NO24G01310, NO24G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_066345325.1 (magnesium chelatase subunit H [Geminocystis sp. NIES-3708] >BAQ61163.1 protoporphyrin IX Mg-chelatase subunit H [Geminocystis sp. NIES-3708]) HSP 1 Score: 190.3 bits (482), Expect = 7.300e-45 Identity = 103/212 (48.58%), Postives = 124/212 (58.49%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE VLR+EYR+KLLNPKWAKAMA QGSGGAYEISQRMTAL+GW T F D +VYD + YV D++MA L E NPEAFRN+V RMLEANGRG+W+A E LE +K LY EDE+E Sbjct: 1126 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQSGKKVSASFVESFSKDTTPRKLEQVLRMEYRTKLLNPKWAKAMADQGSGGAYEISQRMTALIGWGGTVDFTDNWVYDQAVDTYVLDQDMANKLREANPEAFRNIVGRMLEANGRGFWDADEEKLEKIKSLYEMTEDELE 1285
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_071103646.1 (DUF3479 domain-containing protein [Moorea producens] >AOY80228.1 protoporphyrin IX magnesium chelatase [Moorea producens JHB]) HSP 1 Score: 190.3 bits (482), Expect = 7.300e-45 Identity = 103/212 (48.58%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE +LRLEYR+KLLNPKWA+AMA QGSGGAYEISQRMTAL+GW TA F+D +VYD + Y DEEMAK L + NPEAFRN+V RMLEANGRG+WE E L+ L+ELY ++EIE Sbjct: 1222 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQGGKTVNASFVESFSKDTTPRKLEDLLRLEYRTKLLNPKWAEAMANQGSGGAYEISQRMTALIGWGGTADFQDNWVYDQAADTYALDEEMAKRLRQANPEAFRNIVGRMLEANGRGFWEPDQETLQKLRELYDLTDEEIE 1381
BLAST of NO24G01310 vs. NCBI_GenBank
Match: XP_002501976.1 (magnesium-chelatase subunit chlh-like protein chloroplast precursor [Micromonas commoda] >ACO63234.1 magnesium-chelatase subunit chlh-like protein chloroplast precursor [Micromonas commoda]) HSP 1 Score: 189.9 bits (481), Expect = 9.600e-45 Identity = 106/212 (50.00%), Postives = 131/212 (61.79%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTGAL AA N A + A +P + V SI+E F +VAP+ LE LR+EYR+KLLNP+WA+AM+ QGSGGAYEISQRMTALVGW +T+GF + +VYDG ERYV+DEEM + L + NP+AFRNV+KRMLEA GRG W A +VL+ L+ LYAE ED +E Sbjct: 1381 LTDIQEYYANTGAL-VAAANAAKEDDANA------------------------------------------GKPIKKVACSIVETFGDDVAPRDLEETLRMEYRTKLLNPRWAEAMSQQGSGGAYEISQRMTALVGWGATSGFAEDWVYDGAHERYVEDEEMRERLRKANPQAFRNVLKRMLEAAGRGLWNADEKVLDELRALYAETEDALE 1549
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_015149859.1 (magnesium chelatase subunit H [Oscillatoria acuminata] >AFY83232.1 cobaltochelatase CobN subunit [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 189.9 bits (481), Expect = 9.600e-45 Identity = 105/212 (49.53%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE T GK+ V S+IE+F+K+ P+ LE +LRLEYR+KLLNPKWA++MA QGSGGAYEISQRMTAL+GW T FKD +VYDG E Y D EMA L + NPEAFRN+V RMLEA+GRG+W P+ LE L+ LY+ EDEIE Sbjct: 1076 LTDIQEYYANTGGLKRAAE------------------------------------------------TQSGKK----VTASLIESFSKDTTPRKLEDLLRLEYRTKLLNPKWAESMANQGSGGAYEISQRMTALIGWGGTVDFKDNWVYDGASETYAFDPEMANKLRKANPEAFRNIVGRMLEAHGRGFWNPDPDKLEKLQALYSVTEDEIE 1235
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_017292701.1 (magnesium chelatase subunit H [Geminocystis herdmanii]) HSP 1 Score: 189.1 bits (479), Expect = 1.600e-44 Identity = 102/212 (48.11%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S IE+F+++ P+ L+ VLR+EYR+KLLNPKWAKAMA QGSGGAYEISQRMTAL+GW A F D +VYD + YV D++MA L E NPEAFRN+V RMLEANGRG+W+A E L+ LK+LY + EDE+E Sbjct: 1157 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQSGKKVSASFIESFSQDTTPRKLDQVLRMEYRTKLLNPKWAKAMADQGSGGAYEISQRMTALIGWGGVADFTDNWVYDQAVDTYVLDQDMANKLREANPEAFRNIVGRMLEANGRGFWDADEEKLDKLKDLYEKTEDELE 1316
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_017719122.1 (magnesium chelatase subunit H [Oscillatoria sp. PCC 10802]) HSP 1 Score: 189.1 bits (479), Expect = 1.600e-44 Identity = 105/212 (49.53%), Postives = 125/212 (58.96%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE L G+R V S +E+F+K+ P+ LE +LRLEYR+KLLNPKWA AMA QGSGGAYEISQRMTAL+GW TA F D +VYDG + Y D EMAK L E NPEAFRN+V RMLEANGRG+WE E LE L++LY ++E+E Sbjct: 1074 LTDIQEYYANTGGLKRAAEK------------------------------------------------LRGER----VSASFVESFSKDTTPRKLEDLLRLEYRTKLLNPKWATAMANQGSGGAYEISQRMTALIGWGGTADFTDAWVYDGAADTYALDPEMAKKLREANPEAFRNIVGRMLEANGRGFWEPDAEKLEKLRQLYELTDEELE 1233
BLAST of NO24G01310 vs. NCBI_GenBank
Match: XP_001417934.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO96227.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 189.1 bits (479), Expect = 1.600e-44 Identity = 105/212 (49.53%), Postives = 128/212 (60.38%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTGAL AA+ G K P V SI+E F K+V P+ L+ LR+EYR+KLLNP+WA AMA QGSGGAYEISQRMTALVGW +T+GF + +VYDG E YV+DEEM L ++NP+AFRNVVKRMLEA GRG W+A E LE L+EL+++ EDE+E Sbjct: 1096 LTDIQEYYANTGALVAAAK--------------------------------------------AAKEDAGVKNPD--VACSIVETFGKDVTPKDLDETLRMEYRTKLLNPRWATAMADQGSGGAYEISQRMTALVGWGATSGFAENWVYDGAHETYVEDEEMRDKLRKSNPQAFRNVVKRMLEAAGRGMWDADEETLENLRELFSDVEDEME 1261
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_066116429.1 (magnesium chelatase subunit H [Geminocystis sp. NIES-3709] >BAQ64020.1 protoporphyrin IX Mg-chelatase subunit H [Geminocystis sp. NIES-3709]) HSP 1 Score: 188.3 bits (477), Expect = 2.800e-44 Identity = 100/212 (47.17%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK++AE K+ + V S +E+F+++ P+ L+ VLR+EYR+KLLNPKWAKAMA QGSGGAYEISQRMTAL+GW A F D +VYD + YV D++MA L E NPEAFRN+V RMLEANGRG+W+A E L+ LK+LY + EDE+E Sbjct: 1111 LTDIQEYYANTGGLKRSAE----------------------------------------------------KQSSKKVTASFVESFSQDTTPRKLDQVLRMEYRTKLLNPKWAKAMADQGSGGAYEISQRMTALIGWGGVADFTDNWVYDQAVDTYVLDQDMANKLREANPEAFRNIVGRMLEANGRGFWDADEEKLDKLKDLYEKTEDELE 1270
BLAST of NO24G01310 vs. NCBI_GenBank
Match: OZH54811.1 (protoporphyrin IX magnesium chelatase, partial [Hydrocoleum sp. CS-953]) HSP 1 Score: 188.0 bits (476), Expect = 3.600e-44 Identity = 105/218 (48.17%), Postives = 127/218 (58.26%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIELSGGKG 219 +TDIQEYYANTG LK AAE KR K+ V S +E+F+K+ P+ LE +LR+EYR+KLLNPKWA+AMA QGSGGAYEISQRMTAL+GW TA F D +VYDG E Y D EMA+ L E NPEAFRN++ RMLEANGRG W+A E L+ L++LY ++EIE G G Sbjct: 372 LTDIQEYYANTGGLKLAAEK---------------------------------------------------KRGKK-VSASFVESFSKDTTPRKLEDLLRMEYRTKLLNPKWAEAMANQGSGGAYEISQRMTALIGWGGTANFADNWVYDGAAETYALDAEMAQKLREANPEAFRNIIGRMLEANGRGLWQADEEKLQKLRQLYDLTDEEIEGVSGLG 537
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_062433219.1 (magnesium chelatase subunit H [Synechococcus sp. PCC 73109] >AMA08753.1 protoporphyrin IX magnesium chelatase [Synechococcus sp. PCC 73109]) HSP 1 Score: 187.6 bits (475), Expect = 4.800e-44 Identity = 102/212 (48.11%), Postives = 124/212 (58.49%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LKKAAEN + + V S +E+F+K+ P+ LESVLR+EYRSKLLNPKWA+AMA QGSGGAYEISQRMTAL+GW T F+D++VYD E Y D MA+ L E NPEAFRN+V RMLEA+GRG+WEA E L+ L +LY +D +E Sbjct: 1075 LTDIQEYYANTGGLKKAAENASG----------------------------------------------------KTVTASFVESFSKDTTPRKLESVLRMEYRSKLLNPKWAEAMADQGSGGAYEISQRMTALIGWGGTVDFQDQWVYDQAAETYALDTTMAQKLREANPEAFRNIVGRMLEAHGRGFWEASDEKLQKLSDLYDLTDDVLE 1234 The following BLAST results are available for this feature:
BLAST of NO24G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01310 ID=NO24G01310|Name=NO24G01310|organism=Nannochloropsis oceanica|type=gene|length=944bpback to top protein sequence of NO24G01310.1 >NO24G01310.1-protein ID=NO24G01310.1-protein|Name=NO24G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=249bpback to top Synonyms
Publications
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