NO24G01530, NO24G01530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01530 vs. NCBI_GenBank
Match: XP_005854540.1 (small gtp-binding protein [Nannochloropsis gaditana CCMP526] >EKU21822.1 small gtp-binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 167.9 bits (424), Expect = 4.800e-38 Identity = 102/200 (51.00%), Postives = 133/200 (66.50%), Query Frame = 0 Query: 67 GLHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFNK--AKVATQGMDEEEGRAGRRRVAETAVEEEKPVSPPSATAVAGAVAVGSARSLYVAGTAGKAAAGRTPVVPVACTASSASLPLLISLVRSMAKRRRPSMLIFNI 265 GLHRLL+GLVGEMNAGKST LNALTQQATSIVDATPGTT+D+K A++E+HGLGP+KLLDTAG+DD G LG+KK+ +T+ A++E+D ALVVI+PF+K + ++Q + GR GRRR G +G S+ +A TP AC A +SL LL SLV++M +R R +ML+FN+ Sbjct: 120 GLHRLLIGLVGEMNAGKSTCLNALTQQATSIVDATPGTTADVKAALLELHGLGPVKLLDTAGIDDVGALGEKKKERTYRALKEIDVALVVIDPFSKILSSSSSQRPYDGTGREGRRR-------------------DEGGGGIGEDMSI---------SAMATPSY-TACQADPSSLSLLSSLVQAMDRRGRRAMLVFNL 290
BLAST of NO24G01530 vs. NCBI_GenBank
Match: OPL19397.1 (hypothetical protein AVO35_10960 [Candidatus Aegiribacteria bacterium MLS_C]) HSP 1 Score: 122.5 bits (306), Expect = 2.300e-24 Identity = 57/90 (63.33%), Postives = 77/90 (85.56%), Query Frame = 0 Query: 70 RLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEP 160 RL+LG+ G +NAGKST++N LTQQ TSIVD PGTT+DIK+++MEIHGLGP+++LDTAG+D+ +LG+KKR KT A+ EVD A++VI+P Sbjct: 6 RLVLGIFGRINAGKSTLMNLLTQQETSIVDPDPGTTADIKSSLMEIHGLGPVRILDTAGLDEGCQLGEKKRRKTLSALEEVDLAILVIDP 95
BLAST of NO24G01530 vs. NCBI_GenBank
Match: KZD17198.1 (hypothetical protein AO394_06065 [Candidatus Fermentibacter daniensis] >KZD18306.1 hypothetical protein AO396_10525 [Candidatus Fermentibacter daniensis]) HSP 1 Score: 121.3 bits (303), Expect = 5.100e-24 Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = 0 Query: 68 LHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFNKAKVATQGMDEEEGRAGRRRVAETAV 188 + RL++G+ G +NAGKST++N LTQQ TSIVD TPGTT+DIK+A+MEIH LGP++LLDTAG+D+ G LG+KKR K + A+ + D AL+V++P + ++E G R AV Sbjct: 4 IDRLVIGIFGRINAGKSTLMNLLTQQETSIVDPTPGTTADIKSAVMEIHSLGPVRLLDTAGLDEGGILGEKKRGKGFAALEQCDIALLVVDPVQALLSGSLEVEESVGNFARMHGKALAV 123
BLAST of NO24G01530 vs. NCBI_GenBank
Match: PIE52171.1 (hypothetical protein CSA37_07945 [Candidatus Fermentibacteria bacterium]) HSP 1 Score: 119.0 bits (297), Expect = 2.500e-23 Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0 Query: 70 RLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEP 160 RL+LG+ G +NAGKST++N LTQQ TSIVD+ PGTT+DIK+++MEIH LGP+++LDTAG+D+ LG KKR K A+ EVD AL+V++P Sbjct: 6 RLVLGIFGRINAGKSTLMNLLTQQETSIVDSQPGTTADIKSSVMEIHSLGPVRILDTAGLDEASDLGGKKRKKALAALEEVDIALMVVDP 95
BLAST of NO24G01530 vs. NCBI_GenBank
Match: XP_001309182.1 (small GTP-binding protein [Trichomonas vaginalis G3] >EAX96252.1 small GTP-binding protein, putative [Trichomonas vaginalis G3]) HSP 1 Score: 117.1 bits (292), Expect = 9.600e-23 Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 Query: 68 LHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFN 162 L R + +VG MNAGKST++NA+TQQ TSIVD+TPGTT+D K A+MEIH LGP KL+DTAG+D+ G LG KK KT A++E D L VI+P N Sbjct: 16 LPRTHISMVGFMNAGKSTIMNAITQQPTSIVDSTPGTTADTKVALMEIHALGPCKLIDTAGIDEKGTLGRKKYIKTESAVKESDVVLFVIDPTN 109
BLAST of NO24G01530 vs. NCBI_GenBank
Match: KXZ55371.1 (hypothetical protein GPECTOR_3g5 [Gonium pectorale]) HSP 1 Score: 117.1 bits (292), Expect = 9.600e-23 Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = 0 Query: 67 GLHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVI--EPFNKAKVATQGMDEEEGRAGRRRVAETAVE 189 G+ R+ +G+ G MNAGKST++NAL QQ IVD+TPGTT+D+KT ++E+H LGP K+LDTAG+D+TG LGDKKR K ++E D A+VV+ E KA+ + G + + + RRV E AV+ Sbjct: 628 GVPRINIGVFGVMNAGKSTLVNALAQQEACIVDSTPGTTADVKTVLLELHDLGPAKVLDTAGLDETGVLGDKKRRKALNTLKECDVAVVVVDTETLRKAR-SVPGYNLTDILSWERRVVEQAVK 750
BLAST of NO24G01530 vs. NCBI_GenBank
Match: OGE84172.1 (hypothetical protein A2Y39_06320, partial [Candidatus Delongbacteria bacterium GWF2_40_14]) HSP 1 Score: 116.7 bits (291), Expect = 1.300e-22 Identity = 55/107 (51.40%), Postives = 78/107 (72.90%), Query Frame = 0 Query: 68 LHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFNKAKVATQGMDEEE 175 + R+ +G+ G +N+GKST++N +TQQ TSIVD TPGTT+D+KT +MEIH LGP+K+ DTAG+D+ G LG+KK+ KT+ A++ D LVVI N V + E+E Sbjct: 1 MERINIGIFGRVNSGKSTLMNLITQQETSIVDPTPGTTADVKTTVMEIHELGPVKIFDTAGIDEKGILGEKKKQKTFNALKRSDIVLVVINTNNSDIVKDNFLTEKE 107
BLAST of NO24G01530 vs. NCBI_GenBank
Match: XP_001691465.1 (iron hydrogenase assembly protein [Chlamydomonas reinhardtii] >AAS92601.1 Fe-hydrogenase assembly protein [Chlamydomonas reinhardtii] >PNW82842.1 hypothetical protein CHLRE_06g296750v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 114.8 bits (286), Expect = 4.800e-22 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 0 Query: 67 GLHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFNKAKVATQG 170 G+ R+ +G+ G MNAGKST++NAL QQ IVD+TPGTT+D+KT ++E+H LGP KLLDTAG+D+ G LGDKKR K ++E D A++V++ A G Sbjct: 672 GVPRINIGVFGVMNAGKSTLVNALAQQEACIVDSTPGTTADVKTVLLELHALGPAKLLDTAGLDEVGGLGDKKRRKALNTLKECDVAVLVVDTDTAAAAIKSG 774
BLAST of NO24G01530 vs. NCBI_GenBank
Match: XP_004344717.1 (iron hydrogenase assembly protein [Acanthamoeba castellanii str. Neff] >ELR20974.1 iron hydrogenase assembly protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 114.4 bits (285), Expect = 6.200e-22 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 0 Query: 68 LHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIEPFNKAKVATQGMDEEEGRAGRRRVAETA 187 L R G+ G MN+GKST++N ++QQ TSIVD+ PGTT+D K A+ME+H LGP+KL DT G+D+ G LG+KKR K ++ ++E +AA+VV+ PFN A + +E A +++ ++A Sbjct: 4 LSRDCAGIFGAMNSGKSTLMNLISQQETSIVDSKPGTTADTKVALMEMHDLGPVKLFDTPGIDEEGLLGEKKRRKAFDVLKECNAAVVVVNPFNPASLEAARDVIQEASAKQKKGDDSA 122
BLAST of NO24G01530 vs. NCBI_GenBank
Match: PNH10804.1 (GTPase Der [Tetrabaena socialis]) HSP 1 Score: 114.4 bits (285), Expect = 6.200e-22 Identity = 51/92 (55.43%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 67 GLHRLLLGLVGEMNAGKSTVLNALTQQATSIVDATPGTTSDIKTAIMEIHGLGPIKLLDTAGVDDTGRLGDKKRNKTWEAMREVDAALVVIE 159 G+ R+ +G+ G MNAGKST++NAL+QQ IVD+TPGTT+D+KT ++E+H LGP KLLDTAG+D+ G LG+KKR K ++E D A++V++ Sbjct: 607 GVPRINIGVFGVMNAGKSTLVNALSQQEACIVDSTPGTTADVKTVLLELHALGPAKLLDTAGLDEAGALGEKKRRKALSTLKECDVAVIVVD 698 The following BLAST results are available for this feature:
BLAST of NO24G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01530 ID=NO24G01530|Name=NO24G01530|organism=Nannochloropsis oceanica|type=gene|length=1052bpback to top protein sequence of NO24G01530.1 >NO24G01530.1-protein ID=NO24G01530.1-protein|Name=NO24G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bpback to top Synonyms
Publications
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