this feature:
BLAST of NO25G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00590 ID=NO25G00590|Name=NO25G00590|organism=Nannochloropsis oceanica|type=gene|length=2645bpback to top protein sequence of NO25G00590.1 >NO25G00590.1-protein ID=NO25G00590.1-protein|Name=NO25G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=813bpback to top Synonyms
Publications
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