NO25G00100, NO25G00100 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_073603799.1 (DUF1904 domain-containing protein [Vibrio aerogenes] >SHI17192.1 hypothetical protein VA7868_02106 [Vibrio aerogenes CECT 7868]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP RF V LVQ ++ L ++ + F +ES+ +TF + G+P + P +VE+LWF RGQ IQDQVAV + K +RD ++ DV +V I ++ H YY NG+H+
Sbjct: 1 MPHFRFRAVEPRLVQSLSKTLIDDFQQPMQSPREDFTFESIHTTFYTE-GEPASMYP-FVEVLWFDRGQMIQDQVAVTITKRIRDAMS---------DPELDVAVVFIPLQPHQYYDNGSHY 111
BLAST of NO25G00100 vs. NCBI_GenBank
Match: KXJ62204.1 (pseudouridine synthase [Alteromonas sp. Nap_26]) HSP 1 Score: 74.7 bits (182), Expect = 3.800e-10 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP +R G+ VQ+VA + LA + + D F E + S F++ G P Y+E+LWF RGQD++ VAV + KA+R + + D+ +V + DYY+NG HF
Sbjct: 1 MPHIRARGLEIEAVQKVAGNIVEQLAKVTETPNDHFTLEYIASQFLTSGGASPAYP--YIEVLWFDRGQDMKSTVAVIIDKALRTVVDKN----------TDITVVFSDLNGADYYENGAHF 110
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_010293253.1 (DUF1904 domain-containing protein [Clostridium senegalense]) HSP 1 Score: 73.2 bits (178), Expect = 1.100e-9 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP L+ G+ + + V+T+L L II D F E + ST+I G+ + P + +E+ WF RGQDIQD+VA A+ K + E +P + ++ +E+ YY+NG HF
Sbjct: 1 MPMLKIRGIDESKILEVSTELIDELEKIIGCPRDYFSMELINSTYIMD-GKKVQAPSI-IEVSWFDRGQDIQDKVAKAITKYFKTE------------AMPCLDIIFHNLEEKRYYENGEHF 108
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_061994687.1 (DUF1904 domain-containing protein [Clostridium sp. ATCC 25772]) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-9 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP L+ G+ + V+T+L L IIK D F E V+ST+I G+ + P + +E+ WF RGQDIQD+VA ++ K + E +P + ++ + + YY+NG HF
Sbjct: 1 MPMLKIRGIEEEKILEVSTELINELEKIIKCPRDYFSIELVKSTYIMD-GEKVKAPNI-IEVSWFDRGQDIQDKVAKSITKHFKTE------------AMPCLDIIFHNLNEERYYENGEHF 108
BLAST of NO25G00100 vs. NCBI_GenBank
Match: GAL23872.1 (hypothetical protein JCM19239_7826 [Vibrio variabilis]) HSP 1 Score: 72.4 bits (176), Expect = 1.900e-9 Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP LRF + +V+ +++ L L ++ + F E + STF A Q P +VE+LWF RGQ+++D+VA + VR L +E DV ++ + +E + YY NG H+
Sbjct: 1 MPHLRFRALEQEMVKTLSSPLVDELQPLMDCPREDFTIEHISSTFFFDAQQSHAYP--FVEVLWFDRGQEVKDKVASVITNQVRSVLGKE----------RDVAVIFVALEPNSYYDNGNHY 110
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_040330022.1 (DUF1904 domain-containing protein [Clostridium ihumii]) HSP 1 Score: 72.4 bits (176), Expect = 1.900e-9 Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP L+ GV V V+ +L L +II+ D F E S +I I++PP +E+ WF RGQ++QD+VA+A+ K +DE DVI ++ E+ YY+NG HF
Sbjct: 1 MPILKVTGVEEKKVLEVSEELINELENIIECPRDYFSIEFTNSKYIMDG--KIVMPPTIIEVSWFDRGQEVQDKVALAITKYFKDE----------NKECVDVIFNNLKEER--YYENGKHF 108
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_106728913.1 (DUF1904 domain-containing protein [Zobellella sp. 59N8] >PSJ46296.1 DUF1904 domain-containing protein [Zobellella sp. 59N8]) HSP 1 Score: 72.4 bits (176), Expect = 1.900e-9 Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP LRF GVS V++++ L LA + + F E + + F+ H G + P +VE+ WF R ++QD+VA A+ +A+R R G E PDV +V ++E +YY+NG HF
Sbjct: 1 MPHLRFRGVSRETVKQLSKSLVDTLAPLAGSPREHFTLEFIPAEFV-HQGHVVAGYP-FVEVFWFERPLEVQDRVAAAITEALR-------ARVGDE---PDVAVVFTRLEGRNYYENGGHF 110
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_042476152.1 (DUF1904 domain-containing protein [Vibrio maritimus] >GAL21553.1 hypothetical protein JCM19235_1375 [Vibrio maritimus]) HSP 1 Score: 72.0 bits (175), Expect = 2.400e-9 Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP LRF + +V+ +++ L L ++ + F E + STF A Q P ++E+LWF RGQ+++D+VA + VR L +E DV ++ + +E + YY NG H+
Sbjct: 1 MPHLRFRALEQEMVKTLSSPLVDELQPLMDCPREDFTIEHISSTFFFDAQQSHAYP--FIEVLWFDRGQEVKDKVASVITNQVRSVLGKE----------RDVAVIFVALEPNSYYDNGNHY 110
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_087034821.1 (DUF1904 domain-containing protein [Oceanisphaera profunda] >ART81733.1 hypothetical protein CBP31_03080 [Oceanisphaera profunda]) HSP 1 Score: 72.0 bits (175), Expect = 2.400e-9 Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISH----AGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP LRF G+S A V+ ++ L LA +I + F E + + F+ +GQP+I E+LWF+R Q +QDQVA + +A+R L + D+ ++ +E H+YY+NG H+
Sbjct: 1 MPHLRFRGMSRATVKAISKTLVTTLAPVISSPENHFVVEFIPAEFVRDGQIMSGQPLI------EVLWFTRPQALQDQVATLITEAMRAYLEPD----------QDLCIIFTALEGHNYYENGQHY 110
BLAST of NO25G00100 vs. NCBI_GenBank
Match: WP_106453005.1 (DUF1904 domain-containing protein [Zobellella taiwanensis] >PSJ44638.1 DUF1904 domain-containing protein [Zobellella taiwanensis]) HSP 1 Score: 72.0 bits (175), Expect = 2.400e-9 Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 0
Query: 87 MPTLRFHGVSSALVQRVATQLSPVLASIIKVEPDLFRYESVESTFISHAGQPIIVPPVYVELLWFSRGQDIQDQVAVAVHKAVRDELAREGGREGGEGTLPDVILVGIQIEKHDYYKNGTHF 209
MP LRF GVS V+ ++ L LA + D F E + + F+ GQ + P+ VE+LWF R ++QD+VA A+ +A+R L E D+ +V ++E +YY+NG HF
Sbjct: 1 MPHLRFRGVSRDTVKHISKTLVDTLAPMTDSPKDDFTLEFIPAEFV-QLGQVVAGFPL-VEVLWFERPLEVQDRVAAAITEALRARLGEEA----------DITVVFTRLEGRNYYENGRHF 110 The following BLAST results are available for this feature:
BLAST of NO25G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00100 ID=NO25G00100|Name=NO25G00100|organism=Nannochloropsis oceanica|type=gene|length=1537bpback to top protein sequence of NO25G00100.1 >NO25G00100.1-protein ID=NO25G00100.1-protein|Name=NO25G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=209bpback to top Synonyms
Publications
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