NO25G00090, NO25G00090 (gene) Nannochloropsis oceanica

Overview
NameNO25G00090
Unique NameNO25G00090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1519
Alignment locationchr25:11091..12609 -

Link to JBrowse

Properties
Property NameValue
DescriptionSec14 cytosolic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:11091..12609 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036273CRAL/TRIO_N_dom_sf
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G00090.1NO25G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G00090.1NO25G00090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G00090 ID=NO25G00090|Name=NO25G00090|organism=Nannochloropsis oceanica|type=gene|length=1519bp
CGGAAAGGGGATATAGGCGTCGTTTCTTCTGCCAGAAGTATCCTCTGATC
AAATTCACTCGCCCGCATGCCGAACGTAAGAGTATTCCTCTTGCTTGTGT
TGCCCAAGCTTGCCTTACACGCCTCGCTCCCTCGGCACGTCGCACATACG
CGCCCCCTTTGCATTCGTTTGGAAAAGAATGACTGTCGTGGATTTGCATC
TTCCCAAAAAGTGCGCATCCTGACGTAGTCTCTCCCTCCAATCCTATGGA
TGGATGAATCCTTACGCCACTTGCTAAGTGACGGGCTCTGTCTCTGCTCA
CATTTGTGCCGTGCCGTCTCACTCTTCCTCCCTTCCCCCCCATTCAAACG
ACACAGAGATCTTTTCGACTCCCTTCGCTACCCATCGACACACAAGCCAT
CAACCGAACATGGGCTTCCTCTCATCCCCCAAAAGCAAGAAGGCGACCAT
CGACTCCCCCACCTCTAAAGCAGCGCCCGCCTCGCCCACTGTAATTGCAG
CCGAGGAAGACACGTTGGTTTCCCCTGCCTCCCCTATCAATGCCGTTGCT
ACGACACCTGTCAGgtagaacagggagggtggagggaaggagggagagag
aaatgctgcctgcgtggcgaaaagaggggggtgaatgaagccaaactgga
agagaggagggcgcgttcgtgtgatatgccaggtaccacgcgtcatcctt
ctcctctttctgtgcatgaataaaaagtacatttttaacatttggtctct
ccccttcatatgaccaccgttacgtcagCGGCGGAAAGGAGAGGACGCAT
GTCCGTTTCGAAGAGCCTGCCACGCCCTCCAGTGCAAATGCCTTGATGGg
tgcgtgtcctccctctctccttccctccctccctccctccctcccctttc
gattgtctactccctctcaacgaagtgttgtttctcacccttccttctct
cacacatacacctccccccttcaatcccagATGCAGCAGCGAGCCCCTCC
AAGAAAGGCCGTCCCTCTCTTAGGTCACAGACGAGCCTTGGAGGTCGCAT
TATGGCGTCTCTCTCGCGCACTTTGTCGGCCATGACCCCGCGGAGCAAGG
ACGAGGCCGgtgggtgacgacgaaggagaaagggagggagggagggaggg
aagggggagggggagagggagagggagagagggagggagagagggaggga
gaaggcggaagaggggaaatagcacatcaagaatgaaattccatgttcat
ccggacatacttccctttctccctccttccctctctcagGCTGGCGAGAT
GTGGACGTGCCCGAGCGTTTTCTCCTGGCCTGCGGCGGGAAGAAGAAGAA
GGCAGTGGGGATGTACAGGGCAATGCTGCGGTGGAGGAAAGAGAACGGCA
TTGGTGAGGAGGAGGGAGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGC
GAGCGAGCGAGCGAGCGAAGGAGACAGATAGAGAGGGGGGGAGGGGCGGA
AAGAGGGAGAATGTACTAA
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protein sequence of NO25G00090.1

>NO25G00090.1-protein ID=NO25G00090.1-protein|Name=NO25G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bp
MGFLSSPKSKKATIDSPTSKAAPASPTVIAAEEDTLVSPASPINAVATTP
VSGGKERTHVRFEEPATPSSANALMDAAASPSKKGRPSLRSQTSLGGRIM
ASLSRTLSAMTPRSKDEAGWRDVDVPERFLLACGGKKKKAVGMYRAMLRW
RKENGIGEEEGGGREIEREGGSERASERRRQIERGGGAERGRMY*
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Synonyms
Publications