NO25G00440, NO25G00440 (gene) Nannochloropsis oceanica

Overview
NameNO25G00440
Unique NameNO25G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1966
Alignment locationchr25:125700..127665 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:125700..127665 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL046nonsL046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR074ngnoR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00440.1NO25G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00440.1NO25G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00440 ID=NO25G00440|Name=NO25G00440|organism=Nannochloropsis oceanica|type=gene|length=1966bp
ATGCCGAGAGGGGTGAAGGAGGTGGTGAAAGGTGGAAATAGCAACAGTTT
TGGCGTTAGCGGTGCCAGCGACAGAATTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGCCGCAGCAACAGCAACAGTGATGGCTGCGACAGCAGTGGG
CGTGAAGAAGAGGACGATGAGGAGGAGGAAAAAGGAAATGGGGAAGAGCG
CAGGCAGGAGGAAGAGgtaggggcgggtgggactggggcgaagggagggc
aatcctttctgatagcggccacggccaaggggtggctatgggggggcggg
cacagAGGACTCTGGGAGAGATGCTTGAGGAACCCGACATGCAGTTCCTC
AAACGCTGGTCCCTCAAGATGCAGCCTGGCCTTGCCGAGGCGACTGCACG
Ggtaagagtataataagtgggagggaaggagggggagagctcgtgcgaga
aagagagagcgagtgagagattgtgcgtaatgtgtgtaggcgtaaatgag
tgggcggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtggtctctct
ctctctctctctccctatctatctatttatctatcgatctatctataaca
cacacacacagagagagagagagagagagagagagacacacacacacaca
cacagagacacacagagagatgacgtgttgtttgtgccaaacacacaaat
acgtaactgtgtctcattatttgcgattgcctctacgcatccacttcatg
cagccctgcttcctctgtccttgcccttccattccctgcagGAGCACGTC
GAGAGGGTGCTGACGGAGATATACGTGGCCTGTCGTCTCGCCAAGCGCGC
CATCCCCCGCACCGAGGAGGCCATCATGAGCTGGGCGCTGCAGTACGGGC
ACTGGCCGGAGTCGAAATCCCAGGTGCAAGCCAGCGACCGCCACAGGCTC
TGGGGGCTGTTCTTGCGGAGGAAGGTCAGGGCTAGAGgtgaggcgcgagg
gcgggggcaagaaagggcaggtggatccagcagccgcattagcagcagta
gcactaccagcagtactcgtaccaatagcaccaccaaccgctgcatcatc
tgcagCAGGAATAGGAGCAGGGGGGCGAGGAAGGCAAGGAGGACGAGGAC
GAGGACGTGGAGGAGGAGGACGTGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGAGGGgtaaaatagaagccgaagtggcggtagcgaa
aaagcggaaaggccgctggccacgacagcagCAGAAAGGGGAAGAGAGAA
GAAGCAGAAGCAGGAGCAGGATGGACAGCAGCAGCTGCGACTGCAGGCGC
ACAGTCTGAAGTTGGAGGCGATAGGGGAAGGGAAAGGTGTCGAAGGAGGA
AGGGGGCGAGGACGAGAAAGAGGGAGAGGACGAGGAGGAGGAGGAGGAGG
AGGAGGAGGACGACGACGACGAGGAAGGTGGAGAAAAGAAGAGGCCTCTG
CGCTGGCGATAGCGACGACCAAGAAGACAATGAGGAGTATGAGGTCATCC
GCAGCCAAGGATCGAGCAATCATTCAGGATGATGATGAGATAGAGGAGGA
GGAGAGGGAGGAGAAGGGGGAGGAGGGTTGGTGGGGGGAGGAGCAGAAGG
AGCTTGCTGCGGCGAGATCGGAAGATGGGAAGGAGGAGATGCCCATGGAC
GAGGAGAGGGCGGTTGTGGGCGACAGAGGGTGGGAGGTCGCGGCGACCGT
GTGTCGTTCGGCCGGGCAGTCCCGCTTCACCTCGAAGGACGGCGAGGATG
AGGACGAAGACGAGGACGAGGCTTCTCTGGCCAGGCAAGGCGGGGCGGCG
ACGCCGAGAATCTCGATGGATGAGGACGAAGACGACACACCACCCCTCAT
CCTTGACCCGCGCTGA
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protein sequence of NO25G00440.1

>NO25G00440.1-protein ID=NO25G00440.1-protein|Name=NO25G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MPRGVKEVVKGGNSNSFGVSGASDRISSSSSSSSSSSRSNSNSDGCDSSG
REEEDDEEEEKGNGEERRQEEERTLGEMLEEPDMQFLKRWSLKMQPGLAE
ATAREHVERVLTEIYVACRLAKRAIPRTEEAIMSWALQYGHWPESKSQVQ
ASDRHRLWGLFLRRKVRARAGIGAGGRGRQGGRGRGRGGGGRGGGGGGGG
GGGGGGRAERGREKKQKQEQDGQQQLRLQAHSLKLEAIGEGKGVEGGRGR
GRERGRGRGGGGGGGGGRRRRGRWRKEEASALAIATTKKTMRSMRSSAAK
DRAIIQDDDEIEEEEREEKGEEGWWGEEQKELAAARSEDGKEEMPMDEER
AVVGDRGWEVAATVCRSAGQSRFTSKDGEDEDEDEDEASLARQGGAATPR
ISMDEDEDDTPPLILDPR*
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Synonyms
Publications