NO25G00160, NO25G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00160 vs. NCBI_GenBank
Match: XP_012195879.1 (hypothetical protein SPRG_01924 [Saprolegnia parasitica CBS 223.65] >KDO33112.1 hypothetical protein SPRG_01924 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 104.4 bits (259), Expect = 7.500e-19 Identity = 76/243 (31.28%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 15 GHLPLLQSWASEY------SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLLPAKR--VEMDWNPSSRFPFQGKG-------------REGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFL 237 GH P +++W Y + + +AG IRAAI L+ V +L +G G LPN+DL++ A L ++R V MD +R G R+ YFD L + F +LA+GP+G HA F+RH IDA+T+ A S G + LL + +E +R+++N+E +L+ F+ YL+ S FVS+ EY Y +VL+LLP L Sbjct: 222 GHSPAVEAWLDAYHNDPFATSNAALDMHAGVIRAAINLE---------TSGDAHRHNTVAVLGAGVNGQLPNLDLINSAVEALESERIPVAMDRCADARLDCDGDALSSTLRAVRRFVVRQLGASSALSSYFDGLYHLLRFIQTLAMGPSGPHANFIRHNIDAITLSAVQAS-----GATTPLSLLGWLRSIETTVRAMSNVEEKLHQSFYYYLLVSPRLFVSIGEYYYVLVLVLLPLFAHVL 450
BLAST of NO25G00160 vs. NCBI_GenBank
Match: XP_008612407.1 (hypothetical protein SDRG_08304 [Saprolegnia diclina VS20] >EQC34095.1 hypothetical protein SDRG_08304 [Saprolegnia diclina VS20]) HSP 1 Score: 98.6 bits (244), Expect = 4.100e-17 Identity = 83/276 (30.07%), Postives = 127/276 (46.01%), Query Frame = 0 Query: 15 GHLPLLQSWASEY------SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLLPAKR--VEMDWNPSSRFPFQGKGREG-------------XXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTS-LPFVFSSFLLLLCWSGGLYSFL 269 GH P +++W + Y S + +AG IRAAI L+ V +L +G G LPN+DL++ A L ++R V MD +R G YFD L + F +LA+GP+G HA F+R+ IDA+T+ A +D + LL + +E +R+++N+E +L+ F+ YL+ S FVS+ EY Y +VL+LLP L G+T+ L F+ L L+ + G FL Sbjct: 222 GHSPAVEAWLNAYHNDPFASSNAALDMHAGVIRAAINLE---------TSGDAHRHNTVAVLGAGVNGQLPNLDLINSAVEALESERIPVAMDRCADARLDCDGDALSSMLRAVRRFVVLQVGASPALSSYFDGLYHLLRFIQTLAMGPSGPHANFIRYNIDAITLAAVQAADATTP-----LSLLGWLRAIETTVRAMSNVEEKLHQSFYYYLLVSPRLFVSIGEYYYVLVLVLLPLFAHVLYL---IGHTAGLRTAFALALFLVAEALGAMVFL 480
BLAST of NO25G00160 vs. NCBI_GenBank
Match: CBJ27500.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.2 bits (243), Expect = 5.400e-17 Identity = 71/184 (38.59%), Postives = 94/184 (51.09%), Query Frame = 0 Query: 67 VHLLTSGARGALPNMDLLHLASTLLPAKRVEMDWNPSSRFPFQGK--------GREG--------XXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKA-EPTSDEDNQGGRRGMDL---LLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLP 231 V LLTSG G LPNMDLL++A + V + + S P G G+ YFDRL M GF S +GP+G HA FLRH +DALTI+ T E G+R + + + I+R ++NLE L+H FF Y+M S+ FVS+ EY YA+VLLL+P Sbjct: 286 VQLLTSGVNGELPNMDLLNVAVIHHERQGVGVRLDTCSA-PLHGDQLACLDAVGQAATAVDRHVPKKSDAVQGYFDRLFGMLGFMGSAVMGPSGPHAHFLRHSVDALTIRGLGRTGGEPAGTGKRAVSSGSGVSTTAAVVSIIRGVSNLEEELHHSFFSYIMLSKAAFVSIGEYAYALVLLLVP 468
BLAST of NO25G00160 vs. NCBI_GenBank
Match: CCI49472.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-16 Identity = 76/286 (26.57%), Postives = 123/286 (43.01%), Query Frame = 0 Query: 15 GHLPLLQSWASEYSEQGL-----IIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLL---------------PAKRVEMDWNP---------------SSRFPFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAE-PTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTSLPFVFSSFLLLLCWSGGL 265 G+ P +W Y + ++ AG IRAAI L++ LL +G G LPN+DL+++A L + + E + + FPF + Y +LR M F +SL GP G HA F+ + ID++T P + + L QGLE I+R+L+NLE +L+ F+LYL+P+ FVS+ EYIY +++L P + + S++ + + F SF+++ + GL Sbjct: 268 GYSPGTHAWLEAYYSDPILNTDTLVMRAGVIRAAINLEV---------TTQTESQPSFSLLVTGDNGQLPNLDLINVAVLALQKNGIFPSMSRCHIFDSTKTEQECSDILDTAFNKLHSFVGLIDSFPFSSHSTDN-IKSFVGEYLIKLRGMLRFMVSLTTGPTGSHAAFISYNIDSITTAMNIPKRERSAPDAQHKNFLEASLQGLELIIRALSNLEEKLHQSFYLYLLPTPQTFVSVGEYIYPLLMLCAPLVLQIARISIKTNGLRMAYAFISFIVVEVFGLGL 543
BLAST of NO25G00160 vs. NCBI_GenBank
Match: CCA14462.1 (transmembrane protein putative [Albugo laibachii Nc14]) HSP 1 Score: 95.5 bits (236), Expect = 3.500e-16 Identity = 78/291 (26.80%), Postives = 127/291 (43.64%), Query Frame = 0 Query: 15 GHLPLLQSWASEYSEQGL-----IIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLA----------------------------STLLPAKRVEM-------DWNPSSRFPFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDAL-TIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTSLPFVFSSFLLLLCWSGGL 265 G+ P Q+W Y + + AG IRAAI L++ LL SG G LPN+DL+++A S +L +++ D+ P +P + ++ Y +L M F +SLA+GP G HA F+ + ID++ T+ P+ + L QGLE ++RSL+NLE +L+ F+LYL+P+ FVS+ EYIY +++L P + S+ + + F SF+++ + GL Sbjct: 198 GYSPGTQAWLEAYFSDPVLNAETLAMRAGVIRAAINLEI---------TTQESNQPSFSLLVSGENGQLPNLDLINVAILAFQKNGIVPSMSRCRIHDQLKSEQGCSDMLSTAFIKLNRLLSVIDYFPFFSYPTRDIKKK------WGEYLFKLHGMVRFMVSLAIGPTGSHAAFISYNIDSITTVLNLPSRKRSGTEAQHENFLEATLQGLELMIRSLSNLEEKLHQSFYLYLLPTAQTFVSVGEYIYPLLMLCAPLVLELARISIGTSGLRMAYAFISFVIVESFGLGL 473
BLAST of NO25G00160 vs. NCBI_GenBank
Match: CCA21246.1 (transmembrane protein putative [Albugo laibachii Nc14]) HSP 1 Score: 95.5 bits (236), Expect = 3.500e-16 Identity = 78/291 (26.80%), Postives = 127/291 (43.64%), Query Frame = 0 Query: 15 GHLPLLQSWASEYSEQGL-----IIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLA----------------------------STLLPAKRVEM-------DWNPSSRFPFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDAL-TIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTSLPFVFSSFLLLLCWSGGL 265 G+ P Q+W Y + + AG IRAAI L++ LL SG G LPN+DL+++A S +L +++ D+ P +P + ++ Y +L M F +SLA+GP G HA F+ + ID++ T+ P+ + L QGLE ++RSL+NLE +L+ F+LYL+P+ FVS+ EYIY +++L P + S+ + + F SF+++ + GL Sbjct: 259 GYSPGTQAWLEAYFSDPVLNAETLAMRAGVIRAAINLEI---------TTQESNQPSFSLLVSGENGQLPNLDLINVAILAFQKNGIVPSMSRCRIHDQLKSEQGCSDMLSTAFIKLNRLLSVIDYFPFFSYPTRDIKKK------WGEYLFKLHGMVRFMVSLAIGPTGSHAAFISYNIDSITTVLNLPSRKRSGTEAQHENFLEATLQGLELMIRSLSNLEEKLHQSFYLYLLPTAQTFVSVGEYIYPLLMLCAPLVLELARISIGTSGLRMAYAFISFVIVESFGLGL 534
BLAST of NO25G00160 vs. NCBI_GenBank
Match: XP_008861260.1 (hypothetical protein H310_00305 [Aphanomyces invadans] >ETW09849.1 hypothetical protein H310_00305 [Aphanomyces invadans]) HSP 1 Score: 93.6 bits (231), Expect = 1.300e-15 Identity = 72/264 (27.27%), Postives = 112/264 (42.42%), Query Frame = 0 Query: 15 GHLPLLQSWASEY-----SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLLPAKRVE-------------------MDWNPSSRFPFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTSLPFVFSSF 255 G+ P +++W Y S + +AG IR AI L+ V + T+G G LPN+DL++ A L +R+ +D S P G Y RL M F +LA GP+G HA F+ + IDA+T+ A + + + L + + ++R ++NLE + + F+ YL+P+ FVS+ EY Y MVLL+LP L + G L F ++F Sbjct: 221 GYSPGVEAWLRSYHSDPFSTSSALEMHAGVIRGAINLE---------TSLNRRKYNSVGIFTAGINGQLPNLDLVNSAVETLENERIPIVLDRCADSSIVCDDLLAVLDLWVRSLVPRNWDG-----------YLTRLLTMFRFIATLATGPSGPHANFIHYNIDAITLTALHSDSQSSS----SFQLTNFMRAIATVVRGISNLEEKFHQSFYFYLLPTTRTFVSIGEYYYPMVLLMLPLFAHTLYIATNTGGLRLAFALAAF 460
BLAST of NO25G00160 vs. NCBI_GenBank
Match: XP_008861261.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW09850.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 93.6 bits (231), Expect = 1.300e-15 Identity = 72/264 (27.27%), Postives = 112/264 (42.42%), Query Frame = 0 Query: 15 GHLPLLQSWASEY-----SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLLPAKRVE-------------------MDWNPSSRFPFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFLTFSVRAGYTSLPFVFSSF 255 G+ P +++W Y S + +AG IR AI L+ V + T+G G LPN+DL++ A L +R+ +D S P G Y RL M F +LA GP+G HA F+ + IDA+T+ A + + + L + + ++R ++NLE + + F+ YL+P+ FVS+ EY Y MVLL+LP L + G L F ++F Sbjct: 219 GYSPGVEAWLRSYHSDPFSTSSALEMHAGVIRGAINLE---------TSLNRRKYNSVGIFTAGINGQLPNLDLVNSAVETLENERIPIVLDRCADSSIVCDDLLAVLDLWVRSLVPRNWDG-----------YLTRLLTMFRFIATLATGPSGPHANFIHYNIDAITLTALHSDSQSSS----SFQLTNFMRAIATVVRGISNLEEKFHQSFYFYLLPTTRTFVSIGEYYYPMVLLMLPLFAHTLYIATNTGGLRLAFALAAF 458
BLAST of NO25G00160 vs. NCBI_GenBank
Match: OQS06725.1 (transmembrane protein [Thraustotheca clavata]) HSP 1 Score: 91.7 bits (226), Expect = 5.100e-15 Identity = 67/244 (27.46%), Postives = 110/244 (45.08%), Query Frame = 0 Query: 10 EEKAWGHLPLLQSWASEY------SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLLHLASTLLPAKR--VEMDWNPSSRFPFQGKGREG---------------XXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLP 231 +++ +GH P +++W Y S + +AG IRAAI ++ V +L +G G LPN+DL++ A L ++ + MD + G Y RL M F +LA+GP+G HA F+R+ IDA+T+ A + D + R L+ + +E +R+++NLE +L+ FF YL+ + FVS+ EY Y + +LP Sbjct: 369 DDRRYGHSPGVEAWLEAYHNGPHISRNPALEMHAGVIRAAINIE---------TSLDSNRYNTVGVLGAGVNGQLPNLDLINTAVETLESEHIPIAMDRCSDIEYECHDDGLNNFIASIRKFLTNLLPQEYHGHISFYLPRLHHMLRFMQTLAIGPSGAHANFIRYNIDAITLSAFYSLDSPSTPLR----LVSWLRSIETSVRAMSNLEEKLHQSFFFYLLVAPRSFVSIGEYYYVLFFFMLP 599
BLAST of NO25G00160 vs. NCBI_GenBank
Match: XP_008899025.1 (hypothetical protein PPTG_06735 [Phytophthora parasitica INRA-310] >ETN15468.1 hypothetical protein PPTG_06735 [Phytophthora parasitica INRA-310]) HSP 1 Score: 90.9 bits (224), Expect = 8.600e-15 Identity = 70/246 (28.46%), Postives = 113/246 (45.93%), Query Frame = 0 Query: 15 GHLPLLQSWASEY-------SEQGLIIPYAGSIRAAILLDLPPXXXXXXXXXXXXXXERVHLLTSGARGALPNMDLL---------HLASTLLPAKRVEMDWNPSSRF--------PFQGKGREGXXXXXXXXYFDRLRKMSGFGLSLALGPNGGHACFLRHGIDALTIKAEPTSDEDNQGGRRGMDLLLLFQGLEKILRSLNNLEARLYHGFFLYLMPSRDHFVSLSEYIYAMVLLLLPFLPRFL 237 G+ P ++W Y QG++ AG IRAA+ L+ + V + T+G G LPN+DL+ H T+L V+ D S + Y L+ M F +LA GP+G HA F+ + ID++T+ T + + G R + + + +E ++R+L+NLE +L+ FFLY++PS FVS+ EYIYA++L++ P + L Sbjct: 211 GYAPGTEAWLQAYHLDPVDSGLQGVLPMRAGVIRAAVKLE---------TLYNSRHVDSVGIYTAGMNGQLPNLDLVNTAVRAFRQHQIPTILDRADVQEDGEHKSYVSRVLGSISSLNEQYTPPELKEKARNYLTNLKGMLHFMTTLATGPSGTHANFISYNIDSITLSL--TKSQTSVG--RPLASRDILRSIEMVVRALSNLEEKLHQSFFLYVLPSTSTFVSVGEYIYAVLLVISPAIAHLL 443 The following BLAST results are available for this feature:
BLAST of NO25G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00160 ID=NO25G00160|Name=NO25G00160|organism=Nannochloropsis oceanica|type=gene|length=4342bpback to top protein sequence of NO25G00160.1 >NO25G00160.1-protein ID=NO25G00160.1-protein|Name=NO25G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=480bpback to top protein sequence of NO25G00160.2 >NO25G00160.2-protein ID=NO25G00160.2-protein|Name=NO25G00160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top Synonyms
Publications
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