NO24G01440, NO24G01440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_004995385.1 (hypothetical protein PTSG_12054 [Salpingoeca rosetta] >EGD83021.1 hypothetical protein PTSG_12054 [Salpingoeca rosetta]) HSP 1 Score: 218.0 bits (554), Expect = 4.100e-53 Identity = 108/233 (46.35%), Postives = 139/233 (59.66%), Query Frame = 0 Query: 59 DSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292 + + VPWHQD AYLD E TLQ+TAW+P ++A NGC+QV+RG HRTG+ A HTCCAGGTWYV + + L C+ + TC VP GSVL L+NLIPHRSL N SP+IRWS DLRWQ ++PTGF GIK+ + MR G ++F + WD++ DR ++AA + G +G +E + E I GPWM RW IT+HN HT L Sbjct: 173 EQATVPWHQDIAYLDEECWSTLQLTAWVPLLDANEENGCMQVVRGGHRTGRAAHHTCCAGGTWYVDLPEEQIEDVL--ECNMATDVVTCPVPKGSVLLLNNLIPHRSLNNMSPNIRWSFDLRWQSPHEPTGFSGIKETLPMRMGG---------NKDFNINWDKWAREDRHTGMTEAAQRRSAAA----GADGTRE--NTXXXXDEKEFDTTIVGPWMHRWPITHHNRHTRAL 388
BLAST of NO24G01440 vs. NCBI_GenBank
Match: GAQ78590.1 (hypothetical protein KFL_000150440 [Klebsormidium nitens]) HSP 1 Score: 217.6 bits (553), Expect = 5.400e-53 Identity = 120/273 (43.96%), Postives = 155/273 (56.78%), Query Frame = 0 Query: 59 DSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRG-------KAQSKA------AANATHVQEDEDGKEGGKEEVSAAVAAG--------ADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 + + VPWHQDAAYLD + QVTAWIP + A+ RNGC+QV+ G HRTG+TAKHTCCAGGTWYV++D DA+ LGV+ TCEVPLG VLFL+N++PHRSL N S IRWS+DLRWQ +QP GF+G+K+ + M + + ++ V WD + + R K ++K+ A +A+HV E K G V +VA D IAGPWM +W I HN HT E +G WHKA Sbjct: 152 EQATVPWHQDAAYLDKVAWEVHQVTAWIPLVPASERNGCMQVVPGGHRTGRTAKHTCCAGGTWYVELDETDAAQTLGVDLQSAA--LTCEVPLGGVLFLNNILPHRSLNNLSDGIRWSLDLRWQKWDQPAGFYGLKEVIPMTKSG---------QPDYKVDWDGWANLSRSALQEGILKPETKSLVETVKAIDASHVVEPV-LKIDGVSSVMLSVAKSPDSPTSTLGDPFDTTIAGPWMDQWPIVFHNRHTERHERGSVQG--------WHKA 404
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019614553.1 (PREDICTED: phytanoyl-CoA dioxygenase-like [Branchiostoma belcheri]) HSP 1 Score: 216.1 bits (549), Expect = 1.600e-52 Identity = 103/239 (43.10%), Postives = 137/239 (57.32%), Query Frame = 0 Query: 57 HDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVG 296 +++ + VPWHQD AY+D E+ TL TAWIP ++AT +NGC+Q++RG HR G AKH CC GGTWYV+M ++ L +C + TCE+P GSVL +NL PHRSL+N S D+RWS+DLRW + +P G WG+K + MR S + + ++ W+ F AVDR K Q K+ N VA DE I GPWM RWEI +HN HT + G Sbjct: 167 YNEQTEVPWHQDNAYMDEEALGTLIPTAWIPLLDATVQNGCMQMVRGGHRKGVLAKHVCCTGGTWYVEMAKEEMEQTL--DCDLTKDVVTCEMPYGSVLLFNNLTPHRSLSNISTDVRWSLDLRWMNPGKPAGLWGLKGSLPMR---------SAKNPDLVIDWEAFEAVDRNKQQQKSVDN---------------------VAGAEDEFDATIQGPWMTRWEIVHHNKHTRSMVNPG 373
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003726259.2 (PREDICTED: phytanoyl-CoA dioxygenase, partial [Strongylocentrotus purpuratus]) HSP 1 Score: 215.7 bits (548), Expect = 2.000e-52 Identity = 101/231 (43.72%), Postives = 141/231 (61.04%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHT 289 ++ +VVPWHQD AYLDP + + LQVTAWIP ++ TA+NGC+QV R HR G TAKH CC GGTWYV+++++D LGV+ + + TC++ G VLF++N +PHRSL N S +IRWS+DLRWQ ++P GF+GIKD VLMR +E + N+ WDEF + D +A + ++ + + + + I GPWM RWE+ HN HT Sbjct: 151 NEEAVVPWHQDNAYLDPSALNVLQVTAWIPLLDVTAKNGCMQVARKGHRKGVTAKHRCCVGGTWYVEVEVEDMVETLGVDM--DKDLVTCDMSYGGVLFMNNCVPHRSLTNLSNNIRWSLDLRWQRPDKPNGFYGIKDSVLMR---------TEGDPNYKPNWDEFESTDHHSVAKEAFSEV--------------KDPNVEIKSDDVDFDTTITGPWMQRWELVFHNRHT 356
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002131482.1 (PREDICTED: phytanoyl-CoA dioxygenase-like [Ciona intestinalis]) HSP 1 Score: 214.9 bits (546), Expect = 3.500e-52 Identity = 110/254 (43.31%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 57 HDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 H++ + VPWHQD AYL+P S LQ+TAWIP ++A NGC+QV G H+ GKT KHTCCAGGTWYV+M D +LG+ ++ + TCEVP G VLFL+N IPH+SL N S IRWS+DLRW D +P GF+G+K+ VLMR+ ++ ++ + W E VDR K Q ++ ++ED D+ +AGPWM RW+I +HN HT L G WHKA Sbjct: 174 HNEQTTVPWHQDNAYLEPCSLECLQLTAWIPMVDANMVNGCMQVASGGHKAGKTLKHTCCAGGTWYVEMQEKDL-DQLGL---EKKDIVTCEVPYGGVLFLNNAIPHQSLENRSEIIRWSLDLRWHDPKKPNGFYGLKNSVLMRKA---------DDPDYKIDWSEMSGVDRTKLQMES------LKEDN------------------DDFTTEVAGPWMKRWDIVHHNRHTEMLNLKDNSTG-------WHKA 383
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002128388.1 (PREDICTED: phytanoyl-CoA dioxygenase-like [Ciona intestinalis]) HSP 1 Score: 214.5 bits (545), Expect = 4.500e-52 Identity = 112/254 (44.09%), Postives = 144/254 (56.69%), Query Frame = 0 Query: 57 HDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 H++ + VPWHQD AYL+P S Q+TAWIP ++A NGC+Q+ G HR GKT KHTCCAGGTWYV+M D +LGV+ + TCEVP G VLFL+N IPH+SL N S IRWS+DLRWQ ++P GF+GIKD V+MR+ +++ +++ W E R + Q K V ED+ +L P IAGPWM RW+I +HN HT L SWHKA Sbjct: 179 HNEQATVPWHQDNAYLEPRSLEVHQLTAWIPLVDANMVNGCMQLATGGHRAGKTLKHTCCAGGTWYVEMQEKDL-DQLGVDA--SKDIVTCEVPYGGVLFLNNAIPHQSLENLSDIIRWSLDLRWQRPDKPNGFYGIKDCVVMRK---------KDDPKYVIDWSELSGCCRSQLQMK------KVDEDD------------------TDLHPEIAGPWMKRWDIVHHNRHTELLNH------HKDTYTSWHKA 390
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_022094669.1 (phytanoyl-CoA dioxygenase-like isoform X1 [Acanthaster planci] >XP_022094671.1 phytanoyl-CoA dioxygenase-like isoform X1 [Acanthaster planci]) HSP 1 Score: 213.8 bits (543), Expect = 7.700e-52 Identity = 117/252 (46.43%), Postives = 149/252 (59.13%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQM-DMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWH 309 ++ + VPWHQD AYLDPE+ H LQ TAWIP ++ NGCLQVI HR G TA HTCC GGTWYVQ+ D D + LGV+ D T E+P G VL ++N IPH+SL N S IRWS+DLRWQ ++P GF+GIKD VLMR + ++ N+ + ++ F VDR KA + ++ E G VS A DE I GPWM RWE+ +HN HTA+ E E +DA +SWH Sbjct: 172 NEQATVPWHQDNAYLDPEALHVLQPTAWIPMLDVQKENGCLQVIPRGHRKGVTATHTCCVGGTWYVQIKDTSDMMTSLGVDVKDA---VTVEMPYGGVLLMNNAIPHQSLENYSDKIRWSLDLRWQRPDKPNGFYGIKDSVLMR---------TSKDPNYTIDFESFNKVDR---HIKAVDSMLGTEQKELG-------VSRDTKAD-DEFDTTIMGPWMKRWELVHHNRHTAKFER--NEDRDDAT-SSWH 397
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019646668.1 (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri]) HSP 1 Score: 213.4 bits (542), Expect = 1.000e-51 Identity = 112/253 (44.27%), Postives = 141/253 (55.73%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 ++ VPWHQD AYL +S TLQ TAWIP ++A NGC+QV+RG HR G T KH CC GGTWYV++ D+ + LG C + + TCEVP G VLFL+N IPHRSL N++ IRWS+DLRWQ ++P GF GIKD + MR S + + W++F +VDR Q + N A DE I GPWMLRWEI NHN HT + +G + E V W KA Sbjct: 162 NEEVTVPWHQDNAYLGVQSLGTLQPTAWIPLLDANTDNGCMQVVRGGHRKGITGKHVCCVGGTWYVELPEDEIQNTLG--CDLKNDIVTCEVPYGGVLFLNNAIPHRSLENNTDQIRWSLDLRWQHPDKPCGFEGIKDVIPMR---------SAKYPDLKPDWEKFESVDRTGNQQRQMNNK---------------------AGAEDEFDTTIQGPWMLRWEIVNHNKHTRSI--LGEDRSEKPV---WTKA 377
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_022094672.1 (phytanoyl-CoA dioxygenase-like isoform X2 [Acanthaster planci]) HSP 1 Score: 212.6 bits (540), Expect = 1.700e-51 Identity = 115/253 (45.45%), Postives = 150/253 (59.29%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQM-DMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGA-DELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWH 309 ++ + VPWHQD AYLDPE+ H LQ TAWIP ++ NGCLQVI HR G TA HTCC GGTWYVQ+ D D + LGV+ D T E+P G VL ++N IPH+SL N S IRWS+DLRWQ ++P GF+GIKD VLMR + ++ N+ + ++ F VDR H++ D G ++E+ + A DE I GPWM RWE+ +HN HTA+ E E +DA +SWH Sbjct: 172 NEQATVPWHQDNAYLDPEALHVLQPTAWIPMLDVQKENGCLQVIPRGHRKGVTATHTCCVGGTWYVQIKDTSDMMTSLGVDVKDA---VTVEMPYGGVLLMNNAIPHQSLENYSDKIRWSLDLRWQRPDKPNGFYGIKDSVLMR---------TSKDPNYTIDFESFNKVDR------------HIKA-VDSMLGTEKELGVSRDTKADDEFDTTIMGPWMKRWELVHHNRHTAKFER--NEDRDDAT-SSWH 396
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003388892.1 (PREDICTED: uncharacterized protein LOC100639747 [Amphimedon queenslandica]) HSP 1 Score: 208.8 bits (530), Expect = 2.500e-50 Identity = 104/231 (45.02%), Postives = 133/231 (57.58%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHT 289 ++ + VPWHQD AYLD TLQ TAWIP I+A NGC+QV++G HR GKTA HTCCAGGTWYV + ++ LGVN + + TCEVPLG VLFL+N +PHRSL N S ++RWS+DLRWQD + GF G++D VLMR S + N ++ W+ F +DR +E+ + D I GPWM RWEIT+ N HT Sbjct: 157 NEETTVPWHQDNAYLDETCLTTLQPTAWIPLIDANMTNGCMQVVKGGHRAGKTATHTCCAGGTWYVDLAEEEIEKTLGVNM--KTDVVTCEVPLGGVLFLNNTVPHRSLENFSENVRWSLDLRWQDPKKSNGFHGLRDCVLMR---------SVDSPNHVINWEGFGILDR-------------------------KELEIDIEDQKDAFDTRIHGPWMKRWEITHSNRHT 351 The following BLAST results are available for this feature:
BLAST of NO24G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01440 ID=NO24G01440|Name=NO24G01440|organism=Nannochloropsis oceanica|type=gene|length=1619bpback to top protein sequence of NO24G01440.1 >NO24G01440.1-protein ID=NO24G01440.1-protein|Name=NO24G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
|