NO24G02130, NO24G02130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02130 vs. NCBI_GenBank
Match: EWM24427.1 (putative e3 ubiquitin-protein ligase makorin-2, partial [Nannochloropsis gaditana]) HSP 1 Score: 157.9 bits (398), Expect = 1.100e-34 Identity = 77/111 (69.37%), Postives = 86/111 (77.48%), Query Frame = 0 Query: 586 RSC---PCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFL-EGR 693 R+C PC + PHT VTDP RK+NL++AYK QM +K CRYF YQ G+ EAS QSCPFG+SCFYAHLK DGTPLTPP LRTRMGEEGRVEVV EVKLSDFL +GR Sbjct: 8 RTCVRVPCANRSLTLSSPHTHHVTDPHRKKNLVRAYKAQMNKKPCRYFTYQEGDEEASFQSCPFGTSCFYAHLKHDGTPLTPPRLRTRMGEEGRVEVVQEVKLSDFLTQGR 118
BLAST of NO24G02130 vs. NCBI_GenBank
Match: CEP01453.1 (hypothetical protein PBRA_002059 [Plasmodiophora brassicae]) HSP 1 Score: 142.1 bits (357), Expect = 6.400e-30 Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 0 Query: 529 VVEEEERRSREAECMICTDAI--TGR-FGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDF 689 ++ EE R S +C IC D I +GR FGLL C H+FCL CIR+WR Q N+R+CP C+Q SHFVIP R+VTDP RK +I+ Y +++Q C++F +G +CPFGSSCFYAH EDGT P L+ +G +EV+ ++LSDF Sbjct: 223 MMAEERRLSVLLQCEICFDNIVRSGRKFGLLQGCDHAFCLPCIRSWR---GSTGQTKENLRACPMCRQDSHFVIPSDRMVTDPARKAAVIEKYTSRLRQIECKWFARGKG-------TCPFGSSCFYAHTNEDGTLAQPERLQHGANADGVIEVMKPMRLSDF 375
BLAST of NO24G02130 vs. NCBI_GenBank
Match: XP_009538702.1 (hypothetical protein PHYSODRAFT_566348 [Phytophthora sojae] >EGZ05841.1 hypothetical protein PHYSODRAFT_566348 [Phytophthora sojae]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 83/199 (41.71%), Postives = 111/199 (55.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAITG---RFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P K E EE L + EE R S + EC IC + I G RFGLL+ C HSFCL+C+R WR Q VR CP C+ ++F+IP +R+VT P RK+ LI Y+ + CR+F RG CPFG+SCFYAH DGT L +RT + +G+ +V+ +V+L + + Sbjct: 224 KICTFFLQGLCRYGDTCFYSHSLPEKVESEEEMLAMGEEIRLSADLECGICYENILGKGERFGLLSGCNHSFCLTCLRNWR---GSADQPKQTVRQCPMCRVETNFIIPSSRMVTKPERKKVLIDVYRKNLSAIPCRHFDEGRG-------ICPFGTSCFYAHRYPDGT-LASREVRTAVDADGQYDVLRQVRLEHYFQ 411
BLAST of NO24G02130 vs. NCBI_GenBank
Match: ETI38491.1 (hypothetical protein F443_15798 [Phytophthora parasitica P1569] >ETL85380.1 hypothetical protein L917_15070 [Phytophthora parasitica] >ETM38535.1 hypothetical protein L914_15204 [Phytophthora parasitica] >ETP36441.1 hypothetical protein F442_15635 [Phytophthora parasitica P10297]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 231 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 418
BLAST of NO24G02130 vs. NCBI_GenBank
Match: ETI38492.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL85381.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM38536.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETP36442.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 211 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 398
BLAST of NO24G02130 vs. NCBI_GenBank
Match: ETK78697.1 (hypothetical protein L915_15349 [Phytophthora parasitica] >ETL32129.1 hypothetical protein L916_15245 [Phytophthora parasitica] >ETO67264.1 hypothetical protein F444_15777 [Phytophthora parasitica P1976] >ETP08389.1 hypothetical protein F441_15629 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 231 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 418
BLAST of NO24G02130 vs. NCBI_GenBank
Match: ETK78698.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETL32130.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO67265.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP08390.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 211 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 398
BLAST of NO24G02130 vs. NCBI_GenBank
Match: XP_008895372.1 (hypothetical protein PPTG_04823 [Phytophthora parasitica INRA-310] >ETN19537.1 hypothetical protein PPTG_04823 [Phytophthora parasitica INRA-310]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 231 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 418
BLAST of NO24G02130 vs. NCBI_GenBank
Match: XP_008895375.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN19538.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 0 Query: 503 KICRFFIQGNSERG-------SRPGKGE-EEMRLVVEEEERRSREAECMICTDAIT---GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTANVRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 KIC FF+QG G S P + E EE L + EE R S++ EC IC + I RFGLL+ C HSFCL+C+R WR Q VR CP C+ + F+IP +R+VT P RK+ LI Y+ + CR+F RG +CPFG+SCFYAH DGT L +RT + +G+ +V+ +++L +FL+ Sbjct: 211 KICTFFLQGLCRYGDTCFYSHSLPERVESEEEMLAMGEEIRLSQDLECGICYEIILKKGERFGLLSGCNHSFCLTCLRNWRSSE---DQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSGIPCRHFDEGRG-------TCPFGTSCFYAHRYPDGT-LASRQVRTAVDSDGQYDVLRQIRLENFLK 398
BLAST of NO24G02130 vs. NCBI_GenBank
Match: GBG34640.1 (E3 ubiquitin-protein ligase makorin-1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 139.4 bits (350), Expect = 4.100e-29 Identity = 79/202 (39.11%), Postives = 109/202 (53.96%), Query Frame = 0 Query: 502 GKICRFF---IQGNSERGSRPGKGEEEMRLVVEE-----EERRSREAECMICTDAIT----GRFGLLTHCAHSFCLSCIRTWRQQHTDGSQDTAN-VRSCPCCKQVSHFVIPHTRLVTDPLRKENLIQAYKDQMKQKRCRYFVYQRGNPEASLQSCPFGSSCFYAHLKEDGTPLTPPSLRTRMGEEGRVEVVHEVKLSDFLE 691 G+ CR+ GN P ++ + E E + SRE EC IC + I GRFG+LT C H+FCLSCI+ WR D VR CP C++ S+FV+P R+V DP RK LI+ Y+ +MK+ CRYF +GN +CPFG+SCFY H+ +G P LRT EGR +V + +LS++ + Sbjct: 213 GERCRYTHPGADGNGGYAMSPAPHQQSAPMSAESAMDQFERQASRELECGICLEVIASNKDGRFGILTGCDHAFCLSCIKNWRSTEVSKGDDRKELVRRCPLCREPSYFVVPCDRMVRDPARKNALIEEYQVRMKKIPCRYF--DQGN-----GTCPFGTSCFYKHVYSNGQEENPGDLRTYKDAEGRTKVDNTSRLSEYFD 407 The following BLAST results are available for this feature:
BLAST of NO24G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02130 ID=NO24G02130|Name=NO24G02130|organism=Nannochloropsis oceanica|type=gene|length=2727bpback to top protein sequence of NO24G02130.1 >NO24G02130.1-protein ID=NO24G02130.1-protein|Name=NO24G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=694bpback to top Synonyms
Publications
|