NO25G00500, NO25G00500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00500 vs. NCBI_GenBank
Match: EWM21610.1 (copper homeostasis protein cutc [Nannochloropsis gaditana]) HSP 1 Score: 258.8 bits (660), Expect = 2.000e-65 Identity = 155/280 (55.36%), Postives = 191/280 (68.21%), Query Frame = 0 Query: 14 RPRVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGRE--GVKDTDGAKIENLAKIVHAL 292 R +LEVCVDS +G++ AL ADRIELCS L+ GGLTPS GLME A +L A +H PP V+AMIRPR+GDFSYSA++L M RDI+ ARR+GLAGVVFG T A DL + A+ L A+ + S+TLHRAIDL+PDP A L ++++ LPP S+DRVLTSGGA SAW+GR IARMV+A G+ V +MAGAGV ++NVS+LV TGV +VHASC S+ D R V K+ AFGF G + GV TD AKIE LA +VH L Sbjct: 7 RHHKILEVCVDSPEGLSIALPR-ADRIELCSDLDAGGLTPSYGLMEMAMAL-AKRH--ESPPPVLAMIRPRAGDFSYSALELETMARDIKVARRLGLAGVVFGVTDAERGDLAVQAMLFLTEAAKGDGEGGAPALSVTLHRAIDLTPDPPACLLALIQALPPRSLDRVLTSGGALSAWEGRRNIARMVEAVAGTDVHIMAGAGVCLSNVSQLVATTGVREVHASCRSVGDI------RGSGRGAVAEKVRAFGFSGGQGGGVVGTDAAKIETLALLVHDL 276
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_092499400.1 (copper homeostasis protein CutC [bacterium A52C2] >SER45693.1 copper homeostasis protein [bacterium A52C2]) HSP 1 Score: 187.6 bits (475), Expect = 5.600e-44 Identity = 113/231 (48.92%), Postives = 146/231 (63.20%), Query Frame = 0 Query: 11 AEKRPRVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSI 242 A R RV+LE+CVD+ G+ A+ GADRIELCSALE+GGLTPS GLM A +L S H AMIRPRSG F + DLA M RD++ AR GLAGVV G+ + SD LD + LVA H+ S+TLHRA DL PDP+A+LR+ + DR+LTSGGA +A +G +A +V+AA G + V+AG+G+S NV+EL+ T V +VHASC + Sbjct: 3 ASSRGRVVLEICVDTATGLDAAVEGGADRIELCSALEIGGLTPSAGLMAIAGALPCSVH---------AMIRPRSGGFVFDEGDLATMLRDVDAARAAGLAGVVLGA-SRSDASLDAEMLARLVA--------HAEGLSVTLHRAFDLVPDPLAALRTAIDL----GFDRILTSGGALTAQEGGAVLAELVEAA-GGRIAVLAGSGISAGNVAELLDRTAVREVHASCRMV 210
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_089926693.1 (copper homeostasis protein CutC [Caulobacter sp. UNC279MFTsu5.1] >SFJ50673.1 copper homeostasis protein [Caulobacter sp. UNC279MFTsu5.1]) HSP 1 Score: 183.3 bits (464), Expect = 1.100e-42 Identity = 120/276 (43.48%), Postives = 163/276 (59.06%), Query Frame = 0 Query: 16 RVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGREGVKDTDGAKIENLAKIVHAL 292 RV+LEVCVD+ G+A A+ GADRIELCSAL + GLTP+ GLM AA P + MIRPR+GDF Y A DL M RDI+ R GLAGVV G+ + DLD+ A+ LVA H+ +TLHRA DL+PDP A+L + + +R+LTSG A +A G +TIA +V+ A G + ++AG GV+ +NV+ELV TGV +VH SCS M G +E + GF+ ++G++DTD A + +AK++ L Sbjct: 4 RVILEVCVDTPAGLAAAIAGGADRIELCSALALQGLTPTPGLMALAA---------EAPIPIYPMIRPRNGDFVYDAGDLDAMFRDIDAVRAAGLAGVVIGANRPAG-DLDVEALAMLVA--------HAEDLGVTLHRAFDLTPDPFAALETAIDL----GFERILTSGQALNAMAGAETIAVLVERAAGR-IAILAGGGVNPSNVAELVARTGVREVHGSCS------GPMAYGLGQGHE--DRAYKLGFV-QDGLRDTDQAVVAQVAKVLRGL 247
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_028038834.1 (copper homeostasis protein CutC [Caulobacter sp. URHA0033]) HSP 1 Score: 180.3 bits (456), Expect = 8.900e-42 Identity = 116/276 (42.03%), Postives = 163/276 (59.06%), Query Frame = 0 Query: 16 RVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGREGVKDTDGAKIENLAKIVHAL 292 RV+LEVCVD+ G+A A+ GADRIELCSAL + GLTP+ GLM AA P + MIRPR+GDF Y A DL + RDI+ R GLAGVV G+ + +LD+ A+ LVA H+ +TLHRA DL+PDP+A+L + + +R+LTSG A +A G +TIA +V+ A G + ++AG GV+ +NV+ELV TGV +VH SCS M +G +E + GF+ ++G++DTD + + K++ L Sbjct: 4 RVILEVCVDTPAGLAAAIEGGADRIELCSALALQGLTPAPGLMALAA---------EAPIPIYPMIRPRNGDFVYDAGDLDAIFRDIDAVREAGLAGVVIGANRPAG-ELDVDALSMLVA--------HAEGLGVTLHRAFDLTPDPMAALETAIDL----GFERILTSGRALNAMAGAETIAALVERAAGR-IAILAGGGVNSSNVAELVARTGVREVHGSCS------GPMAYGQGQGHE--DRAYKLGFV-QDGLRDTDRETVAAVVKVLRGL 247
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_007675717.1 (copper homeostasis protein CutC [Caulobacter sp. AP07] >EJL22007.1 hypothetical protein involved in copper resistance [Caulobacter sp. AP07]) HSP 1 Score: 177.6 bits (449), Expect = 5.800e-41 Identity = 118/276 (42.75%), Postives = 161/276 (58.33%), Query Frame = 0 Query: 16 RVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGREGVKDTDGAKIENLAKIVHAL 292 RV+LEVCVD+ G+A A+ GADRIELCSAL + GLTP+ GLM AA P + MIRPR GDF Y A DL + RDI+ AR GLAGVV G+ S +LD A+ LVA H+ +TLHRA DL+PDP A+L + + +R+LTSG A +A G +TIAR+V+ A G + ++AG GV +NV+EL+ TGV +VH SCS M G +E + GF+ ++G++DTD + + +++ AL Sbjct: 4 RVILEVCVDTPAGLAAAIEGGADRIELCSALALQGLTPAPGLMAIAA---------EAPIPIYPMIRPRHGDFVYDAGDLDAIFRDIDAARAAGLAGVVIGANLPSG-ELDAEALAMLVA--------HAEGLGVTLHRAFDLTPDPSAALETAIDL----GFERILTSGCALNAMAGAETIARLVEQADGR-IAILAGGGVKPSNVAELIARTGVVEVHGSCS------GPMTYGLGQGHE--DRAYRLGFV-QDGLRDTDLETVAAMVEVLSAL 247
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_037060656.1 (copper homeostasis protein CutC [Rhizobium leguminosarum]) HSP 1 Score: 176.8 bits (447), Expect = 9.800e-41 Identity = 120/274 (43.80%), Postives = 157/274 (57.30%), Query Frame = 0 Query: 17 VLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGREGVKDTDGAKIENLAKIVHA 291 ++LEVCVDS +G+A A+ GADRIELCSALEVGGLTP GLM+ AA+ P V AMIRP +G F + A D A M DI+ AR GLAGVV G+ A T LDL + L A H+ TLHRA DL PDP +L+ + EL +R+LTSG A DG +T+AR+ K A G + +M G+GV +NVSE+++ATG ++VH SCSS V S+ + VAFGF + TD A + + + + A Sbjct: 3 IILEVCVDSPRGLAAAVEGGADRIELCSALEVGGLTPVAGLMKAAAA---------APIRVYAMIRPHAGPFVFDAADEAAMMADIDAARAFGLAGVVIGANRADGT-LDLPLLHRLKA--------HAAGMGSTLHRAFDLVPDPDVALQQAI-EL---GCERILTSGCVPKAIDGLETLARLSKTAAGQ-ISIMPGSGVRPSNVSEILRATGASEVHGSCSSPVASVDL-------------RAVAFGFEAASANR-TDAAVVRLMRQTIDA 239
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_084726777.1 (copper homeostasis protein CutC [Sinorhizobium sp. PC2]) HSP 1 Score: 174.5 bits (441), Expect = 4.900e-40 Identity = 112/225 (49.78%), Postives = 141/225 (62.67%), Query Frame = 0 Query: 17 VLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPP--EVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCS 240 +LLEVCVD QG+A A+ GADRIELCSAL VGGLTPS GLM A GPP V AMIRPR GDF Y A DL VM+RDI+ AR GLAGVV G++ A D LD + L H+ +TLHRA DL PD V ++ + EL +R+LTSGGAR+A + DT+AR+V+ A G V +M G+GVS++++ L+ VT+VH+SCS Sbjct: 4 ILLEVCVDDAQGLAAAMEGGADRIELCSALAVGGLTPSPGLMALA-----------GPPPVPVYAMIRPRPGDFVYGAADLEVMRRDIDAARNAGLAGVVLGASLA-DGRLDARMLTKLA--------GHAAGMGLTLHRAFDLVPDFVEAI-EITVEL---GFERILTSGGARTAPEAVDTLARLVELAAGR-VSIMPGSGVSLSSIDALLPRLAVTEVHSSCS 203
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_056726067.1 (copper homeostasis protein CutC [Caulobacter sp. Root655] >KRA56373.1 copper homeostasis protein CutC [Caulobacter sp. Root655]) HSP 1 Score: 173.7 bits (439), Expect = 8.300e-40 Identity = 115/276 (41.67%), Postives = 160/276 (57.97%), Query Frame = 0 Query: 16 RVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGKMVAFGFIGREGVKDTDGAKIENLAKIVHAL 292 RV+LEVCVD+ G+A A+ GADRIELCSAL + GLTP+ GL+ AA + MIRPR+GDF Y DL + RDI+ R GLAGVV G+ S +LD+ A+ LVA H+ +TLHRA DL+PDP A+L + + +R+LTSG A +A G +TIAR+V+ A G + ++AG GV +NV+EL+ TGV +VH SCS M G +E + GF+ ++G++DTD A + + K++ L Sbjct: 4 RVILEVCVDTPAGLAAAIEGGADRIELCSALALQGLTPAPGLIAQAAEAAI---------PIYPMIRPRNGDFVYDDGDLDAIFRDIDAVRAAGLAGVVIGANRPSG-ELDVDALAMLVA--------HAEGLGVTLHRAFDLTPDPFAALETAIDL----GFERILTSGCALNAMAGAETIARLVEQADGR-IAILAGGGVKPSNVAELIARTGVVEVHGSCS------GPMTYGLGQGHE--DRAYRLGFV-QDGLRDTDEATVAAMVKVLAGL 247
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_088871967.1 (copper homeostasis protein CutC [Nitrospirillum amazonense] >ASG21245.1 copper homeostasis protein CutC [Nitrospirillum amazonense CBAmc]) HSP 1 Score: 173.7 bits (439), Expect = 8.300e-40 Identity = 123/274 (44.89%), Postives = 162/274 (59.12%), Query Frame = 0 Query: 16 RVLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPPEVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCSSIVDSISSMEEREGATNEVVGK-MVAFGFIGREGVKDTDGAKIENLAKIV 289 RV LEVCVDS GVA A++ GADR+ELC+AL VGGLTPS GLM AA+ G P AMIRPR GDF Y DL VM DI+ R +GL GVV G++ S +LD A+ LV + +TLHRAIDL+PDP+ +L + EL +RVLTSG AR+A +G +TIA +V A G + +MAG+GV+ N +L++ TGVT+VHASC G VV + ++ FGF+ + G ++TD A + LA + Sbjct: 8 RVRLEVCVDSPAGVAAAIKGGADRLELCAALVVGGLTPSRGLMALAAA--------SGRP-AYAMIRPRPGDFVYGPADLDVMGDDIDTVRALGLPGVVLGASLPSG-ELDAAALSILV--------DRAGGLGLTLHRAIDLTPDPIEAL-DIAIEL---GFERVLTSGCARTAVEGAETIAELVDHAQGR-ISIMAGSGVTPDNAVDLIRQTGVTEVHASC--------------GMAPAVVDQHLLHFGFV-QPGARETDAATVMWLAAAI 243
BLAST of NO25G00500 vs. NCBI_GenBank
Match: WP_026616748.1 (copper homeostasis protein CutC [Ensifer aridi]) HSP 1 Score: 173.3 bits (438), Expect = 1.100e-39 Identity = 112/225 (49.78%), Postives = 139/225 (61.78%), Query Frame = 0 Query: 17 VLLEVCVDSLQGVATALRHGADRIELCSALEVGGLTPSLGLMETAASLVASQHLERGPP--EVVAMIRPRSGDFSYSAMDLAVMKRDIECARRVGLAGVVFGSTTASDTDLDLTAIRSLVAVAQTPHLSHSTPFSITLHRAIDLSPDPVASLRSMLKELPPGSIDRVLTSGGARSAWDGRDTIARMVKAAVGSGVVVMAGAGVSVANVSELVKATGVTDVHASCS 240 +LLEVCVD QG+A A+ GADRIELCSAL VGGLTPS GLM A GPP V AMIRPR GDF Y A DL VM+RDI+ AR GLAGVV G+ + SD LD + L H+ +TLHRA DL PD A + EL +R+LTSGGAR+A + DT+AR+V+ A G V +M G+GVS++++ L+ VT+VH+SCS Sbjct: 4 ILLEVCVDDAQGLAAAMEGGADRIELCSALAVGGLTPSPGLMALA-----------GPPPVPVYAMIRPRPGDFVYGAADLDVMRRDIDAARNAGLAGVVLGA-SLSDGRLDARMLTKLA--------GHAAGMGLTLHRAFDLVPD-FAEAIEIAVEL---GFERILTSGGARTAPEAVDTLARLVELAAGR-VSIMPGSGVSLSSIDALLPRLAVTEVHSSCS 203 The following BLAST results are available for this feature:
BLAST of NO25G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00500 ID=NO25G00500|Name=NO25G00500|organism=Nannochloropsis oceanica|type=gene|length=965bpback to top protein sequence of NO25G00500.1 >NO25G00500.1-protein ID=NO25G00500.1-protein|Name=NO25G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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