NO24G02140, NO24G02140 (gene) Nannochloropsis oceanica

Overview
NameNO24G02140
Unique NameNO24G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3389
Alignment locationchr24:571065..574453 +

Link to JBrowse

Properties
Property NameValue
DescriptionSplicing factor, arginine/serine-rich 1/9
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:571065..574453 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
Homology
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: EWM24426.1 (asf sf2-like pre-mrna splicing factor srp31, partial [Nannochloropsis gaditana])

HSP 1 Score: 200.3 bits (508), Expect = 6.800e-48
Identity = 104/117 (88.89%), Postives = 108/117 (92.31%), Query Frame = 0 
Query:    1 MSCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRRRDGGFGXXXXXXXSRTDFRLEVTDLPDRTSWQDLK 118
            MSCRIYVGNLPMDVRER+LDDLFYKYGRIRGIDIKRP+RPPAYAFVAFEDPRDAKDAV+YRDNYDFDGGRIRVELANE PRR      XXXXXXX  TDFRLEV+DLPDRTSWQDLK
Sbjct:    1 MSCRIYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNYDFDGGRIRVELANETPRR---XXXXXXXXXXXXTDFRLEVSDLPDRTSWQDLK 114
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_008874895.1 (hypothetical protein H310_10326 [Aphanomyces invadans] >ETV96632.1 hypothetical protein H310_10326 [Aphanomyces invadans])

HSP 1 Score: 189.5 bits (480), Expect = 1.200e-44
Identity = 92/175 (52.57%), Postives = 122/175 (69.71%), Query Frame = 0 
Query:    1 MSCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRRRD----GGFGXXXXXXXSRTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDGEGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            M  R+YVGNLPMDVR RELDDLFYKYGRI  IDIK+P+RPPA+AF+ F+ PRDA+DA+  RD Y+FDG R+RVE  N   RR D     GFG           + ++VT LP+  +WQD+KD+F+ +G+V++A V++ G G +EF+N++DM  A  KLD T FK   D+  IRV+
Sbjct:    1 MCTRVYVGNLPMDVRTRELDDLFYKYGRILDIDIKQPSRPPAFAFIEFDHPRDAEDAIRGRDGYEFDGQRLRVERTNGGGRRSDRGDSKGFGRNLMGSGK---YSVDVTGLPESAAWQDVKDFFRKIGDVIFARVDKKGGGFIEFSNREDMLRAVSKLDDTEFKTRTDTTVIRVK 172
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_020152975.1 (serine/arginine-rich-splicing factor SR34 isoform X1 [Aegilops tauschii subsp. tauschii] >XP_020152976.1 serine/arginine-rich-splicing factor SR34 isoform X1 [Aegilops tauschii subsp. tauschii] >XP_020152977.1 serine/arginine-rich-splicing factor SR34 isoform X1 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 186.8 bits (473), Expect = 7.800e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R++FR+ V  LP   SWQDLKD+ +  G+V ++DV R+G    GVV++ N DDM  A RKLD T F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_020152979.1 (serine/arginine-rich-splicing factor SR34 isoform X2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 186.8 bits (473), Expect = 7.800e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R++FR+ V  LP   SWQDLKD+ +  G+V ++DV R+G    GVV++ N DDM  A RKLD T F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_020152980.1 (serine/arginine-rich-splicing factor SR34 isoform X3 [Aegilops tauschii subsp. tauschii] >XP_020152981.1 serine/arginine-rich-splicing factor SR34 isoform X3 [Aegilops tauschii subsp. tauschii] >XP_020152982.1 serine/arginine-rich-splicing factor SR34 isoform X3 [Aegilops tauschii subsp. tauschii] >XP_020152983.1 serine/arginine-rich-splicing factor SR34 isoform X3 [Aegilops tauschii subsp. tauschii] >XP_020152984.1 serine/arginine-rich-splicing factor SR34 isoform X3 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 186.8 bits (473), Expect = 7.800e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R++FR+ V  LP   SWQDLKD+ +  G+V ++DV R+G    GVV++ N DDM  A RKLD T F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_020152987.1 (serine/arginine-rich-splicing factor SR34 isoform X5 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 186.8 bits (473), Expect = 7.800e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R++FR+ V  LP   SWQDLKD+ +  G+V ++DV R+G    GVV++ N DDM  A RKLD T F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_020152985.1 (serine/arginine-rich-splicing factor SR34 isoform X4 [Aegilops tauschii subsp. tauschii] >XP_020152986.1 serine/arginine-rich-splicing factor SR34 isoform X4 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 186.8 bits (473), Expect = 7.800e-44
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R++FR+ V  LP   SWQDLKD+ +  G+V ++DV R+G    GVV++ N DDM  A RKLD T F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: BAJ85975.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 186.0 bits (471), Expect = 1.300e-43
Identity = 97/179 (54.19%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELANEAPRR-----RDGGFGXXXXXXXS-RTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA DA+Y RD YDFDG R+RVELA+    +     R   F        S R+++R+ V  LP   SWQDLKD+ +  G+V ++DV R+     G+V++ N DDM  A RKLDGT F+N F    IRVR
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGKAQSYSYDRPSSFSSGRRGGVSRRSEYRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRAYIRVR 184
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_005839201.1 (hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta CCMP2712] >EKX52221.1 hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta CCMP2712])

HSP 1 Score: 184.9 bits (468), Expect = 3.000e-43
Identity = 92/174 (52.87%), Postives = 123/174 (70.69%), Query Frame = 0 
Query:    5 IYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELA-NEAPRRRDGGFGXXXXXXXSRTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNR---DGEGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVRLPK 175
            IYVGNLP+D+R R+++DLFYKYGRIR I++K PNRPPA+AFV+FED RDA+DA+  RD   F+G R+R E++    PR    G          R+D+R+ V++LP   SWQDLKD+F+ VGEV+Y DV+R      G+VEFA++ +  AA ++LD T FKNPFD   IRV+ PK
Sbjct:    1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGISFEGARLRCEMSRGNGPR----GSRQQPRRDLRRSDYRVIVSNLPPSASWQDLKDHFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEFKNPFDKVYIRVKAPK 170
[Close]
BLAST of NO24G02140 vs. NCBI_GenBank
Match: XP_006654309.1 (PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X4 [Oryza brachyantha])

HSP 1 Score: 184.5 bits (467), Expect = 3.900e-43
Identity = 94/177 (53.11%), Postives = 119/177 (67.23%), Query Frame = 0 
Query:    2 SCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFEDPRDAKDAVYYRDNYDFDGGRIRVELAN--EAPR--RRDGGFGXXXXXXXSRTDFRLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDG---EGVVEFANKDDMFAAKRKLDGTVFKNPFDSREIRVR 172
            SC IYVGNLP D+RERE++DLFYKYGRI  ID+K P RPP YAFV FEDPRDA+DA++ RD YDFDG R+RVELA+    P   R              RTD+R+ VT LP   SWQDLKD+ +  G+V ++DV R+G    G+V++ N +DM  A RKLD + F+N F    +RV+
Sbjct:    6 SCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIHGRDAYDFDGHRLRVELAHGGRGPSFDRSSNNSSAGRRGASRRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYVRVK 182
The following BLAST results are available for this feature:
BLAST of NO24G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24426.16.800e-4888.89asf sf2-like pre-mrna splicing factor srp31, parti... [more]
XP_008874895.11.200e-4452.57hypothetical protein H310_10326 [Aphanomyces invad... [more]
XP_020152975.17.800e-4455.31serine/arginine-rich-splicing factor SR34 isoform ... [more]
XP_020152979.17.800e-4455.31serine/arginine-rich-splicing factor SR34 isoform ... [more]
XP_020152980.17.800e-4455.31serine/arginine-rich-splicing factor SR34 isoform ... [more]
XP_020152987.17.800e-4455.31serine/arginine-rich-splicing factor SR34 isoform ... [more]
XP_020152985.17.800e-4455.31serine/arginine-rich-splicing factor SR34 isoform ... [more]
BAJ85975.11.300e-4354.19predicted protein [Hordeum vulgare subsp. vulgare][more]
XP_005839201.13.000e-4352.87hypothetical protein GUITHDRAFT_41825, partial [Gu... [more]
XP_006654309.13.900e-4353.11PREDICTED: serine/arginine-rich-splicing factor SR... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G02140.1NO24G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598777gene_7440Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101218g3gene6054Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G02140.1NO24G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G02140 ID=NO24G02140|Name=NO24G02140|organism=Nannochloropsis oceanica|type=gene|length=3389bp
TTTATTTTCTTGAACTATCCCTTACTCTCGGCATGGAGATATGCTTCCCT
TGGCAAGAATCAACTCAGCTGAATTTGGGGGAGGAGGGGAATCAAATTGA
AGGATGAGAAGTACTCTCTTGGAAAGTCATGCAGAGAAGAGCTGCACTGA
TATAAAAATCAGTACACTCCAACGCCACGTCAAAATTGCGCTGCATTTCC
CCTGCGTTGTCGCTTGTGTGTGTACACGAGGAGGTAGGAGGAGGAAGATG
AGACACACACAACCCTTTGGCCTGTTCCTGAGCATCTTTGCGCTTTCGCT
CGATTTTATAAACGCATATGTGGATGTGTACAATGCAATTTTCTCCCTCT
CTCTGTCAGCCTTTCAGATTTGGTCGGTGCGAGCGTGCATGCGCAACAAG
GAGGGTTCCTTCCTTCGAGAAGCAGCCAACAGATCCCACCCGGAGCTATA
TGTATCAATGATTGTCTCCTTGTCTTGCCGATATTCTGCCGGGTAGAAAA
TACGGCCTTGGGGCTACAGGTGTGACACAAGACGCTAAGCCTTGTCTTAA
AATGCTCTGACTGGTCTAAGCAACGCAAGGCTCCGCCTCTGTAGAAGCGC
TCTCACCGAAGAAGGGGGACACGCGTTGCTACAGCCAGCGAAAGCCATCC
TCTTCACTCCTGACCACACACACACACCCCGAAATCCCTCGCACAGGTTC
ATATCACCCGCAACAACAACAACAACACACGCACGACAACCATGTCCTGT
CGCATCTACGTTGgtacgtttcctccttccctccactctttcctcttagt
tccctccctcatcaccttccctctgcaagacccgacttcccctctcatct
ttccatccctctatcctattctacctccagGCAATTTGCCTATGGACGTT
CGAGAGCGAGAGCTTGACGATCTTTTTTACAAGTACGGGCGCATCCGTGG
CATTGACATTAAACGGCCTAATCGgtattcatgaaggaagagaggggcga
gggaggggaagtaaggtccgatgaacgcagccattattctggatttttta
catccatctcagtctggcaattaatggactcatcacaggccatgcatgtc
ttcttggtctgacaaacctaccatccatcccccctccccttcctagCCCC
CCCGCCTATGCCTTCGTCGCTTTCGAGGATCCTCGGGACGCTAAGGATGC
TGTCTACTACCGAGACAATTACGACTTTGACGGGGGCCGTATCCGCGTGG
AGCTGGCCAATGAGGCCCCTCGTCGACGGGATGGAGgtatgccttccttc
catccttccctccctccctccctccctccctcttaccgtggggatggccc
gctttactcatccttctcaattattcccatccctccctccctgtctgtct
gttggtggcagGCTTCGGCGGTGGGCGTGGTGGAGGGCGCTCTCGCACTG
ACTTCCGGCTGGAGGTGACGGATCTCCCCGACCGGACATCTTGGCAAGAC
CTCAAGgtacctccctcctttcctccctcccttcctcccttcttccctcc
ctccctctctccctcccttcttcccttctatggatgaggtgttccacgcc
gacgtgaagagggacgcggcgactgtctccacacaccttcccattccttc
cgccctccctccctcttacacctgcccccctttccccttctctccttccc
tccctcttacacctccccgccctcctccctctccagGATTACTTCAAGGC
CGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGGACGGGGAGGGTGTGG
TGGAGTTTGCAAATAAAGATGACATGTTCGCTGCCAAGCGGAAGCTCGAT
GGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGAGgtacgccctcgctc
cctccctccctcccttccccccagcctccctccctccctccttccagccc
tctttctgcagcacacgccagagccccaacacctttaccctccctccctc
cctccctccctccctccctcagATCCGGGTCAGGTTGCCCAAGGGGAGCA
CTCTCCGATCCTCCTCCCGCAGCAAGAGCCGGAGCCACAGTCGATCGCGC
TCCCCCCCTTCCTCCCGCCGTCGCTCCCGCTCACCCCTCTCTCGATCACG
ATCTCCGCCTTCCAAGAAAAAGGGGGGAAGGGGCACAGACGACGAGGAGG
AGGGAAGAGGGGGGAGGGAAAGAAGGCCGGGAGGAAGATGAGCGAGGCGT
CGGCGGGGGATAGCAGCCCGGAGAGGAGCCCGAGGAAGGGGAAGAAAGAG
GAGGAGGAGGAGGAGGGAGGGCCCAGGGATGAGATTTAAGTGAGAAGGAG
GAGGATCAGGACGCAGAGAGAAAGGAGCAGGGGGTAAGGCGAGTAAGAAA
GAGAAAAAGAGAGCGTCAAAGGGAGAGAATGAGAAGGCTGAAGAGAGAGA
GAGAGATTGAGTGTGTGTCAAAAAGAGGGAGGGAGAGGGGGGGGGAAATG
AGTCAGAGCGGAAGGTTGGAAAGAGGGAGGGCGGCGGGAATTCGGAAGTG
TGTGTCTTCCATCATTCCGTCTAATTCTACTTAATTATTACTTTCTCATA
ATAAGATATAGTCCGGTTACCTTCCTCATTTCCACTTACACCCCTCCCCC
ACTTTTTCCTTTTCCTTGAAAGGTGTATTCTAGAGGGGTAGATCGTGTGG
GATGTGGGTGTGTGGGTGCCTAAGGCTTAGCCGTGGCTACTAGATGCTGG
CTATATGCGTTGTGCGTGCGTGGGAAGGTGGTGAAGACCTGCGGCTTGGG
GGAGGGTTTGACGGTGATGGCAAGCGGGGGGGGCTTGATCATGACATGAA
GGAAGGGAGCGAGGGAGCGAGGGAGCGAGGGAGCGAGGGAGAGACGCCTG
GACTGATGAGAGTGTTGGGCTGCACACGAGAGCGTGAGAGTGGGAATGAG
TCGCTTCAACCTTTCGGTGGAGGATACCACTCAGGTAACATGTTGCTTGT
CTGCTCTCCCTTCCTCCCTCCCTTCTTCCCTCACTTTGTCGACCTCGTCA
GTCTTGTTCTCCAAAACTCTCCTCCTCCTTCCCTTTGTCCGAGTCCTCCC
TTCTACTTAGTTGGCATTTGGGGTGGGCTTGGTCGGCCAGCCAGCAGCGA
GAGAGGAAGGGAAGGAGGACGGGTTCGAGGAAGGGACAAGCATAAAGAAG
AAGACCAGGCGCTGACGGAAGGGAAGGGAGAAGGGAGGGAGGGAGGGAGC
AGTCCGCTGCTTCCTGGTGTTTTTGCTTGGGGCAGTGCGTGGGTGCCCGG
TTAGTGGCAGGGTGGGTGAGGGAGAGGAGGGGGCCTACCCCTCCTCCTTC
TTCTTCTTTTTCTTCTTCTTCTTCTTTCTTCTCTCTTTC
back to top

protein sequence of NO24G02140.1

>NO24G02140.1-protein ID=NO24G02140.1-protein|Name=NO24G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MSCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFED
PRDAKDAVYYRDNYDFDGGRIRVELANEAPRRRDGGFGGGRGGGRSRTDF
RLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDGEGVVEFANKDDMFAA
KRKLDGTVFKNPFDSREIRVRLPKGSTLRSSSRSKSRSHSRSRSPPSSRR
RSRSPLSRSRSPPSKKKGGRGTDDEEEGRGGRERRPGGR*
back to top
Synonyms
Publications