NO25G00090.1, NO25G00090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G00090.1
Unique NameNO25G00090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length994
Alignment locationchr25:11091..12609 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:11091..12609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00090NO25G00090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G00090.1NO25G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G00090.1.cds1NO25G00090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00090.1.cds2NO25G00090.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00090.1.cds3NO25G00090.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00090.1.cds4NO25G00090.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G00090.1 ID=NO25G00090.1|Name=NO25G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=994bp
CGGAAAGGGGATATAGGCGTCGTTTCTTCTGCCAGAAGTATCCTCTGATC
AAATTCACTCGCCCGCATGCCGAACGTAAGAGTATTCCTCTTGCTTGTGT
TGCCCAAGCTTGCCTTACACGCCTCGCTCCCTCGGCACGTCGCACATACG
CGCCCCCTTTGCATTCGTTTGGAAAAGAATGACTGTCGTGGATTTGCATC
TTCCCAAAAAGTGCGCATCCTGACGTAGTCTCTCCCTCCAATCCTATGGA
TGGATGAATCCTTACGCCACTTGCTAAGTGACGGGCTCTGTCTCTGCTCA
CATTTGTGCCGTGCCGTCTCACTCTTCCTCCCTTCCCCCCCATTCAAACG
ACACAGAGATCTTTTCGACTCCCTTCGCTACCCATCGACACACAAGCCAT
CAACCGAACATGGGCTTCCTCTCATCCCCCAAAAGCAAGAAGGCGACCAT
CGACTCCCCCACCTCTAAAGCAGCGCCCGCCTCGCCCACTGTAATTGCAG
CCGAGGAAGACACGTTGGTTTCCCCTGCCTCCCCTATCAATGCCGTTGCT
ACGACACCTGTCAGCGGCGGAAAGGAGAGGACGCATGTCCGTTTCGAAGA
GCCTGCCACGCCCTCCAGTGCAAATGCCTTGATGGATGCAGCAGCGAGCC
CCTCCAAGAAAGGCCGTCCCTCTCTTAGGTCACAGACGAGCCTTGGAGGT
CGCATTATGGCGTCTCTCTCGCGCACTTTGTCGGCCATGACCCCGCGGAG
CAAGGACGAGGCCGGCTGGCGAGATGTGGACGTGCCCGAGCGTTTTCTCC
TGGCCTGCGGCGGGAAGAAGAAGAAGGCAGTGGGGATGTACAGGGCAATG
CTGCGGTGGAGGAAAGAGAACGGCATTGGTGAGGAGGAGGGAGGAGGGAG
GGAGATAGAGAGGGAGGGAGGGAGCGAGCGAGCGAGCGAGCGAAGGAGAC
AGATAGAGAGGGGGGGAGGGGCGGAAAGAGGGAGAATGTACTAA
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protein sequence of NO25G00090.1

>NO25G00090.1-protein ID=NO25G00090.1-protein|Name=NO25G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bp
MGFLSSPKSKKATIDSPTSKAAPASPTVIAAEEDTLVSPASPINAVATTP
VSGGKERTHVRFEEPATPSSANALMDAAASPSKKGRPSLRSQTSLGGRIM
ASLSRTLSAMTPRSKDEAGWRDVDVPERFLLACGGKKKKAVGMYRAMLRW
RKENGIGEEEGGGREIEREGGSERASERRRQIERGGGAERGRMY*
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mRNA from alignment at chr25:11091..12609-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G00090.1 ID=NO25G00090.1|Name=NO25G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1519bp|location=Sequence derived from alignment at chr25:11091..12609- (Nannochloropsis oceanica)
CGGAAAGGGGATATAGGCGTCGTTTCTTCTGCCAGAAGTATCCTCTGATC
AAATTCACTCGCCCGCATGCCGAACGTAAGAGTATTCCTCTTGCTTGTGT
TGCCCAAGCTTGCCTTACACGCCTCGCTCCCTCGGCACGTCGCACATACG
CGCCCCCTTTGCATTCGTTTGGAAAAGAATGACTGTCGTGGATTTGCATC
TTCCCAAAAAGTGCGCATCCTGACGTAGTCTCTCCCTCCAATCCTATGGA
TGGATGAATCCTTACGCCACTTGCTAAGTGACGGGCTCTGTCTCTGCTCA
CATTTGTGCCGTGCCGTCTCACTCTTCCTCCCTTCCCCCCCATTCAAACG
ACACAGAGATCTTTTCGACTCCCTTCGCTACCCATCGACACACAAGCCAT
CAACCGAACATGGGCTTCCTCTCATCCCCCAAAAGCAAGAAGGCGACCAT
CGACTCCCCCACCTCTAAAGCAGCGCCCGCCTCGCCCACTGTAATTGCAG
CCGAGGAAGACACGTTGGTTTCCCCTGCCTCCCCTATCAATGCCGTTGCT
ACGACACCTGTCAGGTAGAACAGGGAGGGTGGAGGGAAGGAGGGAGAGAG
AAATGCTGCCTGCGTGGCGAAAAGAGGGGGGTGAATGAAGCCAAACTGGA
AGAGAGGAGGGCGCGTTCGTGTGATATGCCAGGTACCACGCGTCATCCTT
CTCCTCTTTCTGTGCATGAATAAAAAGTACATTTTTAACATTTGGTCTCT
CCCCTTCATATGACCACCGTTACGTCAGCGGCGGAAAGGAGAGGACGCAT
GTCCGTTTCGAAGAGCCTGCCACGCCCTCCAGTGCAAATGCCTTGATGGG
TGCGTGTCCTCCCTCTCTCCTTCCCTCCCTCCCTCCCTCCCTCCCCTTTC
GATTGTCTACTCCCTCTCAACGAAGTGTTGTTTCTCACCCTTCCTTCTCT
CACACATACACCTCCCCCCTTCAATCCCAGATGCAGCAGCGAGCCCCTCC
AAGAAAGGCCGTCCCTCTCTTAGGTCACAGACGAGCCTTGGAGGTCGCAT
TATGGCGTCTCTCTCGCGCACTTTGTCGGCCATGACCCCGCGGAGCAAGG
ACGAGGCCGGTGGGTGACGACGAAGGAGAAAGGGAGGGAGGGAGGGAGGG
AAGGGGGAGGGGGAGAGGGAGAGGGAGAGAGGGAGGGAGAGAGGGAGGGA
GAAGGCGGAAGAGGGGAAATAGCACATCAAGAATGAAATTCCATGTTCAT
CCGGACATACTTCCCTTTCTCCCTCCTTCCCTCTCTCAGGCTGGCGAGAT
GTGGACGTGCCCGAGCGTTTTCTCCTGGCCTGCGGCGGGAAGAAGAAGAA
GGCAGTGGGGATGTACAGGGCAATGCTGCGGTGGAGGAAAGAGAACGGCA
TTGGTGAGGAGGAGGGAGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGC
GAGCGAGCGAGCGAGCGAAGGAGACAGATAGAGAGGGGGGGAGGGGCGGA
AAGAGGGAGAATGTACTAA
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Coding sequence (CDS) from alignment at chr25:11091..12609-

>NO25G00090.1 ID=NO25G00090.1|Name=NO25G00090.1|organism=Nannochloropsis oceanica|type=CDS|length=585bp|location=Sequence derived from alignment at chr25:11091..12609- (Nannochloropsis oceanica)
ATGGGCTTCCTCTCATCCCCCAAAAGCAAGAAGGCGACCATCGACTCCCC
CACCTCTAAAGCAGCGCCCGCCTCGCCCACTGTAATTGCAGCCGAGGAAG
ACACGTTGGTTTCCCCTGCCTCCCCTATCAATGCCGTTGCTACGACACCT
GTCAGCGGCGGAAAGGAGAGGACGCATGTCCGTTTCGAAGAGCCTGCCAC
GCCCTCCAGTGCAAATGCCTTGATGGATGCAGCAGCGAGCCCCTCCAAGA
AAGGCCGTCCCTCTCTTAGGTCACAGACGAGCCTTGGAGGTCGCATTATG
GCGTCTCTCTCGCGCACTTTGTCGGCCATGACCCCGCGGAGCAAGGACGA
GGCCGGCTGGCGAGATGTGGACGTGCCCGAGCGTTTTCTCCTGGCCTGCG
GCGGGAAGAAGAAGAAGGCAGTGGGGATGTACAGGGCAATGCTGCGGTGG
AGGAAAGAGAACGGCATTGGTGAGGAGGAGGGAGGAGGGAGGGAGATAGA
GAGGGAGGGAGGGAGCGAGCGAGCGAGCGAGCGAAGGAGACAGATAGAGA
GGGGGGGAGGGGCGGAAAGAGGGAGAATGTACTAA
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Synonyms
Publications