NO24G02080, NO24G02080 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana]) HSP 1 Score: 97.1 bits (240), Expect = 5.800e-17 Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIAR----IEGERKLEVARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ E+A ++ + E+ARV+D E+FWKAEVER+KR++QLA T DYEPYQAA+ K+ +KRGGT G EE+E++
Sbjct: 26 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIARVED-----------KRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGTSGSEEKEEE 173
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana]) HSP 1 Score: 95.5 bits (236), Expect = 1.700e-16 Identity = 83/172 (48.26%), Postives = 107/172 (62.21%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVAR-------VQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ EI IE + E+A+ XXXXXXXXXXXXXX E+FWKAEVER+KR++QLA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++
Sbjct: 44 KAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 205
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana]) HSP 1 Score: 94.4 bits (233), Expect = 3.800e-16 Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 0
Query: 23 GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVAR-------VQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ EI IE + E+A+ XXXXXXXXXXXXXX E+FWKAEVER+KR++QLA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++
Sbjct: 7 GKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 153
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana]) HSP 1 Score: 87.8 bits (216), Expect = 3.500e-14 Identity = 82/183 (44.81%), Postives = 107/183 (58.47%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIAR----IEGERKLEV--------------ARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A ++ E+ +DXXXXXXXXXXXXXX E+FWKAEVER KR++QLA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++
Sbjct: 26 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKR-KKRGGTGGLEEKEEE 198
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana]) HSP 1 Score: 84.0 bits (206), Expect = 5.100e-13 Identity = 82/209 (39.23%), Postives = 111/209 (53.11%), Query Frame = 0
Query: 2 LWSS-GMKVAVTVWRRGAVCRRG-KGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIAR----IEGERKLEVAR--------------------------------VQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
LW + G + A +W + RRG KG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A ++ + E+A+ XXXXXXXXXXX E+FWKAEVER+KR++QLA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++
Sbjct: 43 LWQARGTRFATNLW---SSMRRGRKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 238
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana]) HSP 1 Score: 73.2 bits (178), Expect = 9.000e-10 Identity = 79/187 (42.25%), Postives = 100/187 (53.48%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIA----------------------RIEGERKLEVARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A XXXXXXXXXXXXXXXXE+FWKAEVER+KR++QLA T DYEPYQAA+ K+ + RGGT G EE+E++
Sbjct: 86 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KTRGGTSGSEEKEEE 262
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana]) HSP 1 Score: 72.8 bits (177), Expect = 1.200e-9 Identity = 61/165 (36.97%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ E+A E+ + AEVER+KR++QLA T DYEPYQAA+ K+ +KRGGT G EE+E++
Sbjct: 90 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEMA------------------------------PEIKY-AEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGTSGSEEKEEE 213
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana]) HSP 1 Score: 67.8 bits (164), Expect = 3.800e-8 Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGE-------RKLEVARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ EI ++ + XXXXXXXXXXXXXXXX +KR++QLA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++
Sbjct: 107 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKR-KKRGGTGGLEEKEEE 268
BLAST of NO24G02080 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana]) HSP 1 Score: 67.4 bits (163), Expect = 4.900e-8 Identity = 79/208 (37.98%), Postives = 102/208 (49.04%), Query Frame = 0
Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIAR----IEGERKLEV---------------------------------------ARVQDXXXXXXXXXXXXXXXXELFWKAEVERYKRDLQLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 171
+ GA+ RR GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ E+A IE + E+ XXXXXXXXXXXXXX E+FWKAEVER+KR++QLA T DYEPYQAA+ K+ +KRGG G EE+E++
Sbjct: 89 KAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGISGSEEKEEE 286 The following BLAST results are available for this feature:
BLAST of NO24G02080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02080 ID=NO24G02080|Name=NO24G02080|organism=Nannochloropsis oceanica|type=gene|length=1087bpback to top protein sequence of NO24G02080.1 >NO24G02080.1-protein ID=NO24G02080.1-protein|Name=NO24G02080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=172bpback to top Synonyms
Publications
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