NO24G01470, NO24G01470 (gene) Nannochloropsis oceanica

Overview
NameNO24G01470
Unique NameNO24G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1609
Alignment locationchr24:389867..391475 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:389867..391475 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01470.1NO24G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01470.1NO24G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01470 ID=NO24G01470|Name=NO24G01470|organism=Nannochloropsis oceanica|type=gene|length=1609bp
ACAGACAGACAGCCAGCTTCCAGCGATGAGCCAGCGCGCTGTGCTCGTCC
GCCCCGGGGAGCGCCTCCAAGgtacgtatttagagattgcttgtggcgcg
catgcatgttagtgatgatgatgcttgaccatcaaacggacatcacaatg
atcacaagGCCGGGGCGGCGGGCGGGGAAACAAATTTCGTCCAGTTGTCC
GGCCCCGACCTCCTGGCTGCAGCCCTCCCTCCCGCCCTCCGTCTCGCCCG
GTGCTCGCCGCCCACAATGACGACGAGGAGGAGGAGGAAGAGGACGAGGA
AGAGAAAGCGGAAGAGGAAAAGGACAAGAACCAGCCACACCACGAAGGAG
ATGGAGAGCTACACGAGCCCCAAATACAGCAGCAAACGTCGCTGCAAGTA
CTGCAGCCGATGTCTCGGCAGCTACAGCAGCTGCAACAGCGGCACAAGCA
GCAGCCGCAGCGGCAGCAAAAGCATTTCAGTCAAGAGGATGATATAGATG
AGGAGGAGGAGGAGGAGGAGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAA
TGCGAAAACGAGAAGGAGCAGCACGAAGAAGAAAGAGCAGAAGCGGCGGA
AGGAGCAGCAGCGATCGAAGGGCTGCACATCTCCTTTTCTTCGTCCGAGC
AGCCGCAGCACGGAGTCCCAACGCGGCGGGCGCCGATGGTAATCCAAGCC
CCAACGATGACGAATGCCGGCCGTTACACCCTTTCTACCTCACTTGCCGC
GTCGTCTTCTTCTGCAACTGCTGTACGTCAACGCGTGACCACTACTTCTT
CACCACCACAAGAAGAGGACGGAGAGGAGGAGGAGGAGGAGGAGGAGGGG
GACGTGGAAGCGCTCCGGGCACTTATGAATCTAGGAGGAAGGAAGAGGGA
AGGGAAGAAGACGAGAGGGCAGCAGCAGCAGAAGAGTGGAAAGCAGAAAG
GAAAGGGCAAAGGTAAGGCTATCACAACTACTGCTGCTGCCGCCGCTGCT
GCTGCTGCTGCTTCAACGACTGATACCGCAGTTGCCAGGAAAGGTAGAAA
GAGGACGCCGAAAAGGAAGATCAATGCAGAGATGGAGAATGACGAAGGAA
AAGAGGAGAAACAGGAAGAAGGGGAGAAAGACTATATTAATAAGGCAAAG
AAGGGAGGGAAAAGAGTCAAGAAGACGGTAGTTGTATCGCCAGCTGCTGG
GACGAAGGGAGGGAAGAAGGGATCAGCAGCGATTGTAGAGGGAGTAGGGA
AGAGGAGGGTAGGGGAGGACATTGCGACGAGTGATGCTCCTCCTGAGGGA
AAGGGCAAAAAGAATGTACTTGCTGCCGCAGCGCTAGCCAAGAAGAAGAA
GGAGAAGCAGCAGAAGTTCAAGAAAGAGGAAGCAAAGCGCCTAGCGAAGG
AGACCCGGAAGAAAGAGAAAAAGGAGAGGAGCGAGGAGCGGAAGAAGGCC
AAGGCTGCCGCTGCTGCTGCCGAGCCTATCTCTATCACAGGCCGCAGCGG
ACGCCGTCGTCGTGTCATCCCACCCCCACCTCCTTCCTCCTCCTCCTCCT
CCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCGTC
TTCCTCTGA
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protein sequence of NO24G01470.1

>NO24G01470.1-protein ID=NO24G01470.1-protein|Name=NO24G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bp
MSQRAVLVRPGERLQGRGGGRGNKFRPVVRPRPPGCSPPSRPPSRPVLAA
HNDDEEEEEEDEEEKAEEEKDKNQPHHEGDGELHEPQIQQQTSLQVLQPM
SRQLQQLQQRHKQQPQRQQKHFSQEDDIDEEEEEEEEVEVEEEEEECENE
KEQHEEERAEAAEGAAAIEGLHISFSSSEQPQHGVPTRRAPMVIQAPTMT
NAGRYTLSTSLAASSSSATAVRQRVTTTSSPPQEEDGEEEEEEEEGDVEA
LRALMNLGGRKREGKKTRGQQQQKSGKQKGKGKGKAITTTAAAAAAAAAA
STTDTAVARKGRKRTPKRKINAEMENDEGKEEKQEEGEKDYINKAKKGGK
RVKKTVVVSPAAGTKGGKKGSAAIVEGVGKRRVGEDIATSDAPPEGKGKK
NVLAAAALAKKKKEKQQKFKKEEAKRLAKETRKKEKKERSEERKKAKAAA
AAAEPISITGRSGRRRRVIPPPPPSSSSSSLLLLLLLLLLLFLLFVFL*
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Synonyms
Publications