NO25G00340, NO25G00340 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00340 vs. NCBI_GenBank
Match: EWM21547.1 (hypothetical protein Naga_100684g1 [Nannochloropsis gaditana]) HSP 1 Score: 228.8 bits (582), Expect = 5.700e-56 Identity = 107/151 (70.86%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MILQTLKRALALVAGPPTGPRARPKAAVWLQLALVCALTACPTSHTDAQEDFISLVREGAEIEHQGRLYWVQDPRDELCVGDVGLMMPCGDANLWGVRAEASKKKEEEANKRYTLELMSGRQLGATWASEEAGKNAECLARRNSFRKTSEV 152
MI+QTL++ALA +AGPPTGPRARPKAAVWLQLALVCALT CPTSHTDAQEDFISLVR+G E+EH GRLYW+QDPRDELCVGD G+MMPCGDANLWGVR E ++ ++ Y+LELMSG+QLG+ WA G++A+CL RR ++SEV
Sbjct: 66 MIVQTLQQALAFIAGPPTGPRARPKAAVWLQLALVCALTTCPTSHTDAQEDFISLVRQGVEMEHNGRLYWIQDPRDELCVGDAGVMMPCGDANLWGVRKETRRRGKKGTG--YSLELMSGKQLGSAWAKGGVGEDADCLVRRQGGWQSSEV 214
BLAST of NO25G00340 vs. NCBI_GenBank
Match: XP_002287518.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94961.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 114.0 bits (284), Expect = 2.000e-21 Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query: 268 LDVASGLRFPADMGLFLADSHQDAHQQVFMGGGAF--RFFGLNIYQVALYIDTHRAAASPVLRPFHGQDVASLQQNETFFQAMMS----GQDPVK-----YSRSLYIKLLIPLKASTMKGALEDGWN-MEPEAKALFLEASFKHALA------------------------------TRCCSKGTELLFTWSAEDVLEVRLNGRLVEAFSNHALAQELFANYVNDDPISPQAKKGFVTQYP---AFLAHAAASVSASPIPRK 485
+D + L +P D+ +L + ++A + MG G + F + +Y ALY+ A P + L + F+ +MS G+DP + R+L +K + L M+ +LE W+ + E K+L +E+SF+ +A CC++GTEL+FTW E+RL+GR+++ F +A+ +F+ Y+ND+PIS AKK FV +P A LA SA PI ++
Sbjct: 587 VDPLTSLEYPTDLCDYLGQTKKEAGRHTLMGVGQYYRTAFNIKVYGAALYVAKRDVLADPKFGRYAALSPDELSNRDDFYDHLMSMPSPGEDPAVAPGGFFDRTLMVKTNMQLSTDAMRKSLEADWSLLTDEMKSLIIESSFRERMADDRMLEKIKSKENSSRCSCGQSAPPEYEAEASCCARGTELVFTWRKNGDFEIRLDGRVMDIFPRPDMAKGIFSEYMNDNPISVDAKKHFVDGFPFLLAPLAQVKGMSSAVPIAQE 848
BLAST of NO25G00340 vs. NCBI_GenBank
Match: EJK76546.1 (hypothetical protein THAOC_01687 [Thalassiosira oceanica]) HSP 1 Score: 99.4 bits (246), Expect = 5.200e-17 Identity = 63/263 (23.95%), Postives = 114/263 (43.35%), Query Frame = 0
Query: 268 LDVASGLRFPADMGLFLADSHQDAHQQVFMGGGAF--RFFGLNIYQVALYIDTHRAAASPVLRPFHGQDVASLQQNETFFQAMMSGQDP---------VKYSRSLYIKLLIPLKASTMKGALEDGWN-MEPEAKALFLEASFKHALATR------------------------------CCSKGTELLFTWSAEDVLEVRLNGRLVEAFSNHALAQELFANYVNDDPISPQAKKGFVTQYPAFLAH-AAASVSASPIPRKRDR 488
+D + L +P D+ +L +++ + G G + F + +Y A Y+ A F L++ + F+ +M+ DP ++ R+L+IK+ + L M+ +LE W+ + E K+ + +S + A CC++GTEL+FTW E+R++GR+++ F +A+ +F+ Y+N+DPIS AK F +P LA A S +P +R
Sbjct: 655 IDPLTSLAYPTDLCEYLGHKKEESGRHTLTGVGQYYRTAFNIKVYGAAFYVSKRDVLADSKFGEFAALSADELRERDDFYTHLMNMPDPDEDPASTLGGRFDRTLFIKMNMQLSTDAMRKSLEADWSLLTEEMKSTVIGSSLRERQADEHMQAKIQSKENSSNCSCGQLAPDELNADPSCCARGTELVFTWRKNGDFEIRIDGRIMDVFRRPDIAKGIFSEYLNNDPISLDAKARFADGFPFLLAPLAQVKGMLSAVPHTHER 917
BLAST of NO25G00340 vs. NCBI_GenBank
Match: XP_002179803.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48789.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.4 bits (241), Expect = 2.000e-16 Identity = 68/240 (28.33%), Postives = 104/240 (43.33%), Query Frame = 0
Query: 269 DVASGLRFPADMGLFLADSHQDAHQQVFMGGGAFRFFGLNIYQVALYIDTHRAAAS-PVLRPFHGQDVASLQQNETFFQAMMSGQDPV-----KYSRSLYIKLLIPLKASTMKGALEDGWNM-EPEAKALFLEASFKHALATR------------------------------CCSKGTELLFTWSAEDVLEVRLNGRLVEAFSNHALAQELFANYV-NDDPISPQAKKGFVTQYPAFLA 471
D +GL + D+ +L ++ + MG G ++ F + +Y +A Y+ +S V PF A L++ F++ + Q P + R+L IK + L A T++ +L W M EAK L + +S + A + CC++GTEL FTW LEVRLN RL+E F +AQ +F Y DDP+S V +P LA
Sbjct: 333 DPHTGLEYQTDLCGYLGHDRKEKGRHTLMGVGQYKKFVVKVYGIAYYVSKRDVLSSNHVFEPFAALSTAELRKRPDFYEHLRHMQSPESPDRGSFERTLMIKTNMQLAAETIRNSLHADWKMLTEEAKHLLINSSIQPRPANQETLALIQSPNNPSRCSCSQVAPPEYQADADCCARGTELAFTWRKNGDLEVRLNRRLMETFQRPDIAQAIFYEYFRQDDPMSTDFVDHAVEGFPFLLA 572
BLAST of NO25G00340 vs. NCBI_GenBank
Match: EWM21548.1 (hypothetical protein Naga_104005g1 [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 43/56 (76.79%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 297 MGGGAFRFFGLNIYQVALYIDTHRAAASPVLRPFHGQDVASLQQNETFFQAMMSGQ 353
MGGGAFRFFG+NIYQV+LYI+T RAAASP+LR F GQDVA+LQ+NE+F++AMMSG+
Sbjct: 1 MGGGAFRFFGINIYQVSLYINTDRAAASPLLRDFVGQDVAALQKNESFYRAMMSGE 56
BLAST of NO25G00340 vs. NCBI_GenBank
Match: GAX22528.1 (hypothetical protein FisN_14Hh150 [Fistulifera solaris]) HSP 1 Score: 90.9 bits (224), Expect = 1.800e-14 Identity = 65/238 (27.31%), Postives = 106/238 (44.54%), Query Frame = 0
Query: 269 DVASGLRFPADMGLFLADSHQDAHQQVFMGGGAF-RFFGLNIYQVALYIDTHRAAASPVLRPFHGQDVASLQQNETFFQAM--MSGQD--PVKYSRSLYIKLLIPLKASTMKGALEDGWNM-EPEAKALFLEASFK------HALA------------------------TRCCSKGTELLFTWSAEDVLEVRLNGRLVEAFSNHALAQELFANYVN-DDPISPQAKKGFVTQYPAFL 470
D +GL + D+ +L ++ + MG G + + + + +Y VA Y+ + A P + L+ F++ + MS QD ++ R+L +K + L TM+ +L W+M EAK ++S K H L CC++GTE+ FTW EVRLNGRL++ F+ +A+ +F Y+ DDPISP + V +P L
Sbjct: 398 DPKTGLDYLTDLRQYLGFEKKEHGRHTLMGVGQYIKGYVVKVYGVAFYVSKNDVLADPTFAKYATLSADELRARPDFYEHLQRMSLQDGKAGRFDRTLLLKTNMQLSTETMRSSLGADWSMLTDEAKETLADSSLKPRPADEHMLRLIESQENPSRCSCSQVAPAEYDADPNCCARGTEVAFTWRKNGDFEVRLNGRLMDTFARPDMAEGIFYEYLRYDDPISPDLRDHVVDGFPFLL 635
BLAST of NO25G00340 vs. NCBI_GenBank
Match: GAX10644.1 (hypothetical protein FisN_14Lh150 [Fistulifera solaris]) HSP 1 Score: 87.4 bits (215), Expect = 2.000e-13 Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 0
Query: 269 DVASGLRFPADMGLFLADSHQDAHQQVFMGGGAF-RFFGLNIYQVALYIDTHRAAASPVLRPFHGQDVASLQQNETFFQAM----MSGQDPV-KYSRSLYIKLLIPLKASTMKGALEDGWNM-EPEAKALFLEASFK------HALA------------------------TRCCSKGTELLFTWSAEDVLEVRLNGRLVEAFSNHALAQELFANYVN-DDPISPQAKKGFVTQYPAFL 470
D +GL + D+ +L ++ + MG G + + + + +Y VA Y+ + A P + L+ F++ + + G ++ R+L +K + L TM+ +L W+M EAK ++S K H L CC++GTE+ FTW EVRLNGRL++ F+ +A+ +F Y+ DDPISP + V +P L
Sbjct: 35 DPKTGLDYLTDLRQYLGFEKKEHGRHTLMGVGQYIKGYVVKVYGVAFYVSKNDVLADPTFARYATLSADELRGRPDFYEHLQRMNLQGDGKAGRFDRTLLLKTNMQLSTETMRSSLGADWSMLTDEAKETLADSSLKPRPADEHMLRLIESQENPSRCSCSQVAPAEYDADPNCCARGTEVAFTWRKNGNFEVRLNGRLMDTFARPDMAEGIFYEYLRYDDPISPDLRDHVVDGFPFLL 273
BLAST of NO25G00340 vs. NCBI_GenBank
Match: EWM21553.1 (hypothetical protein Naga_100564g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 70.5 bits (171), Expect = 2.600e-8 Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 0
Query: 724 RLRRGGGSMRHLALERSKHEWDAYLRRTMATTAHR 759
RLRRGGGSMR LALERSKHEWDAYLR+TMATTAHR
Sbjct: 215 RLRRGGGSMRALALERSKHEWDAYLRKTMATTAHR 249 The following BLAST results are available for this feature:
BLAST of NO25G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00340 ID=NO25G00340|Name=NO25G00340|organism=Nannochloropsis oceanica|type=gene|length=3977bpback to top protein sequence of NO25G00340.1 >NO25G00340.1-protein ID=NO25G00340.1-protein|Name=NO25G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bpback to top Synonyms
Publications
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