NO24G02070, NO24G02070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana]) HSP 1 Score: 97.1 bits (240), Expect = 6.100e-17 Identity = 78/172 (45.35%), Postives = 102/172 (59.30%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ EI IE + E+A+ XXXXXXXXXX E+FWKAEVER+KR++ LA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++ Sbjct: 44 KAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 205
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana]) HSP 1 Score: 96.3 bits (238), Expect = 1.000e-16 Identity = 71/172 (41.28%), Postives = 95/172 (55.23%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ E+A E+ VQ KA EI R+ E+FWKAEVER+KR++ LA T DYEPYQAA+ K+ +KRGGT G EE+E++ Sbjct: 26 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEMA-------TEIKYVQSKAAAEIARV-------EDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGTSGSEEKEEE 173
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 74/157 (47.13%), Postives = 96/157 (61.15%), Query Frame = 0 Query: 23 GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ EI IE + E+A+ XXXXXXXXXX E+FWKAEVER+KR++ LA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++ Sbjct: 7 GKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 153
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana]) HSP 1 Score: 87.8 bits (216), Expect = 3.700e-14 Identity = 81/190 (42.63%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEI------------------KRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A E+ VQ +A EI XXXXXXXXXX E+FWKAEVER KR++ LA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++ Sbjct: 26 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMA-------TEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKR-KKRGGTGGLEEKEEE 198
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana]) HSP 1 Score: 86.7 bits (213), Expect = 8.200e-14 Identity = 82/216 (37.96%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 2 LWSS-GMKVAVTVWRRGAVCRRG-KGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKR------------------------------------MAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 LW + G + A +W + RRG KG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A E+ VQ KA EI + XXXXXXX E+FWKAEVER+KR++ LA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++ Sbjct: 43 LWQARGTRFATNLW---SSMRRGRKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMA-------TEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKR-KKRGGTGGLEEKEEE 238
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 4.700e-9 Identity = 62/172 (36.05%), Postives = 83/172 (48.26%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ E+A EIK AEVER+KR++ LA T DYEPYQAA+ K+ +KRGGT G EE+E++ Sbjct: 90 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEMA------------------PEIK--------------------YAEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGTSGSEEKEEE 213
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana]) HSP 1 Score: 70.5 bits (171), Expect = 6.100e-9 Identity = 74/187 (39.57%), Postives = 95/187 (50.80%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIA---------------RIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG FSST+HT GT G E G K+ T +G + V+G+ A V D+ E+A XXXXXXXXXXXXE+FWKAEVER+KR++ LA T DYEPYQAA+ K+ + RGGT G EE+E++ Sbjct: 86 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KTRGGTSGSEEKEEE 262
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana]) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-8 Identity = 68/172 (39.53%), Postives = 92/172 (53.49%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEIKRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG FSST+HT GT G E G K+ T+ +G + V+G+ A V D+ EI ++ + XXXXXXXXXXXX +KR++ LA+T DYEPYQAA+ K+ +KRGGTGGLEE+E++ Sbjct: 107 KAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELG------KKWATI---FQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKR-KKRGGTGGLEEKEEE 268
BLAST of NO24G02070 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana]) HSP 1 Score: 68.9 bits (167), Expect = 1.800e-8 Identity = 76/215 (35.35%), Postives = 100/215 (46.51%), Query Frame = 0 Query: 15 RRGAVCRR-------GKGCILRGAFSSTSHT--GTDRGSEGGFRQQSIDKYETVKVTVAVVGTIAAVSGSIAYGVHRLDEKEIARIEGERKLEVARVQDKAETEI-------------------------------------------KRMAGXXXXXXXXXXXXELFWKAEVERYKRDLHLAHTFDYEPYQAAISQKQGQKRGGTGGLEEEEKK 178 + GA+ RR GKG +LRG F ST+HT GT G E G K+ T +G + V+G+ A V D+ E+A E+ ++ KA EI XXXXXXXXXX E+FWKAEVER+KR++ LA T DYEPYQAA+ K+ +KRGG G EE+E++ Sbjct: 89 KAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELG------KKWATF---FQGIGAVLGVAGATAVVVRTFDQTEMA-------TEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKR-KKRGGISGSEEKEEE 286 The following BLAST results are available for this feature:
BLAST of NO24G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02070 ID=NO24G02070|Name=NO24G02070|organism=Nannochloropsis oceanica|type=gene|length=1762bpback to top protein sequence of NO24G02070.1 >NO24G02070.1-protein ID=NO24G02070.1-protein|Name=NO24G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=179bpback to top Synonyms
Publications
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