NO24G01440, NO24G01440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01440 vs. NCBI_GenBank
Match: EWM24347.1 (phytanoyl- dioxygenase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 305.8 bits (782), Expect = 1.500e-79 Identity = 182/442 (41.18%), Postives = 217/442 (49.10%), Query Frame = 0 Query: 7 DAASAAAFKEQMASLQKRSAATLKLGPPAWLTHPHCTEGPLNADELHSFFH-------------------DD-----------------------------------------------------------------------------------------------SSVVPWHQDAAYLDPESAHTL---------------------------------QVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHV------------QEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTA 290 D A + AF++Q+ +L+ RSAAT+ + PP WLT P+ T+GPLN EL FF DD SSVVPWHQDAAYLDPE+A TL QVTAWIP ++A A NGCLQV+R AH++G+TA+HTCC GGTWYV+MD+DDASSRLG++C DE W+TCEVPLGSVLFLSNLIPHRSL N S IRWS+DLRWQDA +P GFWGIKD VLM REGGKE E ++V WD FLAVDRG+AQS+AAA A + V AA +D L PVI+GPWMLRW++ +HNAHTA Sbjct: 5 DNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLM----REGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGXXXXXXXXXXXXXXXXXXXXXXDMVLAAXXXXSDALTPVISGPWMLRWDLVHHNAHTA 442
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_005854538.1 (phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >EKU21820.1 phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73 Identity = 173/434 (39.86%), Postives = 206/434 (47.47%), Query Frame = 0 Query: 7 DAASAAAFKEQMASLQKRSAATLKLGPPAWLTHPHCTEGPLNADELHSFFH-------------------DD-----------------------------------------------------------------------------------------------SSVVPWHQDAAYLDPESAHTL---------------------------------QVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHV------------QEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEI 282 D A + AF++Q+ +L+ RSAAT+ + PP WLT P+ T+GPLN EL FF DD SSVVPWHQDAAYLDPE+A TL QVTAWIP ++A A NGCLQV+R AH++G+TA+HTCC GGTWYV+MD+DDASSRLG++C DE W+TCEVPLGSVLFLSNLIPHRSL N S IRWS+DLRWQDA +P GFWGIKD VLM REGGKE E ++V WD FLAVDRG+AQS+AAA A V +D PVI+GPWMLRW++ Sbjct: 5 DNAGSCAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPAMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLM----REGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGXXXXXXXXXXXXXXXXXXXXXXXMVXXXXXXXSDASTPVISGPWMLRWDL 434
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002603086.1 (hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae] >EEN59097.1 hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae]) HSP 1 Score: 236.1 bits (601), Expect = 1.500e-58 Identity = 119/253 (47.04%), Postives = 156/253 (61.66%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 ++ VPWHQD AYL P S TLQ TAWIP ++AT +NGC+Q++RG H+ G TA H CCAGGTWYV++ +D LG C E + TCEVP G VLFL+N +PHRSL N S +IRWS+DLRWQD +P+GFWG ++HVLMR +EE+ + WD F+ V + H++ +E K G+E+ DE P I GPWMLRW+I +HN HT +EE G D + ++WHKA Sbjct: 163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLDATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLG--CDLENDIVTCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR---------TEEDPGYKPVWDGFVDVSK------------HIRYEEIMK--GEEQ-----EHNEDEFDPTIQGPWMLRWKIVHHNRHTKGIEE-----GHDKM-STWHKA 379
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002603083.1 (hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae] >EEN59094.1 hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae]) HSP 1 Score: 235.7 bits (600), Expect = 1.900e-58 Identity = 119/253 (47.04%), Postives = 155/253 (61.26%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 ++ VPWHQD AYL P S TLQ TAWIP +NAT +NGC+Q++RG H+ G TA H CCAGGTWYV++ +D LG C E + TCEVP G VLFL+N +PHRSL N S +IRWS+DLRWQD +P+GFWG ++HVLMR + E+ + WD F+ V + H++ +E K G+E+ DE P I GPWMLRW+I +HN HT +EE G D + ++WHKA Sbjct: 163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLNATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLG--CDLENDIVTCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR---------TAEDPGYKPVWDGFVDVSK------------HIRYEEIMK--GEEQ-----EHNEDEFDPTIQGPWMLRWKIVHHNRHTKGIEE-----GHDKM-STWHKA 379
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019628497.1 (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri]) HSP 1 Score: 235.3 bits (599), Expect = 2.500e-58 Identity = 120/253 (47.43%), Postives = 151/253 (59.68%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311 ++ VPWHQD AYL P S TLQ TAWIP +NAT NGC+Q++RG H+ G TA H CCAGGTWYV++ DD LG C + + TCEVP G VLFL+N +PHRSL N+S DIRWS+DLRWQD +P+GFWG K VLMR +EE+ + W+ F V + H Q D+ K+ +E A DE P I GPWMLRW+I +HN HT G E G + + ++WHKA Sbjct: 163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLNATRENGCMQIVRGGHKKGITAPHVCCAGGTWYVELAEDDMEKTLG--CDMKKDVVTCEVPYGGVLFLNNCVPHRSLENNSNDIRWSLDLRWQDPAKPSGFWGDKKPVLMR---------TEEDPGYKPVWEGFADVSK------------HTQYDDKMKDTDQE-------ANDDEFDPTIQGPWMLRWKIVHHNRHTK-----GLETGHNTI-STWHKA 379
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_005647135.1 (hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169] >EIE22591.1 hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 231.9 bits (590), Expect = 2.700e-57 Identity = 119/240 (49.58%), Postives = 143/240 (59.58%), Query Frame = 0 Query: 59 DSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEG 299 + + VPWHQD YL PES LQVTAWIP + AT RNGC+QVIRG HR GKT KH+CC GGTWYVQMD +DA LGV+ + TCEVP GSVLFL+NLIPHRSL N S IRWS+DLRWQ P GF+G+KD + M + G + W ++ + DR Q KAA +A + E +A VA EL I+GPWM RWE+ +HN H A A G Sbjct: 149 EQATVPWHQDNGYLHPESWEVLQVTAWIPMLTATPRNGCMQVIRGGHRAGKTVKHSCCVGGTWYVQMDEEDAERELGVDM--AADVVTCEVPFGSVLFLNNLIPHRSLDNMSDQIRWSLDLRWQRPGLPNGFYGLKDCITMAKSGEPG---------YAPDWTDWGSQDRTPMQ-KAAISADKIAE---------VTAAADVAQADKELDTTISGPWMDRWELVHHNRHVAAHLAANAAG 367
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019644504.1 (PREDICTED: phytanoyl-CoA dioxygenase-like isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 231.1 bits (588), Expect = 4.700e-57 Identity = 118/234 (50.43%), Postives = 143/234 (61.11%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292 +++ VPWHQD AYL P+ TLQ TAWIP ++AT +NGC+QV++G HR G TA HTCCAGGTWYV++ ++ LG C E + TCEVP G VLFL+N IPHRSL N S +IRWS+DLRWQD N+P+GFWG KD VLMR G K RW+EFL D G E+EDGK +L+P I GPWMLRWEI +HN HT L Sbjct: 163 NEALTVPWHQDNAYLLPDCLGTLQPTAWIPLLDATKKNGCMQVLKGGHRKGITATHTCCAGGTWYVEVSAEEMEKTLG--CDMERDLVTCEVPYGGVLFLNNCIPHRSLENYSDEIRWSLDLRWQDPNKPSGFWGEKDLVLMRTAKDPGYKP---------RWEEFLH-DEG--------------EEEDGK------------VNPADLEPTIQGPWMLRWEIVHHNRHTKAL 358
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003388895.1 (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Amphimedon queenslandica]) HSP 1 Score: 228.8 bits (582), Expect = 2.300e-56 Identity = 118/262 (45.04%), Postives = 147/262 (56.11%), Query Frame = 0 Query: 32 GPPAWLTHPHCTEGPLNADELHSFFHDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEE 294 G P W P + P+N + + VPWHQD AY ES HT TAWIPFI+A NGC+QV++G HR GKTA HTCCAG TWYV + ++ LGVN + + TCEVPLG VLFL+N IPHRSL N S IRWS+DLRWQD +P+GF GIKD +LMR +E++ N+ + W++F DR AQ ++ G EE DE + G WM RW ITNHN HT L + Sbjct: 156 GSPGWNLRP---KTPVN----------EQTTVPWHQDNAYFYEESLHTFIATAWIPFIDANMTNGCMQVVKGGHRAGKTATHTCCAGSTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFLNNCIPHRSLENFSDKIRWSIDLRWQDPKKPSGFEGIKDPILMR---------TEQDPNYQIDWEDFATTDRNTAQKESL---------------GIEE---------DEFDTTVHGQWMSRWPITNHNRHTEALRK 369
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003388894.1 (PREDICTED: uncharacterized protein LOC100640001 isoform X1 [Amphimedon queenslandica]) HSP 1 Score: 220.7 bits (561), Expect = 6.300e-54 Identity = 105/234 (44.87%), Postives = 135/234 (57.69%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292 ++ + VPWHQD AYLD T Q TAWIPFI+A NGC+QV++G HR GKTA HTCCAGGTWYV + ++ LGVN + + TCEVPLG VLF +N +PHRSL N S ++RWS+DLRWQD N+ GF+ +K +LMR S + N+ + W+EF DR K Q + ++ +E + GPWM RW ITNHN HT L Sbjct: 172 NEETTVPWHQDNAYLDETCLTTHQATAWIPFIDANKLNGCVQVVKGGHRAGKTATHTCCAGGTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFFNNCVPHRSLENYSDNVRWSLDLRWQDPNKSPGFYNLKQPILMRTAS---------DPNYKIEWEEFATADRNKIQKE------------------------SLGIDENEFDTTVHGPWMKRWPITNHNRHTKAL 370
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019855953.1 (PREDICTED: uncharacterized protein LOC100640001 isoform X2 [Amphimedon queenslandica]) HSP 1 Score: 220.7 bits (561), Expect = 6.300e-54 Identity = 105/234 (44.87%), Postives = 135/234 (57.69%), Query Frame = 0 Query: 58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292 ++ + VPWHQD AYLD T Q TAWIPFI+A NGC+QV++G HR GKTA HTCCAGGTWYV + ++ LGVN + + TCEVPLG VLF +N +PHRSL N S ++RWS+DLRWQD N+ GF+ +K +LMR S + N+ + W+EF DR K Q + ++ +E + GPWM RW ITNHN HT L Sbjct: 171 NEETTVPWHQDNAYLDETCLTTHQATAWIPFIDANKLNGCVQVVKGGHRAGKTATHTCCAGGTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFFNNCVPHRSLENYSDNVRWSLDLRWQDPNKSPGFYNLKQPILMRTAS---------DPNYKIEWEEFATADRNKIQKE------------------------SLGIDENEFDTTVHGPWMKRWPITNHNRHTKAL 369 The following BLAST results are available for this feature:
BLAST of NO24G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01440 ID=NO24G01440|Name=NO24G01440|organism=Nannochloropsis oceanica|type=gene|length=1619bpback to top protein sequence of NO24G01440.1 >NO24G01440.1-protein ID=NO24G01440.1-protein|Name=NO24G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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