NO25G00300, NO25G00300 (gene) Nannochloropsis oceanica

Overview
NameNO25G00300
Unique NameNO25G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1454
Alignment locationchr25:91812..93265 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:91812..93265 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR043ncniR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00300.1NO25G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641918gene_8513Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00300.1NO25G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00300 ID=NO25G00300|Name=NO25G00300|organism=Nannochloropsis oceanica|type=gene|length=1454bp
ATGACATCTACCAGCACCAGCACCAGCGGCGAACAAGACACCCCTCCTGC
TTCCCAGGGCGGCCGTCAAACCCTGTCCGTCCTCAACCAAGCCCGTGTGG
CCGCCCTCCTACGAGACCAAGAACGGGACCGCCGGGTGGCCGAGCGGAAG
CGGGCACCAATCGACTTATCGCTCCTTTTTACTAAGACTGCGCAGGACGC
GCCGCGTATCGGGGAGTGGGACAGCCCCGCCTCTTCGTGCTCCTTCCCGT
CCACGCGACACGGTGGCAGCAGTGAGAGTAGCGTGGGAGAAGGAAAGGGG
GTGCTGACAACGGAGAACTGGCCGGAAATCGCAGTACTATCACGCGTTTG
TAAGAGTATGTCTTCAACAATGATGTGGGACGCGACCTCCTCCACTTCAC
CATCCTCCGCCATGAGAGGAGGAGAAGAAGAAAATAGGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGGAGTCCTGCATCAGGGCGGCGGGA
AACCGACAAGTCGTTTTCCTCCCTTTTGCTTTCTTCTGGAGAGAAATTGA
TGATTGAGGGGAAAGGCGGACACTTCTACCCATACAGTGGGGAGGAAGAG
GAGGAGCGGGAGGGGGAAGGAGGTGCAACGCAGCCGCAGCTTCCTCCTTA
CCCCGTGGCCCACTACACCCGCACGCCGCACACCGTCCTCATCAAGCGGA
AGGCCTCCATTTGCCCGTCCTTCACTCGCTTCCAACAGGAAGCCGATGCT
CGCCTGGCCAGGGCTAGCATGCGGGAGCATCAGCTGCTCGGGCGAGGAGG
AGGAGGAGGAGGAAGAGGAGGAGACGGAGGAGGAGAGTTAAAAGGGGGAG
TACGGTTGATGCGTCCCTTTGTGAGAGCTGAGTCTGAGGCCGAAACTGGA
GGGAAGAAAGCTGATGACGGGGGGACGAGTGCCATGGAGGAGGTGGAGGA
GAAGGGAAAGGGAGGGTGCGTGGGAATGGAGGATGACGAGGAGTAAGAAG
AACGGGGAACGGCGCCGCAAGAGGAGGAGGAGGGAGAAGGAGAGGAAGAA
GGCAGTAATCCAATGATGGAGGTAGCGGATACGGGGGAGGGGGAAGAAGA
GATGAAGGAAGGGGAGTGAAGTAGTCGAATGATGGAAGTAGCGGATACGG
GGGAGGGGGTAGAGGAGATGGAGGAAGGGGAGTGAAGTAGTCGAATGATG
GAAGTAGCGGATACGGGGGAGGGGGTAGAGGAGATGGAGGAAGGGGAGTG
AAGTAGAGGGGCCAGGTGTGGCCTGAGGTATAAGGCGCGACGACAGGCAT
GCCTCCACTGGGCCCGTGCGCAGAGTAACTCACGCAGCAATCAACCAGAG
AGAGAAGGAAACGCGATGATGGGGAGGAACAGCATGAGACGACAAGGAGC
AAAGGAGGAGGCTTCAGTAAACCTTGCCGCATCCACCCGCATGCTTGTGC
TGGC
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protein sequence of NO25G00300.1

>NO25G00300.1-protein ID=NO25G00300.1-protein|Name=NO25G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MTSTSTSTSGEQDTPPASQGGRQTLSVLNQARVAALLRDQERDRRVAERK
RAPIDLSLLFTKTAQDAPRIGEWDSPASSCSFPSTRHGGSSESSVGEGKG
VLTTENWPEIAVLSRVCKSMSSTMMWDATSSTSPSSAMRGGEEENRGGGG
GGGGGGGGGSPASGRRETDKSFSSLLLSSGEKLMIEGKGGHFYPYSGEEE
EEREGEGGATQPQLPPYPVAHYTRTPHTVLIKRKASICPSFTRFQQEADA
RLARASMREHQLLGRGGGGGGRGGDGGGELKGGVRLMRPFVRAESEAETG
GKKADDGGTSAMEEVEEKGKGGCVGMEDDEE*
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Synonyms
Publications