NO25G00440.1, NO25G00440.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G00440.1
Unique NameNO25G00440.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1257
Alignment locationchr25:125700..127665 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:125700..127665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00440NO25G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G00440.1NO25G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G00440.1.cds1NO25G00440.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00440.1.cds2NO25G00440.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00440.1.cds3NO25G00440.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00440.1.cds4NO25G00440.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00440.1.cds5NO25G00440.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G00440.1 ID=NO25G00440.1|Name=NO25G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1257bp
ATGCCGAGAGGGGTGAAGGAGGTGGTGAAAGGTGGAAATAGCAACAGTTT
TGGCGTTAGCGGTGCCAGCGACAGAATTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGCCGCAGCAACAGCAACAGTGATGGCTGCGACAGCAGTGGG
CGTGAAGAAGAGGACGATGAGGAGGAGGAAAAAGGAAATGGGGAAGAGCG
CAGGCAGGAGGAAGAGAGGACTCTGGGAGAGATGCTTGAGGAACCCGACA
TGCAGTTCCTCAAACGCTGGTCCCTCAAGATGCAGCCTGGCCTTGCCGAG
GCGACTGCACGGGAGCACGTCGAGAGGGTGCTGACGGAGATATACGTGGC
CTGTCGTCTCGCCAAGCGCGCCATCCCCCGCACCGAGGAGGCCATCATGA
GCTGGGCGCTGCAGTACGGGCACTGGCCGGAGTCGAAATCCCAGGTGCAA
GCCAGCGACCGCCACAGGCTCTGGGGGCTGTTCTTGCGGAGGAAGGTCAG
GGCTAGAGCAGGAATAGGAGCAGGGGGGCGAGGAAGGCAAGGAGGACGAG
GACGAGGACGTGGAGGAGGAGGACGTGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGGAGGGCAGAAAGGGGAAGAGAGAAGAAGCAGAA
GCAGGAGCAGGATGGACAGCAGCAGCTGCGACTGCAGGCGCACAGTCTGA
AGTTGGAGGCGATAGGGGAAGGGAAAGGTGTCGAAGGAGGAAGGGGGCGA
GGACGAGAAAGAGGGAGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGG
ACGACGACGACGAGGAAGGTGGAGAAAAGAAGAGGCCTCTGCGCTGGCGA
TAGCGACGACCAAGAAGACAATGAGGAGTATGAGGTCATCCGCAGCCAAG
GATCGAGCAATCATTCAGGATGATGATGAGATAGAGGAGGAGGAGAGGGA
GGAGAAGGGGGAGGAGGGTTGGTGGGGGGAGGAGCAGAAGGAGCTTGCTG
CGGCGAGATCGGAAGATGGGAAGGAGGAGATGCCCATGGACGAGGAGAGG
GCGGTTGTGGGCGACAGAGGGTGGGAGGTCGCGGCGACCGTGTGTCGTTC
GGCCGGGCAGTCCCGCTTCACCTCGAAGGACGGCGAGGATGAGGACGAAG
ACGAGGACGAGGCTTCTCTGGCCAGGCAAGGCGGGGCGGCGACGCCGAGA
ATCTCGATGGATGAGGACGAAGACGACACACCACCCCTCATCCTTGACCC
GCGCTGA
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protein sequence of NO25G00440.1

>NO25G00440.1-protein ID=NO25G00440.1-protein|Name=NO25G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MPRGVKEVVKGGNSNSFGVSGASDRISSSSSSSSSSSRSNSNSDGCDSSG
REEEDDEEEEKGNGEERRQEEERTLGEMLEEPDMQFLKRWSLKMQPGLAE
ATAREHVERVLTEIYVACRLAKRAIPRTEEAIMSWALQYGHWPESKSQVQ
ASDRHRLWGLFLRRKVRARAGIGAGGRGRQGGRGRGRGGGGRGGGGGGGG
GGGGGGRAERGREKKQKQEQDGQQQLRLQAHSLKLEAIGEGKGVEGGRGR
GRERGRGRGGGGGGGGGRRRRGRWRKEEASALAIATTKKTMRSMRSSAAK
DRAIIQDDDEIEEEEREEKGEEGWWGEEQKELAAARSEDGKEEMPMDEER
AVVGDRGWEVAATVCRSAGQSRFTSKDGEDEDEDEDEASLARQGGAATPR
ISMDEDEDDTPPLILDPR*
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mRNA from alignment at chr25:125700..127665-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G00440.1 ID=NO25G00440.1|Name=NO25G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1966bp|location=Sequence derived from alignment at chr25:125700..127665- (Nannochloropsis oceanica)
ATGCCGAGAGGGGTGAAGGAGGTGGTGAAAGGTGGAAATAGCAACAGTTT
TGGCGTTAGCGGTGCCAGCGACAGAATTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGCCGCAGCAACAGCAACAGTGATGGCTGCGACAGCAGTGGG
CGTGAAGAAGAGGACGATGAGGAGGAGGAAAAAGGAAATGGGGAAGAGCG
CAGGCAGGAGGAAGAGGTAGGGGCGGGTGGGACTGGGGCGAAGGGAGGGC
AATCCTTTCTGATAGCGGCCACGGCCAAGGGGTGGCTATGGGGGGGCGGG
CACAGAGGACTCTGGGAGAGATGCTTGAGGAACCCGACATGCAGTTCCTC
AAACGCTGGTCCCTCAAGATGCAGCCTGGCCTTGCCGAGGCGACTGCACG
GGTAAGAGTATAATAAGTGGGAGGGAAGGAGGGGGAGAGCTCGTGCGAGA
AAGAGAGAGCGAGTGAGAGATTGTGCGTAATGTGTGTAGGCGTAAATGAG
TGGGCGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGGTCTCTCT
CTCTCTCTCTCTCCCTATCTATCTATTTATCTATCGATCTATCTATAACA
CACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGACACACACACACACA
CACAGAGACACACAGAGAGATGACGTGTTGTTTGTGCCAAACACACAAAT
ACGTAACTGTGTCTCATTATTTGCGATTGCCTCTACGCATCCACTTCATG
CAGCCCTGCTTCCTCTGTCCTTGCCCTTCCATTCCCTGCAGGAGCACGTC
GAGAGGGTGCTGACGGAGATATACGTGGCCTGTCGTCTCGCCAAGCGCGC
CATCCCCCGCACCGAGGAGGCCATCATGAGCTGGGCGCTGCAGTACGGGC
ACTGGCCGGAGTCGAAATCCCAGGTGCAAGCCAGCGACCGCCACAGGCTC
TGGGGGCTGTTCTTGCGGAGGAAGGTCAGGGCTAGAGGTGAGGCGCGAGG
GCGGGGGCAAGAAAGGGCAGGTGGATCCAGCAGCCGCATTAGCAGCAGTA
GCACTACCAGCAGTACTCGTACCAATAGCACCACCAACCGCTGCATCATC
TGCAGCAGGAATAGGAGCAGGGGGGCGAGGAAGGCAAGGAGGACGAGGAC
GAGGACGTGGAGGAGGAGGACGTGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGAGGGGTAAAATAGAAGCCGAAGTGGCGGTAGCGAA
AAAGCGGAAAGGCCGCTGGCCACGACAGCAGCAGAAAGGGGAAGAGAGAA
GAAGCAGAAGCAGGAGCAGGATGGACAGCAGCAGCTGCGACTGCAGGCGC
ACAGTCTGAAGTTGGAGGCGATAGGGGAAGGGAAAGGTGTCGAAGGAGGA
AGGGGGCGAGGACGAGAAAGAGGGAGAGGACGAGGAGGAGGAGGAGGAGG
AGGAGGAGGACGACGACGACGAGGAAGGTGGAGAAAAGAAGAGGCCTCTG
CGCTGGCGATAGCGACGACCAAGAAGACAATGAGGAGTATGAGGTCATCC
GCAGCCAAGGATCGAGCAATCATTCAGGATGATGATGAGATAGAGGAGGA
GGAGAGGGAGGAGAAGGGGGAGGAGGGTTGGTGGGGGGAGGAGCAGAAGG
AGCTTGCTGCGGCGAGATCGGAAGATGGGAAGGAGGAGATGCCCATGGAC
GAGGAGAGGGCGGTTGTGGGCGACAGAGGGTGGGAGGTCGCGGCGACCGT
GTGTCGTTCGGCCGGGCAGTCCCGCTTCACCTCGAAGGACGGCGAGGATG
AGGACGAAGACGAGGACGAGGCTTCTCTGGCCAGGCAAGGCGGGGCGGCG
ACGCCGAGAATCTCGATGGATGAGGACGAAGACGACACACCACCCCTCAT
CCTTGACCCGCGCTGA
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Coding sequence (CDS) from alignment at chr25:125700..127665-

>NO25G00440.1 ID=NO25G00440.1|Name=NO25G00440.1|organism=Nannochloropsis oceanica|type=CDS|length=1257bp|location=Sequence derived from alignment at chr25:125700..127665- (Nannochloropsis oceanica)
ATGCCGAGAGGGGTGAAGGAGGTGGTGAAAGGTGGAAATAGCAACAGTTT
TGGCGTTAGCGGTGCCAGCGACAGAATTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGCCGCAGCAACAGCAACAGTGATGGCTGCGACAGCAGTGGG
CGTGAAGAAGAGGACGATGAGGAGGAGGAAAAAGGAAATGGGGAAGAGCG
CAGGCAGGAGGAAGAGAGGACTCTGGGAGAGATGCTTGAGGAACCCGACA
TGCAGTTCCTCAAACGCTGGTCCCTCAAGATGCAGCCTGGCCTTGCCGAG
GCGACTGCACGGGAGCACGTCGAGAGGGTGCTGACGGAGATATACGTGGC
CTGTCGTCTCGCCAAGCGCGCCATCCCCCGCACCGAGGAGGCCATCATGA
GCTGGGCGCTGCAGTACGGGCACTGGCCGGAGTCGAAATCCCAGGTGCAA
GCCAGCGACCGCCACAGGCTCTGGGGGCTGTTCTTGCGGAGGAAGGTCAG
GGCTAGAGCAGGAATAGGAGCAGGGGGGCGAGGAAGGCAAGGAGGACGAG
GACGAGGACGTGGAGGAGGAGGACGTGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGGAGGGCAGAAAGGGGAAGAGAGAAGAAGCAGAA
GCAGGAGCAGGATGGACAGCAGCAGCTGCGACTGCAGGCGCACAGTCTGA
AGTTGGAGGCGATAGGGGAAGGGAAAGGTGTCGAAGGAGGAAGGGGGCGA
GGACGAGAAAGAGGGAGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGG
ACGACGACGACGAGGAAGGTGGAGAAAAGAAGAGGCCTCTGCGCTGGCGA
TAGCGACGACCAAGAAGACAATGAGGAGTATGAGGTCATCCGCAGCCAAG
GATCGAGCAATCATTCAGGATGATGATGAGATAGAGGAGGAGGAGAGGGA
GGAGAAGGGGGAGGAGGGTTGGTGGGGGGAGGAGCAGAAGGAGCTTGCTG
CGGCGAGATCGGAAGATGGGAAGGAGGAGATGCCCATGGACGAGGAGAGG
GCGGTTGTGGGCGACAGAGGGTGGGAGGTCGCGGCGACCGTGTGTCGTTC
GGCCGGGCAGTCCCGCTTCACCTCGAAGGACGGCGAGGATGAGGACGAAG
ACGAGGACGAGGCTTCTCTGGCCAGGCAAGGCGGGGCGGCGACGCCGAGA
ATCTCGATGGATGAGGACGAAGACGACACACCACCCCTCATCCTTGACCC
GCGCTGA
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Synonyms
Publications