NO24G02170, NO24G02170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02170 vs. NCBI_GenBank
Match: CBJ30143.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 170.6 bits (431), Expect = 9.600e-39 Identity = 105/293 (35.84%), Postives = 155/293 (52.90%), Query Frame = 0 Query: 10 LAFAILEHL---QGSVAGEG---VEEALATLSTALGVDLSSGNDMSAYSYKPATLPQIFSKGAEALNLSTVGAEMAALNSDPLFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEK-------------------------------------QAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAKI 260 + ++LEHL +G + E V A+++LS+A G++L + S KP TL IF G AL + G ++A L S F Q++ ++ KG+FKG+EEGS+ Y +R K KFK + +KGEGN+ +L+KDY AE Y+EA+ L+P+G +SHVY CNRAAA +LG + AV D ++A +LNP+Y+KAY+RLGYA F L+ Y A AY +++E++P NAAN + L +A AK+ Sbjct: 1 MMLSVLEHLASAEGDLPSESRTHVASAISSLSSAFGLNLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAFFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 293
BLAST of NO24G02170 vs. NCBI_GenBank
Match: POM58024.1 (Hsc70 cochaperone, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 144.1 bits (362), Expect = 9.600e-31 Identity = 89/242 (36.78%), Postives = 135/242 (55.79%), Query Frame = 0 Query: 25 EGVEEALATLSTALGVDLSSGNDMSAYSYK-PATLPQIFSKGAEALNLSTVGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAK 259 + V+ AL L+ A GVD+ + A+ +IF+ G +AL L T AE +A++ DP L+++++AK+ KGFFK G+ Y R KA KFKEK +A+AE +K +GN A+ +DY A +LY EA+ L+ G SSH+Y+ N AAA +LG + + E++ L P+Y KAYSR+G A L+ + A D Y R +E+D +NAA ++ L+ A+ K Sbjct: 28 QDVDAALVRLTEAFGVDVHDAEQKRQLAVNGEASFDEIFAAGLKALKLETGTAETSAVDEDPVVKKHPELWKKWVAKLETKGFFKDAAPGTSEYATRTNKALAKFKEKFGDVKPELSKEEKEAKAEEVKAQGNAALSRQDYEGASKLYREALKLSADGPSSHIYHSNLAAALMYLGKYSEVIDHCEQSIALKPSYVKAYSRMGSAQVQLKDFDGAIDTYRRGLEVDSTNAACRDGLADAERK 269
BLAST of NO24G02170 vs. NCBI_GenBank
Match: POM73472.1 (Hsc70 cochaperone [Phytophthora palmivora var. palmivora]) HSP 1 Score: 143.3 bits (360), Expect = 1.600e-30 Identity = 89/242 (36.78%), Postives = 135/242 (55.79%), Query Frame = 0 Query: 25 EGVEEALATLSTALGVDLSSGNDMSAYSYK-PATLPQIFSKGAEALNLSTVGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAK 259 + V+ ALA L+ A GVD+ + A+ +IF+ G +AL L T AE + ++ DP L+++++AK+ KGFFK G+ Y R KA KFKEK +A+AE +K +GN A+ +DY A +LY EA+ L+ G SSH+Y+ N AAA +LG + + E++ L P+Y KAYSR+G A L+ + A D Y R +E+D +NAA ++ L+ A+ K Sbjct: 28 QDVDAALARLTEAFGVDVHDAEQKRQLAVNGEASFDEIFAAGLKALKLETGTAETSEVDEDPVVKKHPELWKKWVAKLETKGFFKDAAPGTSEYATRTNKALAKFKEKFGDVKPELSKEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALKLSADGPSSHIYHSNLAAALMYLGKYSEVIDHCEQSIALKPSYVKAYSRMGSAQVQLKDFDGAIDTYRRGLEVDSTNAACRDGLADAERK 269
BLAST of NO24G02170 vs. NCBI_GenBank
Match: OWZ15253.1 (hypothetical protein PHMEG_00011147 [Phytophthora megakarya]) HSP 1 Score: 141.0 bits (354), Expect = 8.100e-30 Identity = 91/248 (36.69%), Postives = 134/248 (54.03%), Query Frame = 0 Query: 22 VAGEGVEEALATLSTALGVDLSSGNDMSAYSYK-PATLPQIFSKGAEALNLSTVGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAKIAE 262 V + V+ AL+ L+ A GVD+ A+ +IF+ G +AL+L T AE A+ DP L+++++AK+ KGFFK G+ Y R KA KFKEK +A+AE +K +GN A+ +DY A LY EA+ L+ G SSH+Y+ N AAA +LG + + E++ L PAY KAYSR+G A L+ + A D + R +E+D SN A ++ L+ A+ K E Sbjct: 25 VDSQDVDAALSRLTEAFGVDVHDAEQKRQLIVNGEASFDEIFAAGLKALSLETGTAEKCAVEEDPVVQKHPELWKKWVAKLESKGFFKDAAPGTSEYTTRTNKALAKFKEKFGDVKPELSKEEKEAKAEEVKAQGNAALSRQDYDGAATLYREALKLSTDGPSSHIYHSNLAAALMYLGKYTEVIDHCEQSIALKPAYVKAYSRMGSAQVQLKDFDGAIDTFRRGLEVDSSNDACRDGLADAERKRRE 272
BLAST of NO24G02170 vs. NCBI_GenBank
Match: GAX94117.1 (Hypothetical protein PINS_002017 [Pythium insidiosum]) HSP 1 Score: 141.0 bits (354), Expect = 8.100e-30 Identity = 87/228 (38.16%), Postives = 130/228 (57.02%), Query Frame = 0 Query: 21 SVAGEGVEEALATLSTALGVDLSSGNDMSAYSYK-PATLPQIFSKGAEALNLSTVGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPS---PADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTR 238 +V E +E L L+ A G+DL +AY A+ P+IF+ G +AL LS G +A + DP L+++++AK+ +KGFF G + GS Y R KA K+KEK PS +A+AE +K +GN A+ DY +A +LYSEA+ L+ G +SH+YY N AAA +LG + + + EKA L P+Y KAYSR+G A +L+ + A +++ R Sbjct: 24 NVDTENIEVGLQCLTVAFGLDLQDAQQKNAYEIAGAASFPEIFAAGMKALGLSAKG-HVATVEDDPVIAKNPDLWKKWVAKLEDKGFFNGADVGSVEYQTRIKKALAKYKEKFGDVKPAAPSMTKAEKEAKAEEIKAKGNSALNGGDYEQAAKLYSEALQLSSDGPNSHIYYANYAAALMYLGRYSEVIDNCEKAIALKPSYVKAYSRMGNAQIHLKDFDGAIESFRR 250
BLAST of NO24G02170 vs. NCBI_GenBank
Match: XP_009822167.1 (hypothetical protein H257_00930 [Aphanomyces astaci] >ETV87304.1 hypothetical protein H257_00930 [Aphanomyces astaci]) HSP 1 Score: 138.3 bits (347), Expect = 5.300e-29 Identity = 96/229 (41.92%), Postives = 134/229 (58.52%), Query Frame = 0 Query: 1 MSGVDE-EKTLAFAILEHLQGSVAGEGVEEA-----LATLSTALGVDLSSGNDMSAYSYKPATLPQIFSKGAEALNLSTVGAEMA---ALNSDP-LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPS---PADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYS 217 M G+ E EK L F++LE L +GV+ A + +L A V+ S K +L IF+ G+++L L T+ A A + ++P L+Q++LAK+ KGFF G+ G+ Y D + KA KFKEK +D PS +A+AE+LK GN A+ +KDY KAEQLYSEAIAL+P G +SH+Y N AAA+ +L + V + EK+ ELNP Y KAYS Sbjct: 1 MGGITEAEKVLLFSVLEFLAPLSGKDGVDAAKVQAGVKSLQEAFNVNPSDAALKQRLGLKNHSLLDIFTAGSKSLQLVTLSAPAAEDPVIAANPGLWQKWLAKLEAKGFFNGVSPGTSEYDDLYKKALSKFKEKFG-SDKAPPSLSKEEKEAKAETLKASGNAALSAKDYVKAEQLYSEAIALSPAGPNSHIYLSNLAAAQMYLEKYDDVVDNCEKSIELNPKYVKAYS 228
BLAST of NO24G02170 vs. NCBI_GenBank
Match: XP_002909471.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58285.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 138.3 bits (347), Expect = 5.300e-29 Identity = 91/247 (36.84%), Postives = 133/247 (53.85%), Query Frame = 0 Query: 22 VAGEGVEEALATLSTALGVDLSSGNDMSAYSYKPAT-LPQIFSKGAEALNLST--VGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAK 259 V + V+ AL +L+ A G+++ + T +IF+ G +ALNL T G + + DP L++++LAK+ KGFFK GS Y R KA KFKEK +A+AE +K +GN A+ +DY A +LY EA+ L+ G SSH+Y+ N AAA +LG H + E + L P+Y KAYSR+G A LQ + A D Y R +E+D +NAA ++ L+ A+ K Sbjct: 25 VNSQQVDAALTSLTEAFGMNVHDAEQKRQLAVNGDTSFDEIFAAGLKALNLETGAPGETKSMADEDPVVKKHPELWKKWLAKLESKGFFKDAAPGSGEYATRTNKALAKFKEKFGDVKPDLYKEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKHTEVIDHCEHSIALQPSYVKAYSRMGSAQVQLQDFDGAIDTYRRGLEVDSTNAACRDGLADAERK 271
BLAST of NO24G02170 vs. NCBI_GenBank
Match: ETI50718.1 (hypothetical protein F443_05846 [Phytophthora parasitica P1569] >ETK90539.1 hypothetical protein L915_05713 [Phytophthora parasitica] >ETL43949.1 hypothetical protein L916_05650 [Phytophthora parasitica] >ETL97149.1 hypothetical protein L917_05536 [Phytophthora parasitica] >ETM50305.1 hypothetical protein L914_05653 [Phytophthora parasitica] >ETO79395.1 hypothetical protein F444_05894 [Phytophthora parasitica P1976] >ETP20493.1 hypothetical protein F441_05851 [Phytophthora parasitica CJ01A1] >ETP48384.1 hypothetical protein F442_05889 [Phytophthora parasitica P10297] >KUF78037.1 Small glutamine-rich tetratricopeptide repeat-containing protein 2 [Phytophthora nicotianae] >KUF98265.1 NEDD8-activating enzyme E1 catalytic subunit [Phytophthora nicotianae]) HSP 1 Score: 136.3 bits (342), Expect = 2.000e-28 Identity = 87/247 (35.22%), Postives = 136/247 (55.06%), Query Frame = 0 Query: 22 VAGEGVEEALATLSTALGVDLSSGNDMSAYSYK-PATLPQIFSKGAEALNL--STVGAEMAALNSDP-------LFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAK 259 V + V+ AL +L+ A GV++ + A+ +IF+ G +ALNL T G + + DP L+++++AK+ KGFFK GS + R KA KFKEK +A+AE +K +GN A+ +DY A +LY EA+ L+ G SSH+Y+ N AAA +LG + + E++ L P+Y KAYSR+G A L+ + A D + R +E+D +NAA ++ L++A+ K Sbjct: 25 VNSQQVDSALTSLTEAFGVNVHDAEQKRQLAVNGEASFDEIFAAGLKALNLETGTTGEAKSMADEDPVVKKHPELWKKWVAKLESKGFFKDAAPGSSEHATRTNKALAKFKEKFGDVKPELSKEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKYTEVIDHCEQSIALKPSYVKAYSRMGSAQVQLKDFDGAIDTFRRGLEVDSTNAACRDGLAEAERK 271
BLAST of NO24G02170 vs. NCBI_GenBank
Match: XP_024575432.1 (TPR repeat-containing protein [Plasmopara halstedii] >CEG39063.1 TPR repeat-containing protein [Plasmopara halstedii]) HSP 1 Score: 136.0 bits (341), Expect = 2.600e-28 Identity = 91/257 (35.41%), Postives = 137/257 (53.31%), Query Frame = 0 Query: 10 LAFAILEHLQGSVAGEGVEEALATLSTALGVDLSSGNDMSAYSY-KPATLPQIFSKGAEALNLSTVGAEMAALNSD---------PLFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQ 257 LA+ G V E V+EAL L+ A GV++ + ++F+ G +AL+L T + A +D L+++++AK+ KGFFK GS Y+ R KA KFKEK + +AE K +GN A+ +DY A +LY EA+ L+P G SSH+Y+ N AAA ++G + + E++ L P+Y KAYSRLG A L+ Y A DAY R +E+D +NAA ++ L++A+ Sbjct: 16 LAYIDALKTHGGVGTEQVDEALIRLTEAFGVNIHDAEQKRQLAINSDIPFDEVFAAGLKALSLETGMPDEAKSMADEDPVVKMHPELWKKWVAKLDSKGFFKDATPGSTDYVMRLNKALLKFKEKFGDVKPVLTIEEKELKAEEAKTQGNAALSRQDYEGAAKLYREALQLSPHGPSSHIYHSNLAAALMYMGKYSEVIDHCEQSIALKPSYVKAYSRLGSAQVQLRDYDGAIDAYRRGLEVDSTNAACRDGLAEAE 272
BLAST of NO24G02170 vs. NCBI_GenBank
Match: ORC90796.1 (small glutamine-rich tetratricopeptide repeat protein [Trypanosoma theileri]) HSP 1 Score: 135.2 bits (339), Expect = 4.500e-28 Identity = 94/261 (36.02%), Postives = 141/261 (54.02%), Query Frame = 0 Query: 4 VDEEKTLAFAILEHL--QGSVAGEGVEEALATLSTALGVD---LSSGNDMSAYSYKPATLPQIFSKGAEALNLSTVGAEMAALNSDPLFQQYLAKITEKGFFKGLEEGSKAYLDRFLKAAGKFKEKQAQADGTKPSPADQARAESLKGEGNQAILSKDYHKAEQLYSEAIALAPTGVSSHVYYCNRAAARSHLGDHMGAVADAEKATELNPAYSKAYSRLGYAHFYLQHYPEARDAYTRAVELDPSNAANKEYLSKAQAKI 260 ++ +K L FA + HL Q S E V+ + LS GVD + ND L Q F AL GA + F +L + +KG+F G+E+GS+ Y R KA KF++++ +P + AE +K +GN+ + Y++A Y++AI + P S+HV++ NRAAA +HL D+ A+ D E+A +NP YSKAYSRLG + FY +Y A DA+T+A EL+P+N KE L +A+ K+ Sbjct: 1 METQKKLIFAFIRHLRRQPSTTPERVDAIVELLSEEYGVDPAGVGGANDTG------IDLLQAFE---TALQQQASGAN---AEDEEKFNAFLQLLEKKGYFAGVEQGSEEYASRLEKARQKFEKRR--------NPYEGLSAEEIKDKGNELMGMAKYNEAIAAYTKAIEIEP---SNHVFFANRAAAHTHLKDYRSAILDCERAIAINPNYSKAYSRLGTSFFYEGNYARAVDAFTKACELEPTNERYKEDLKQAEEKM 238 The following BLAST results are available for this feature:
BLAST of NO24G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02170 ID=NO24G02170|Name=NO24G02170|organism=Nannochloropsis oceanica|type=gene|length=3748bpback to top protein sequence of NO24G02170.2 >NO24G02170.2-protein ID=NO24G02170.2-protein|Name=NO24G02170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=349bpback to top protein sequence of NO24G02170.1 >NO24G02170.1-protein ID=NO24G02170.1-protein|Name=NO24G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bpback to top Synonyms
Publications
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