NO24G02050, NO24G02050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G02050 vs. NCBI_GenBank
Match: EWM24417.1 (hypothetical protein Naga_101269g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 107.1 bits (266), Expect = 2.500e-20 Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGGAAPEHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 MLTTPFSWKE FTPKE+WLGGAAP+ DS +ELK+ M G+ + L++E+EMPL+I QH+RL+ELI ATVWQ Sbjct: 54 MLTTPFSWKECFTPKEKWLGGAAPDGKDSHAELKRLMGGLGFKLLKEQEMPLIIHQHARLFELITPMATVWQ 125
BLAST of NO24G02050 vs. NCBI_GenBank
Match: OLP85894.1 (Meiotically up-regulated gene 158 protein [Symbiodinium microadriaticum]) HSP 1 Score: 73.6 bits (179), Expect = 3.100e-10 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGG----AAPEHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 ++ TPFSW E FTPK++WLGG + S +LKK ME + + E+++PL+IR+H R Y+ I ++AT+W+ Sbjct: 3371 VILTPFSWLEDFTPKQKWLGGFMDPITQTQVRSKDQLKKLMEERGFAKIGEQQVPLLIREHQRKYQYIVSEATIWR 3446
BLAST of NO24G02050 vs. NCBI_GenBank
Match: OLP85880.1 (Cyclin-L1-1 [Symbiodinium microadriaticum]) HSP 1 Score: 73.6 bits (179), Expect = 3.100e-10 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGG----AAPEHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 ++ TPFSW E FTPK++WLGG + S +LKK ME + + E+++PL+IR+H R Y+ I ++AT+W+ Sbjct: 1406 VILTPFSWLEDFTPKQKWLGGFMDPITQTQVRSKDQLKKLMEERGFAKIGEQQVPLLIREHQRKYQYIVSEATIWR 1481
BLAST of NO24G02050 vs. NCBI_GenBank
Match: XP_002292254.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90229.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.4 bits (176), Expect = 6.800e-10 Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGG----AAPEHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 ++ TPF+W E FTP+ +WLGG + E + S +LK+ ME + + + EE+MPLVIR+H R Y+ I ++AT W+ Sbjct: 913 VMVTPFTWLEEFTPRSKWLGGFHDPVSQEPMYSKDKLKEIMEELGFDKIHEEQMPLVIREHRRKYQYIISEATGWR 988
BLAST of NO24G02050 vs. NCBI_GenBank
Match: OEU08449.1 (hypothetical protein FRACYDRAFT_212712 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 70.5 bits (171), Expect = 2.600e-9 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGG----AAPEHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 ++ TPFSW FTP+ +WLGG + + S EL+ ME + + EEEMPLVIR+H+R Y+ I ++AT W+ Sbjct: 759 VMVTPFSWLTEFTPRGKWLGGFLDPVSGTPIRSKDELQSIMENNGFTKIHEEEMPLVIREHARKYQYIVSEATGWK 834
BLAST of NO24G02050 vs. NCBI_GenBank
Match: GAX27842.1 (hypothetical protein FisN_13Hh051 [Fistulifera solaris]) HSP 1 Score: 69.7 bits (169), Expect = 4.400e-9 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0 Query: 1 MLTTPFSWKEGFTPKERWLGGAAPEHLD----SLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 ++ TP+SW FTP+ERWLGG H + S S L+ ME + + EE++PL+IR+H R Y+ I ++AT W+ Sbjct: 229 VIVTPYSWLCEFTPRERWLGGFTDPHTNESVYSKSTLQTVMESDGFEKIHEEQVPLIIREHQRKYQYIVSEATGWR 304
BLAST of NO24G02050 vs. NCBI_GenBank
Match: WP_079433228.1 (5-histidylcysteine sulfoxide synthase [Zoogloea sp. LCSB751]) HSP 1 Score: 68.6 bits (166), Expect = 9.800e-9 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0 Query: 2 LTTPFSWKEGFTPKERWLGGAAP--EHLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQGPR 76 L +P+SW E FTP+E WLGG + + S LK + +VL REEE+PLVIR+H+R Y+ I +WQ R Sbjct: 724 LFSPYSWLEQFTPREAWLGGYEKDGQAVRSADTLKAFLAAEGFVLRREEEVPLVIREHARKYQFIVTHGMLWQRER 799
BLAST of NO24G02050 vs. NCBI_GenBank
Match: OUW64761.1 (putative 4-mercaptohistidine N1-methyltransferase [Opitutales bacterium TMED207]) HSP 1 Score: 68.6 bits (166), Expect = 9.800e-9 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 2 LTTPFSWKEGFTPKERWLGGAAPEHLDSLSELKKEMEGM-DYVLVREEEMPLVIRQHSRLYELIAAQATVW 72 +TTPF+W E FTPK+RWLG A DS S L++ +EG + L++ +MP +IR+HSR ++ AQA+ W Sbjct: 179 MTTPFTWLESFTPKDRWLGANAE---DSFSGLREALEGQGGFKLLKSWDMPFLIREHSRKFQFSIAQASRW 246
BLAST of NO24G02050 vs. NCBI_GenBank
Match: PDH26556.1 (putative 4-mercaptohistidine N1-methyltransferase [Puniceicoccaceae bacterium MED-G32]) HSP 1 Score: 68.6 bits (166), Expect = 9.800e-9 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 2 LTTPFSWKEGFTPKERWLGGAAPEHLDSLSELKKEMEGM-DYVLVREEEMPLVIRQHSRLYELIAAQATVW 72 +TTPF+W E FTPK+RWLG A DS S L++ +EG + L++ +MP +IR+HSR ++ AQA+ W Sbjct: 179 MTTPFTWLESFTPKDRWLGANAE---DSFSGLREALEGQGGFKLLKSWDMPFLIREHSRKFQFSIAQASRW 246
BLAST of NO24G02050 vs. NCBI_GenBank
Match: ART37598.1 (E387 [uncultured bacterium]) HSP 1 Score: 68.2 bits (165), Expect = 1.300e-8 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 0 Query: 2 LTTPFSWKEGFTPKERWLGGAAPE--HLDSLSELKKEMEGMDYVLVREEEMPLVIRQHSRLYELIAAQATVWQ 73 L +P+SW E FTP WLGG A + ++S L+ +VL RE EMPLVIR+HSR Y+ I A A +WQ Sbjct: 726 LFSPYSWLEQFTPHGAWLGGYAKDGHEVNSADALRGLFTQQGFVLRREAEMPLVIREHSRKYQYIVAHAMLWQ 798 The following BLAST results are available for this feature:
BLAST of NO24G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02050 ID=NO24G02050|Name=NO24G02050|organism=Nannochloropsis oceanica|type=gene|length=443bpback to top protein sequence of NO24G02050.1 >NO24G02050.1-protein ID=NO24G02050.1-protein|Name=NO24G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=76bpback to top Synonyms
Publications
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