NO24G02480, NO24G02480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02480 vs. NCBI_GenBank
Match: EWM24460.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 458.0 bits (1177), Expect = 3.400e-125 Identity = 265/351 (75.50%), Postives = 293/351 (83.48%), Query Frame = 0 Query: 113 LEKERKLQTTIPMLGKIEAWEEARKQGAKEVLEIKP---------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIDAMYRDELDISAADGTNMRGYLVSSKMAQQFWRREERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGEDSTKEAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVASGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDSEEAPLQDALTLMDGFASHKALPYMVRVFKDCHSHFLTRPKQGEEGPAEDAVMLATSWLEIQLRRGKAKMIRDSRIV 455 +EKER+LQ +PML +EAWEEAR +GAKEV+EI P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIDAM+RDE+D++AADGT+MRGYLVSSKMAQ+FWRREERPVVLLL DERGWRSVQ RKLADHM+FL+NHVF VPDLYRG+V+ + +KEAWR AHPPIRLLQDARSAM LVRNYNATATGIVGFGVGGGQALSAVASG+IK+HAVVAM P GYDAPKVAEAL++TP LV+F GQD+ EAPLQ+ALTLMDGFASHKALPYMVRVFKDCH HFLTRP EE AEDA+MLATSWLEIQLRRGKAKMIRDSRI+ Sbjct: 1 MEKERRLQAAMPMLQTVEAWEEARMEGAKEVVEITPRLPRKPTARASEGKMKEKKKDGAGFKDEEGLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIDAMFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRPAPNEESAAEDAIMLATSWLEIQLRRGKAKMIRDSRIL 351
BLAST of NO24G02480 vs. NCBI_GenBank
Match: XP_005855775.1 (alpha beta-hydrolase domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU20579.1 alpha beta-hydrolase domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 295.4 bits (755), Expect = 3.000e-76 Identity = 146/197 (74.11%), Postives = 165/197 (83.76%), Query Frame = 0 Query: 206 MYRDELDISAADGTNMRGYLVSSKMAQQFWRREERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGEDSTKEAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVASGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDSEEAPLQDALTLMDGFASHKALPYM 403 M+RDE+D++AADGT+MRGYLVSSKMAQ+FWRREERPVVLLL DERGWRSVQ RKLADHM+FL+NHVF VPDLYRG+V+ + +KEAWR AHPPIRLLQDARSAM LVRNYNATAT G+IK+HAVVAM P GYDAPKVAEAL++TP LV+F GQD+ EAPLQ+ALTLMDGFASHKALPYM Sbjct: 1 MFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATAT------------------GFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYM 179
BLAST of NO24G02480 vs. NCBI_GenBank
Match: CBN78633.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.2 bits (313), Expect = 5.300e-25 Identity = 81/243 (33.33%), Postives = 126/243 (51.85%), Query Frame = 0 Query: 210 ELDISAADGTNMRGYLVSSKMAQQFW-----RREERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGEDSTKEA---WREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVASGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQD-SEEAPLQDALTLMDGFASHKALP-YMVRVFKDCHSHFLTRPKQGEEGPAEDAVMLATSWLEIQLRR 443 E + AD Y+VS+K A + W R E VV+LLTD G+ R AD +A + + + +VPD++R + + +E WR +H P+ + D R+ + + Y AT+ G+VGF GGG+AL A+G +K VV P+ YD +VA + P FA D A ++DA L + ++ +P + VR+ F RP + + AEDA++LATSWLE+ L++ Sbjct: 300 EEGLQPADVPRSDAYVVSTKKALRPWDGPHADRAETHVVVLLTDVFGYGDSFTRNAADEIAEVCDAIVVVPDMFRRRPWTHEQPEEEYEDWRSSHDPVAVANDIRACVDFARKEYKATSLGLVGFCYGGGRALEEAAAGVVKPDNVVVFYPTRYDVSEVASRV-TCPVAAFFAEHDVLPGATVEDACALREQLRDNEKVPDFQVRLCPGAGHGFAHRPTEKDTENAEDAMLLATSWLELYLQK 541
BLAST of NO24G02480 vs. NCBI_GenBank
Match: CEL99425.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 88.6 bits (218), Expect = 5.500e-14 Identity = 71/232 (30.60%), Postives = 111/232 (47.84%), Query Frame = 0 Query: 237 REERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGED---STKEAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQAL--------------SAVASGYIKS--HAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDS-EEAPLQDALTLMDGFASHKAL-PYMVRVFKDCHSHFL-------TRPKQGEEGPAEDAVMLATSWLEIQL 441 R+ R VL+LTD G+R MR++AD +A + VPDL+ G+ + D + EAWR H P R+ +++ L +Y +VGF GGG+AL +AV + VVA P+ YD + ++ PT V+A D+ A DA L + F +++ L +MV++F + F+ T Q E+ AE A +++TS+LE L Sbjct: 233 RDPRRAVLMLTDVFGYRDRFMRRVADRLADTLSLPVFVPDLFLGQPWSADRPPAEYEAWRSQHDPDRVDDTIGASLRFLKESYKMDVIAVVGFCYGGGRALETGVRYGGMEEAEGAAVCRNRVDKSVRCVVAFYPTRYDVEAIGRQMR-VPTCCVYAANDTLPGARKADAERLYEAFRANEDLFDFMVQIFDNTTHGFVHQSARDWTNDLQEEDQKAEKAYLISTSFLEFWL 463
BLAST of NO24G02480 vs. NCBI_GenBank
Match: XP_005716187.1 (unnamed protein product [Chondrus crispus] >CDF36368.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 81.3 bits (199), Expect = 8.800e-12 Identity = 70/241 (29.05%), Postives = 113/241 (46.89%), Query Frame = 0 Query: 209 DELDISAADGTNMRGYLVSSKMAQQFWRREERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVF--LVPDLYRGE--VYGEDSTK-EAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVA--SGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDSEEAPLQDALTLMDGFASHKAL-PYMVRVFKDCHSHFLTRP-KQGEEGPAEDAVMLATSWLEIQL 441 +EL + A+DG + +LV S+ R R V+L+TD G+ + + R +A L H F +VPDL+RG V G D ++ E+WR H P + D A L T+ G+VGF GGG+ + VA + + A VA P+ +D V A L+V G + P+ TL + ++ ++ + V V++ F P + ++ +E A A +WL+ L Sbjct: 9 EELQLHASDGATVAAFLVRSQP-----HRPSRTAVVLMTDILGYENHETRAVA---MLLAAHGFTTIVPDLFRGNPWVQGRDKSEYESWRRTHDPATVRGDILLARQALTERSLGTSLGLVGFCFGGGRLMEEVALNTSGLNPDAAVAFYPTRFDPEDVGR--NAHCPLLVQTGDRDDLVPVYVVNTLRETLQANASVKEWNVEVYEGFGHAFAHHPSSEADKAQSEVAFARALAWLKRHL 239
BLAST of NO24G02480 vs. NCBI_GenBank
Match: EWM24461.1 (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 75.9 bits (185), Expect = 3.700e-10 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0 Query: 1 MPDYPPDAPQHQIKKRHVGWDGALEGYTLADGSYVGVK 39 +PDYP D P+H+I KRHVGWDGALEGYTLADG+YVG+K Sbjct: 252 LPDYPTDLPRHKISKRHVGWDGALEGYTLADGTYVGIK 289
BLAST of NO24G02480 vs. NCBI_GenBank
Match: EEC83150.1 (hypothetical protein OsI_28358 [Oryza sativa Indica Group]) HSP 1 Score: 65.1 bits (157), Expect = 6.500e-7 Identity = 50/206 (24.27%), Postives = 87/206 (42.23%), Query Frame = 0 Query: 240 RPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGEDSTKEAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVASGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDSEEAPLQDALTLMDGFASH-KALPYMVRVFKDCHSHFLTRPKQG---EEGPAEDAVMLATSWLEIQLR 442 R +LL TD G+ + +RK+AD + L + +VPDL+ G+ Y D + W AH P++ +DA+ A L + + G+ G+ GG A+ + ++ A+V P+ A + E + + Q+ P + + + Y +VF+ + F R E AE A+ L W L+ Sbjct: 65 RRTILLATDIFGFEAPLLRKIADKVG-LAGYYVVVPDLFHGQPYTFDQNRTEWLSAHSPVKAAEDAKPIFAALSKE-GKSIVGVGGYCWGGKFAVEVAKTNEVE--AIVISHPAAVTADDMKEVKW---PIEILGAQNDTVTPPRSVYQFVHALRQRTDQIDYFAKVFQGVNHGFACRYNASNPFEVKKAEQALALMLDWFHKHLK 263
BLAST of NO24G02480 vs. NCBI_GenBank
Match: XP_015638979.1 (PREDICTED: endo-1,3;1,4-beta-D-glucanase [Oryza sativa Japonica Group] >AAT85138.1 putative dienelactone hydrolase [Oryza sativa Japonica Group] >AAU10810.1 putative endo-1,3;1,4-beta-D-glucanase [Oryza sativa Japonica Group] >BAF17393.1 Os05g0400100 [Oryza sativa Japonica Group] >BAG98081.1 unnamed protein product [Oryza sativa Japonica Group] >BAS93909.1 Os05g0400100 [Oryza sativa Japonica Group]) HSP 1 Score: 64.7 bits (156), Expect = 8.500e-7 Identity = 58/216 (26.85%), Postives = 99/216 (45.83%), Query Frame = 0 Query: 236 RREERPVVLLLTDERGWRSVQMRKLADHMAFLTNHVFLVPDLYRGEVYGEDSTK--EAWREAHPPIRLLQDARSAMACLVRNYNATATGIVGFGVGGGQALSAVASGYIKSHAVVAMSPSGYDAPKVAEALQATPTLVVFAGQDSEEAPLQDALTLMDGFASHKALPYMVRVFKDCHSHFLTR--------PKQGEEGPAEDAVMLATSWLEIQLR 442 RR V+L++D G+R+ ++RK+AD +A+ +VPDL G+ Y +D + E W + H P+ + + +A L ++ +T G+ G+ GG A+ S ++ AVV P+ V + + + + G+ +P Q L D +K + ++V++F D F R K EE A D V +LEI R Sbjct: 82 RRSGGRAVILVSDYYGFRAPKLRKIADKVAYQLGCYVVVPDLLFGDPYTDDPARPFEEWIKTHSPVEAAEKTKPLIAALKKDGTST-VGVGGYCWGGKVAVE--LSKTEETKAVVISHPA---LVVVDDMKEVKCPIEILGGELDTISPPQLIHQLEDALDQNKRVHHLVKIFPDAPHGFACRYNATDPFAVKTAEEARA-DMVKWFDKYLEIMKR 290 The following BLAST results are available for this feature:
BLAST of NO24G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02480 ID=NO24G02480|Name=NO24G02480|organism=Nannochloropsis oceanica|type=gene|length=3666bpback to top protein sequence of NO24G02480.2 >NO24G02480.2-protein ID=NO24G02480.2-protein|Name=NO24G02480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top protein sequence of NO24G02480.1 >NO24G02480.1-protein ID=NO24G02480.1-protein|Name=NO24G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=455bpback to top Synonyms
Publications
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