NO24G02350, NO24G02350 (gene) Nannochloropsis oceanica

Overview
NameNO24G02350
Unique NameNO24G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3598
Alignment locationchr24:639031..642628 -

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Properties
Property NameValue
DescriptionDNAJ heat shock N-terminal domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:639031..642628 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR001623DnaJ_domain
Homology
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: XP_005760738.1 (DnaJ, heat shock 40 kDa protein [Emiliania huxleyi CCMP1516] >EOD08309.1 DnaJ, heat shock 40 kDa protein [Emiliania huxleyi CCMP1516])

HSP 1 Score: 102.1 bits (253), Expect = 3.900e-18
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 0 
Query:  225 YEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVLGKLSV 336
            Y+ LGV   AS D IKKAYY+ AL +HPD+    D   + +FQ +SEAYQ+L+    RA YD  G    +   F+D  VFFTMLFGSERF PY+G L LA+A  + G +S+
Sbjct:  187 YDSLGVRYDASTDAIKKAYYKKALRLHPDKNPG-DEEAKEQFQAISEAYQVLADERSRAKYDAHGASGVE-KNFMDAGVFFTMLFGSERFEPYIGTLALATAASMEGGVSM 295
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BLAST of NO24G02350 vs. NCBI_GenBank
Match: XP_005767795.1 (DnaJ, heat shock 40 kDa protein [Emiliania huxleyi CCMP1516] >EOD15366.1 DnaJ, heat shock 40 kDa protein [Emiliania huxleyi CCMP1516])

HSP 1 Score: 102.1 bits (253), Expect = 3.900e-18
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 0 
Query:  225 YEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVLGKLSV 336
            Y+ LGV   AS D IKKAYY+ AL +HPD+    D   + +FQ +SEAYQ+L+    RA YD  G    +   F+D  VFFTMLFGSERF PY+G L LA+A  + G +S+
Sbjct:  187 YDSLGVRYDASTDAIKKAYYKKALRLHPDKNPG-DEEAKEQFQAISEAYQVLADERSRAKYDAHGASGVE-KNFMDAGVFFTMLFGSERFEPYIGTLALATAASMEGGVSM 295
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: KOO23181.1 (hypothetical protein Ctob_001803 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 0 
Query:  225 YEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVLGKLSVSGTEADLS 344
            Y++LGV   AS D IKKAYY+ AL +HPD+    D+     FQ++SEAYQ+L+   +R+ YD  G  A     ++D  +FFTMLFGSERF PY+GK      IG L   + +  E  LS
Sbjct:  213 YDLLGVRSDASTDEIKKAYYKRALKLHPDKNPG-DKTKAEEFQKVSEAYQVLADATMRSRYDSHG-AASLDVNWMDAGMFFTMLFGSERFEPYIGKRLDCPHIGKLALATAASMEGTLS 329
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: XP_008883588.1 (DnaJ domain-containing protein [Hammondia hammondi] >KEP66042.1 DnaJ domain-containing protein [Hammondia hammondi])

HSP 1 Score: 98.6 bits (244), Expect = 4.300e-17
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0 
Query:  223 SLYEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVL--------GKLSVSGTEADLSFADKEDEAQE 354
            S Y++L V   AS   IKKAYY+ AL  HPD+    D     +FQ++ EAYQ+L+ P  RA YDK G+ A Q+   ID  +FF MLFGSE+  P++GKL +A  + VL        G+   SGT+ + S   +E   +E
Sbjct:  191 SYYDLLEVTPDASAAQIKKAYYKLALKCHPDKNPG-DPEANIKFQKIGEAYQVLNDPKRRAQYDKHGLSATQNMKLIDPALFFMMLFGSEQLDPWIGKLKMAHLVEVLTQDETGFPGETDGSGTKPEESAKQREKMMKE 328
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: XP_002364542.1 (DnaJ domain-containing protein [Toxoplasma gondii ME49] >EPR60950.1 DnaJ domain-containing protein [Toxoplasma gondii GT1] >EPT25933.1 DnaJ domain-containing protein [Toxoplasma gondii ME49] >ESS35076.1 DnaJ domain-containing protein [Toxoplasma gondii VEG] >KFG37430.1 DnaJ domain-containing protein [Toxoplasma gondii GAB2-2007-GAL-DOM2] >KFG50042.1 DnaJ domain-containing protein [Toxoplasma gondii p89] >KFG56121.1 DnaJ domain-containing protein [Toxoplasma gondii FOU] >KFG66106.1 DnaJ domain-containing protein [Toxoplasma gondii RUB] >KFH09808.1 DnaJ domain-containing protein [Toxoplasma gondii VAND] >KFH17795.1 DnaJ domain-containing protein [Toxoplasma gondii MAS] >CEL77571.1 TPA: DnaJ domain-containing protein [Toxoplasma gondii VEG] >KYF48347.1 DnaJ domain-containing protein [Toxoplasma gondii ARI] >KYK65498.1 DnaJ domain-containing protein [Toxoplasma gondii TgCatPRC2])

HSP 1 Score: 98.2 bits (243), Expect = 5.600e-17
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0 
Query:  223 SLYEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVL--------GKLSVSGTEADLSFADKEDEAQE 354
            S Y++L V   AS   IKKAYY+ AL  HPD+    D     +FQ++ EAYQ+L+ P  RA YDK G+ A Q+   ID  +FF MLFGSE+  P++GKL +A  + VL        G+   SGT+ + S   +E   +E
Sbjct:  227 SYYDLLEVTPDASAAQIKKAYYKLALKCHPDKNPG-DPEANIKFQKIGEAYQVLNDPKRRAQYDKHGLSATQNMKLIDPALFFMMLFGSEQLDPWIGKLKMAHLVEVLTQDETGFPGESDGSGTKPEESAKQREKMMKE 364
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: PIM00574.1 (DnaJ domain-containing protein [Toxoplasma gondii COUG])

HSP 1 Score: 98.2 bits (243), Expect = 5.600e-17
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0 
Query:  223 SLYEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVL--------GKLSVSGTEADLSFADKEDEAQE 354
            S Y++L V   AS   IKKAYY+ AL  HPD+    D     +FQ++ EAYQ+L+ P  RA YDK G+ A Q+   ID  +FF MLFGSE+  P++GKL +A  + VL        G+   SGT+ + S   +E   +E
Sbjct:  227 SYYDLLEVTPDASAAQIKKAYYKLALKCHPDKNPG-DPEANIKFQKIGEAYQVLNDPKRRAQYDKHGLSATQNMKLIDPALFFMMLFGSEQLDPWIGKLKMAHLVEVLTQDETGFPGESDGSGTKPEESAKQREKMMKE 364
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: PUA91616.1 (DnaJ domain-containing protein, partial [Toxoplasma gondii TgCATBr9])

HSP 1 Score: 97.4 bits (241), Expect = 9.500e-17
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:  223 SLYEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVL 331
            S Y++L V   AS   IKKAYY+ AL  HPD+    D     +FQ++ EAYQ+L+ P  RA YDK G+ A Q+   ID  +FF MLFGSE+  P++GKL +A  + VL
Sbjct:  227 SYYDLLEVTPDASAAQIKKAYYKLALKCHPDKNPG-DPEANIKFQKIGEAYQVLNDPKRRAQYDKHGLSATQNMKLIDPALFFMMLFGSEQLDPWIGKLKMAHLVEVL 333
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: XP_002772941.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER04757.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0 
Query:  225 YEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHA-TFIDGDVFFTMLFGSERFRPYLGKLFLAS 326
            Y+ILGV   AS   IKKAYY+ A+ VHPD+   +D     +FQ LS+AYQ LS P+LR  YD +G++  Q +   +D  +FF +LFGSE+F P++G L LAS
Sbjct:  432 YDILGVKTNASKGEIKKAYYKKAMVVHPDK-NPNDPEAHKKFQELSQAYQCLSDPELRKKYDTQGLEGVQESVATLDPKLFFAVLFGSEKFLPFIGHLELAS 532
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: PFH34277.1 (DnaJ domain-containing protein [Besnoitia besnoiti])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 0 
Query:  223 SLYEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASAIGVLGKLSVSGTEADLSFADKEDEAQEGGREGRRERRMEE 367
            S Y++L V   AS   IKKAYY+ AL  HPD+    D   + +FQ++ EAYQ+L+ P  R  YDK GM A Q+   ID  +FF MLFGSE   P++GKL +A  + VL +    G    L   D+  EA+      +RE+ M+E
Sbjct:  272 SYYDVLEVSPEASSAQIKKAYYKLALKCHPDK-NPDDPEAKLKFQKIGEAYQVLNDPKRREQYDKYGMSATQNMNLIDPALFFMMLFGSEHLDPWIGKLKMAHLVEVLTQDEGGG----LFEMDENTEAKSDASTKQREKMMKE 410
[Close]
BLAST of NO24G02350 vs. NCBI_GenBank
Match: PRW20890.1 (heat shock 40 kDa [Chlorella sorokiniana])

HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16
Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 0 
Query:  225 YEILGVDRTASPDTIKKAYYRAALAVHPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFIDGDVFFTMLFGSERFRPYLGKLFLASA 327
            YE+LGVDR ASP+ +K+AYY  A  +HPD+    D   + +FQ+L EAYQ+L  P+LR  YD+ G  A     F+D   FF+ LFGS+RF   +G+L LA+A
Sbjct:  153 YELLGVDRGASPEEVKRAYYLLARRMHPDK-NPDDPEAKEKFQQLGEAYQVLGNPELRKRYDEHGAAALD-VNFVDAAEFFSALFGSDRFEHLVGELLLAAA 252
The following BLAST results are available for this feature:
BLAST of NO24G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005760738.13.900e-1849.55DnaJ, heat shock 40 kDa protein [Emiliania huxleyi... [more]
XP_005767795.13.900e-1849.55DnaJ, heat shock 40 kDa protein [Emiliania huxleyi... [more]
KOO23181.11.100e-1745.38hypothetical protein Ctob_001803 [Chrysochromulina... [more]
XP_008883588.14.300e-1741.73DnaJ domain-containing protein [Hammondia hammondi... [more]
XP_002364542.15.600e-1741.73DnaJ domain-containing protein [Toxoplasma gondii ... [more]
PIM00574.15.600e-1741.73DnaJ domain-containing protein [Toxoplasma gondii ... [more]
PUA91616.19.500e-1747.22DnaJ domain-containing protein, partial [Toxoplasm... [more]
XP_002772941.11.200e-1649.02conserved hypothetical protein [Perkinsus marinus ... [more]
PFH34277.11.200e-1641.67DnaJ domain-containing protein [Besnoitia besnoiti... [more]
PRW20890.11.600e-1648.04heat shock 40 kDa [Chlorella sorokiniana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR077ncniR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G02350.1NO24G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G02350.1NO24G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G02350 ID=NO24G02350|Name=NO24G02350|organism=Nannochloropsis oceanica|type=gene|length=3598bp
CTTCGAGTCGGCTGCAGAAAGGAGAGTGGTGACCGGCCTGTTTCTTACTA
TGTGGTAGTGTGTCGATGTGTTGTGGGGCGAGCCGCGTGGATAAGCGTGG
ATCTGGGGCGTTGTATGGAATGCAAGCAAGATACATGGCTCTGTGTGTTG
ATCACCAGGAGCTTGGGCTGAGGAAAATCAGCCTGTATCCCACACAAACA
CCAATCGATCCCCCCCCCACACGACAAGATGACATGATACGAAAGCCATC
GCCATGATTGGTGTCAAAGGAATAAAAGGCTGGCCGGACTAGTCACGCTG
ACGACTGATGATTATGAAGTGTATAATTCTTCCGGCGTTGGGGGGGGAAT
CATTGACGATTGTGGGATCGTGAGTGACTTTCCTTGTGCCTTATTTTCTT
ACTTGTTGGAAACCAAACACACGTGCTACTAGGCCAAGAGCCTTCCCAAC
TTTACAATTCAGTGACACAGAGCAAAACTCCCCCTGCGAGAAGGGGTTTC
TGGCCGCTTTCAATTCATAAGTGAGCCTCCAGAGCCCCAAGGATCGCCTG
TTCGCCGCGCCAGCGCAACACCTGCCGCAAAGCTGCCCACACGATTGATT
CAACTCAAGTTCCACTTCCACTTGTCCCCGTCCTGACCCACACCCACACC
CACGCCCATAGGAAGTTCGAGTTTTGGCAGGCACCTGTCTCGTACTGTGT
ACATGACTTTTTTGCCGCTGGCCAAGGTTAACTTTTGCTACGTCCGCCTT
CGCCCGATCATGTCCCGCTGCTGATGGCCATCCTCGAGCCACAGCCACCC
CAAAAAGGCACACAGAACCCATCCATTACAGCAACAGATTGCGGCATATG
TCCAACTTATCGTCGCTCGTGTCTAGCCAAATTGTCCTTTTTTCTACGCC
TTCTCCTCTGACCTTCGTTCTTCCCCTTCCACCCCCACCCCTAACCGACC
GTCCCATTGTACGTTGTACAGAGAGCGCGATGAACACCCCACCACCACTC
TATCCCTCGCCGAGGGGCTCCCCACCATCGATGTGGGACGCCGTGCTGCC
CGAGAACAAGACGATCCGCCGGGCTCGCTGGGGGGCTTGATGAGgtaagg
aaggagagggcggagggaaggcagggatagggaaaggacaagttgattat
gtacatttttaaaagaaagaaaaaaggtgtccatccatttactcacattg
ctgacctgcaccctcctctcccatgtagATCTGCCTCCACATCCTCCCCT
TCAGTGTCTCTTGGAGGCGCTCGTCTTCCCCCTTCGCCCTCCTCCGCCCT
CGCCCTCTCCCGGAGTAGCAGCAGCAGCAGCATGGGCAACCAGAGCACCG
GTAAGGGCGGAAATAGCCTTGTAACTTGGGCTCATTCCTCCTCGCGGTCA
CTTTTGAATCATTCGGCGCGgtaaggaaggagggagggagggagggaggg
aaggaaggaaggagggagggatgatgggaacgcggagtaactgtgccacc
tctcgatcctaaaaagctcaacttccttccctcctttcctcccttcctcc
cacccttcttctctctagAGATGCGATGGGTGGGCTCTCAGGCGGGATGA
CTTCGGTAGTTGGCGGATTCGGTCTCGGCCTGGCATCCCTCGTCGCCGCC
CCGACCATCGGTGCGCAGCAATACGgtacgttgtttcctccctccctccc
tccctccctccctctctctctccctcccttaatatacaaggcgagcaagc
gatagacatctgtccaaatcgcctacctccctccttccatccctcccgct
cccgtttccttgtgcattgcctccctatttacagacatgaaaaaatacac
ccatgagtaaaggaggtgtatctgtatacatacagttcttgcattttttc
ttcaggcgtgaagtatttcacctgctctcagcgctaaccctccttcccac
tccctccctccctctctccctccctccctctctctctccccctccctccc
cctctccctccctccccctcttcctccctccctccctccctcccttctta
gGCGTGAAGGGCTTCCTCGCCGGCCTCGGTGCGGGGCTAGCGGGCTGCGT
GGTGCTGCCAGTGGGGGGTGGTGGGTGGCGTCTCCTACATCATAGgtagg
tgaggagggaaggagggagggagggagggaaggaaagagggaagaagtct
ccccacatcatatgcttattcttgcctcatgcgcaccctccctccctagG
CGGCGTGGTGAATACTCCCACCTCTGTCCTTCAAATGTCTCGAGGTCGCG
TCTGGGACTCGCTTTTGCAAAAATGGGTCAAgtgcgttgctccctccctc
cctccctccctccctccccctccctccctccctccctcccctcttcctta
ctacttcaatcgtgctgaacctcctcctcccctttctccctctttccgtc
cttccctagATACGATTTGAAGGAGGAGGCTGCGCGTGTCCTGGACGGCA
AGGAGGAAGAGGACGAGGACGAGACAGCGGCAACAACAACTGCAGCAGCA
ACAGCATCTACAGAAGAAAGTGGAGGGGAGGGCAAGGACGAAAGAAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGAGGGGAGGAGGAAGCACGGTCGCT
CTACGAGATTTTGGGGGTGGATCGAACGGCCTCGCCCGACACCATCAAAA
AGGCCTACTACAGGgtaggaaagggagggagggagggagggagggaggga
gggaggaagaagaaaagaaacgtgctagaatagctcatgggttacctccc
tccctccctccctccctccctccctccctccctgcagGCCGCTCTGGCAG
TGCATCCAGATCGGGTAGTGGCCCACGACCGTTACACCCAAGGCCGTTTC
CAACGGCTCTCGGAGGCCTACCAGATTCTCTCCACCCCCGATCTCAGGGC
CGCCTACGACAAGGAAGGAATGAAGgtagggaccctccctccctccctcc
ctccctccctatcgacctatacgaggcgtttcactcaaactgcgtgtgat
atcgtgcatgtatcacctgaattcggactctttgctttccctccctccct
ccctccttccttccctcccttcataccctgtagtcctccctccctccctc
cctccctcactccctcaaataattccttaccctctcctccctccctccct
ctctccccccttccctccctccagGCCTGCCAGCACGCCACCTTCATCGA
CGGCGACGTCTTCTTTACCATGCTCTTTGGCTCCGAGCGCTTTCGGCCTT
ATCTGGGAAAACTTTTTTTAGCCTCCGCCATTGgtacttttccctccctc
ccttcctccctaccttactccctctcttgtttgttttttcgctctgacct
cttttcctgttttattcacccgataaagacattaaactcgccttccctcc
ctccctccctccctccctccctccctcagGCGTTCTGGGGAAGCTCAGTG
TCAGTGGCACCGAAGCCGACCTGTCGTTTGCAGACAAGGAGGACGAGGCC
CAGGAAGGGGGGAGGGAGGGGAGGAGGGAAAGAAGGATGGAGGAGTAA
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protein sequence of NO24G02350.1

>NO24G02350.1-protein ID=NO24G02350.1-protein|Name=NO24G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MRSASTSSPSVSLGGARLPPSPSSALALSRSSSSSSMGNQSTGKGGNSLV
TWAHSSSRSLLNHSARDAMGGLSGGMTSVVGGFGLGLASLVAAPTIGAQQ
YGVKGFLAGLGAGLAGCVVLPVGGGGWRLLHHRRRGEYSHLCPSNVSRSR
LGLAFAKMGQIRFEGGGCACPGRQGGRGRGRDSGNNNCSSNSIYRRKWRG
GQGRKKGGREGGREGGGEEEARSLYEILGVDRTASPDTIKKAYYRAALAV
HPDRVVAHDRYTQGRFQRLSEAYQILSTPDLRAAYDKEGMKACQHATFID
GDVFFTMLFGSERFRPYLGKLFLASAIGVLGKLSVSGTEADLSFADKEDE
AQEGGREGRRERRMEE*
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Synonyms
Publications