NO24G01450, NO24G01450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_005854539.1 (tubulin-specific chaperone a [Nannochloropsis gaditana CCMP526] >EKU21821.1 tubulin-specific chaperone a [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.1 bits (375), Expect = 9.700e-33 Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0 Query: 1 MGRLSDNGPATIDDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQATTA 121 MG L+D A D+L RQLKIKVGVA+RL KE ASYE EA AQEQKIA MR G+D YDIKKQEEVLQESYMMIPDSK+RLQAA+E L AF+T+ ++VK +QESD+ AEA L Q TA Sbjct: 1 MGPLTDQNTAGTDELLRQLKIKVGVARRLIKEAASYEKEAAAQEQKIAGMRTEGRDTYDIKKQEEVLQESYMMIPDSKSRLQAALEHLAAFLTQSRDVKEVQESDVYAEANELATQLVTA 120
BLAST of NO24G01450 vs. NCBI_GenBank
Match: EWM24337.1 (tubulin-specific chaperone a [Nannochloropsis gaditana]) HSP 1 Score: 149.1 bits (375), Expect = 9.700e-33 Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0 Query: 1 MGRLSDNGPATIDDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQATTA 121 MG L+D A D+L RQLKIKVGVA+RL KE ASYE EA AQEQKIA MR G+D YDIKKQEEVLQESYMMIPDSK+RLQAA+E L AF+T+ ++VK +QESD+ AEA L Q TA Sbjct: 1 MGSLTDQNTAGTDELLRQLKIKVGVARRLIKEAASYEKEAAAQEQKIAGMRTEGRDSYDIKKQEEVLQESYMMIPDSKSRLQAALEHLAAFLTQSRDVKEVQESDVYAEANELATQLVTA 120
BLAST of NO24G01450 vs. NCBI_GenBank
Match: CBN74602.1 (putative: Beta-tubulin folding cofactor A [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 1.700e-21 Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 0 Query: 14 DLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQATTAA 122 D ARQLKIK+GV KR+ KEVASYE EA E K+ MR+ G+D YDI+KQEEVLQESYMMIPDSK+RL A+ED+E F+ EH +GL +D L EA L+ +A A Sbjct: 3 DTARQLKIKLGVCKRMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGAEGL-PTDQLEEAKGLLVEAGITA 109
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_020631879.1 (tubulin-specific chaperone A-like [Orbicella faveolata]) HSP 1 Score: 86.3 bits (212), Expect = 7.700e-14 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 10 ATIDDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVT---------EHQEVKGLQESDILAE 110 A+ D RQLKIK GV KRL KE YE EAV Q K+ M+ +D YDIKKQ+EVL+ES +MIPD K RL+ A +DL+ V EH+ K + E+ +L E Sbjct: 2 ASASDPKRQLKIKTGVVKRLAKEKEMYEKEAVDQAAKVEKMKAEEKDEYDIKKQKEVLEESRIMIPDCKRRLKTAYDDLKKLVADTEELCETEEHKNAKAILENTVLEE 110
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_014600664.1 (PREDICTED: tubulin-specific chaperone A [Polistes canadensis]) HSP 1 Score: 85.9 bits (211), Expect = 1.000e-13 Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = 0 Query: 13 DDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQE----SDILAEATA 113 D R LKIK GV KRL KE +YE EA Q Q+I ++E+ +D YDIKKQEEVLQES MM+PD + RL A E+L++ + Q++K +++ +L EA A Sbjct: 3 DPRIRTLKIKTGVVKRLAKEKVTYEKEAAQQRQRIQQLKEQDKDGYDIKKQEEVLQESLMMVPDCQRRLVKAFEELKSILDTEQDLKEVEDYIEAEKVLQEAEA 106
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_015190252.1 (PREDICTED: tubulin-specific chaperone A [Polistes dominula]) HSP 1 Score: 85.9 bits (211), Expect = 1.000e-13 Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = 0 Query: 13 DDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQE----SDILAEATA 113 D R LKIK GV KRL KE +YE EA Q Q+I ++E+ +D YDIKKQEEVLQES MM+PD + RL A E+L++ + Q++K +++ +L EA A Sbjct: 3 DPRIRTLKIKTGVVKRLAKEKVTYEKEAAQQRQRIQQLKEQDKDGYDIKKQEEVLQESLMMVPDCQRRLVKAFEELKSILDTEQDLKEVEDYIEAEKVLQEAEA 106
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_021346015.1 (tubulin-specific chaperone A-like [Mizuhopecten yessoensis] >OWF54046.1 Tubulin-specific chaperone A [Mizuhopecten yessoensis]) HSP 1 Score: 85.9 bits (211), Expect = 1.000e-13 Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 0 Query: 13 DDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQATTA 121 D +QLKIK GV KRLTKE SYE E V QE+ I M+ G+D YDIKKQ EVL ES MIPD+K RL +EDL+ ++ + E+K E++ A + +A TA Sbjct: 3 DPNMKQLKIKTGVVKRLTKEKYSYEKEVVKQEEHIEKMKADGKDPYDIKKQGEVLDESKDMIPDTKRRLTKGLEDLQKYMEQADELK---ETEEFQTAVTMCKEAVTA 107
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_008552838.1 (PREDICTED: tubulin-specific chaperone A [Microplitis demolitor]) HSP 1 Score: 85.5 bits (210), Expect = 1.300e-13 Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0 Query: 13 DDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQA 118 D R LKIK GV KRL KE +YE E + Q++++ ++ G+D +DIKKQEEVLQES MM+PD + RL A E+L++ + Q++K E++I EA +V +A Sbjct: 3 DPRLRTLKIKTGVVKRLAKEKQTYEKELIQQQERVEKFKQEGKDQHDIKKQEEVLQESLMMVPDCQRRLMKAHEELKSILESEQDLK---ETEIYIEAEKVVAEA 104
BLAST of NO24G01450 vs. NCBI_GenBank
Match: XP_015524527.1 (PREDICTED: tubulin-specific chaperone A [Neodiprion lecontei]) HSP 1 Score: 85.1 bits (209), Expect = 1.700e-13 Identity = 49/105 (46.67%), Postives = 68/105 (64.76%), Query Frame = 0 Query: 13 DDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQA 118 D R LKIK GV KRL KE +YE EA Q +I +++G+D YDI+KQEEVLQES MM+PD + RL A E+L+ + Q++K E++ AEA ++ +A Sbjct: 3 DPRIRTLKIKTGVVKRLAKEKVTYEREAAQQRDRIQKFKDQGKDEYDIRKQEEVLQESLMMVPDCQRRLVKAFEELKKILESEQDLK---EAEAYAEAEKVILEA 104
BLAST of NO24G01450 vs. NCBI_GenBank
Match: OEU16399.1 (tubulin binding cofactor A [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 85.1 bits (209), Expect = 1.700e-13 Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 0 Query: 11 TIDDLARQLKIKVGVAKRLTKEVASYENEAVAQEQKIADMRERGQDIYDIKKQEEVLQESYMMIPDSKARLQAAVEDLEAFVTEHQEVKGLQESDILAEATALVNQ 117 ++ D RQL IK +RL+KEV+ Y++E E+KI +M+++ ++ YDIKK +EVL ESYMMIPDSK RL+ A+ DL +V E EVKGL+ ++ +A L+ + Sbjct: 5 SLPDPQRQLMIKTKACQRLSKEVSYYQDEVDENEEKIKEMKDQNRNPYDIKKFQEVLGESYMMIPDSKNRLEQALSDLTTYV-ESAEVKGLETNEWYVQAQELLKK 109 The following BLAST results are available for this feature:
BLAST of NO24G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01450 ID=NO24G01450|Name=NO24G01450|organism=Nannochloropsis oceanica|type=gene|length=2592bpback to top protein sequence of NO24G01450.1 >NO24G01450.1-protein ID=NO24G01450.1-protein|Name=NO24G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=129bpback to top protein sequence of NO24G01450.2 >NO24G01450.2-protein ID=NO24G01450.2-protein|Name=NO24G01450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=114bpback to top Synonyms
Publications
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