NO24G01310, NO24G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01310 vs. NCBI_GenBank
Match: XP_005855588.1 (protoporphyrin IX Mg-chelatase subunit H [Nannochloropsis gaditana CCMP526] >EKU20780.1 protoporphyrin IX Mg-chelatase subunit H [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 289.3 bits (739), Expect = 1.200e-74 Identity = 158/257 (61.48%), Postives = 181/257 (70.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIELSGGKGVRKKVLREQESEKE-----------GGVVKRLAAEKTPV 247 ++DIQEYYANTGALKKAAEN+AN+P+R + G ++ KRVV VSI+EAFTK+VAPQ LE+ LRLEYRSKLLNPKWA+AMAAQGSGGAYEISQRMTALVGWSSTAGF+D++VYDG ERYV DE+MA+ LM+NNPEA RNVVKRMLEANGRGYWE PEVLE L+E+YA AEDEIELSGGKGVRKKVLRE EK ++K L E+ PV Sbjct: 904 LSDIQEYYANTGALKKAAENIANAPDRSGKNTAAPPRAQPAPSQGRADSDQQGGK--------------GEEKKKRVVKVSIVEAFTKDVAPQELEATLRLEYRSKLLNPKWAEAMAAQGSGGAYEISQRMTALVGWSSTAGFRDQWVYDGAVERYVLDEKMAQKLMDNNPEAMRNVVKRMLEANGRGYWETTPEVLEHLREMYAAAEDEIELSGGKGVRKKVLREDGGEKSAPTPREEVKVVSAMMKNLKEERAPV 1146
BLAST of NO24G01310 vs. NCBI_GenBank
Match: EWM24338.1 (magnesium h subunit [Nannochloropsis gaditana]) HSP 1 Score: 289.3 bits (739), Expect = 1.200e-74 Identity = 158/257 (61.48%), Postives = 181/257 (70.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIELSGGKGVRKKVLREQESEKE-----------GGVVKRLAAEKTPV 247 ++DIQEYYANTGALKKAAEN+AN+P+R + G ++ KRVV VSI+EAFTK+VAPQ LE+ LRLEYRSKLLNPKWA+AMAAQGSGGAYEISQRMTALVGWSSTAGF+D++VYDG ERYV DE+MA+ LM+NNPEA RNVVKRMLEANGRGYWE PEVLE L+E+YA AEDEIELSGGKGVRKKVLRE EK ++K L E+ PV Sbjct: 1485 LSDIQEYYANTGALKKAAENIANAPDRSGKNTAAPPRAQPAPSQGRADSDQQEGK--------------GEEKKKRVVKVSIVEAFTKDVAPQELEATLRLEYRSKLLNPKWAEAMAAQGSGGAYEISQRMTALVGWSSTAGFRDQWVYDGAVERYVLDEKMAQKLMDNNPEAMRNVVKRMLEANGRGYWETTPEVLEHLREMYAAAEDEIELSGGKGVRKKVLREDGGEKSAPTPREEVKVVSAMMKNLKEERAPV 1727
BLAST of NO24G01310 vs. NCBI_GenBank
Match: CBJ27229.1 (Magnesium chelatase subunit H, putative chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 204.5 bits (519), Expect = 3.800e-49 Identity = 108/216 (50.00%), Postives = 138/216 (63.89%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIELSGG 217 +TDIQEYYANTGALKKAAE+ + G++P R V VSI+EA+ KEVAP+ LE+ LR+EYRSKLLNPKWA+AM+ QGSGGAYEISQRMTAL+GWS T+GF D++VYDG + Y D++MA L + NPEA++N++KRMLEA GRG+W VLE +++ YA+ ED+IEL G Sbjct: 1241 LTDIQEYYANTGALKKAAES-----------------------------------------RQAKDADPDGQQPARRVGVSIVEAYGKEVAPRELEATLRIEYRSKLLNPKWAEAMSNQGSGGAYEISQRMTALIGWSGTSGFTDEWVYDGAADTYALDDDMAAKLRKANPEAYQNILKRMLEAKGRGFWSPEDHVLERIQQQYADVEDDIELGTG 1415
BLAST of NO24G01310 vs. NCBI_GenBank
Match: CEL94421.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 202.6 bits (514), Expect = 1.400e-48 Identity = 109/212 (51.42%), Postives = 135/212 (63.68%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTGALKKAA+N S GK+ K V VSI+E+F+K V P+ LE LR+EYR+KLLNPKWA+AMA QGSGGAYEISQRMTALVGW+ T F + +VYDG ERY DE MA+ L + NPEAF+NV++RMLEANGRG+W+A + L+ L+E+Y++ EDEIE Sbjct: 1342 LTDIQEYYANTGALKKAADNARES---------------------------------------------AGKKGK--VKVSILESFSKAVEPRDLEQTLRMEYRTKLLNPKWAEAMAKQGSGGAYEISQRMTALVGWAGTTDFAEDWVYDGAAERYAMDEAMAEKLRKANPEAFQNVLRRMLEANGRGFWKADEKTLDKLREMYSQTEDEIE 1506
BLAST of NO24G01310 vs. NCBI_GenBank
Match: XP_003057619.1 (magnesium-chelatase subunit chlh-like protein chloroplast precursor [Micromonas pusilla CCMP1545] >EEH57570.1 magnesium-chelatase subunit chlh-like protein chloroplast precursor [Micromonas pusilla CCMP1545]) HSP 1 Score: 196.1 bits (497), Expect = 1.300e-46 Identity = 112/213 (52.58%), Postives = 137/213 (64.32%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKR-PKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTGAL AA N A E + E TT G KR P++ V S++E F ++VAP+ LE LRLEYR+KLLNP+WA AMA QGSGGAYEISQRMTALVGW +T+GF + +V+DG ERYV+DE M + L + NP+AFRNV++RMLEA GRG W A E L LK+LYAEA+DE+E Sbjct: 1117 LTDIQEYYANTGAL-VAAANAAK--EGLPE---------------------------------ETTDANGRKRFPRKKVACSVVETFGEDVAPRDLEETLRLEYRTKLLNPRWADAMADQGSGGAYEISQRMTALVGWGATSGFAEDWVFDGANERYVRDEAMREKLRKANPQAFRNVLRRMLEAAGRGMWNADEETLAELKQLYAEADDELE 1293
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_008181318.1 (DUF3479 domain-containing protein [Moorea producens] >EGJ34164.1 hydrogenobyrinic acid a,c-diamide cobaltochelatase [Moorea producens 3L] >OLT65120.1 protoporphyrin IX magnesium chelatase [Moorea producens PAL]) HSP 1 Score: 191.8 bits (486), Expect = 2.500e-45 Identity = 104/212 (49.06%), Postives = 127/212 (59.91%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE +LRLEYR+KLLNPKWA+AMA QGSGGAYEISQRMTAL+GW TA F+D +VYD + Y DEEMAK L + NPEAFRN+V RMLEANGRG+WE E L+ L+ELY A++EIE Sbjct: 1205 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQGGKTVNASFVESFSKDTTPRKLEDLLRLEYRTKLLNPKWAEAMAHQGSGGAYEISQRMTALIGWGGTADFQDNWVYDQAADTYALDEEMAKRLRQANPEAFRNIVGRMLEANGRGFWEPDQETLQKLRELYDLADEEIE 1364
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_075898807.1 (DUF3479 domain-containing protein [Moorea bouillonii] >OLT59434.1 protoporphyrin IX magnesium chelatase [Moorea bouillonii PNG]) HSP 1 Score: 191.4 bits (485), Expect = 3.300e-45 Identity = 104/212 (49.06%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE +LRLEYR+KLLNPKWA+AMA QGSGGAYEISQRMTAL+GW TA F+D +VYD + Y DEEMAK L + NPEAFRN+V RMLEANGRG+WE E L+ L+ELY A+ EIE Sbjct: 1189 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQGGKTVNASFVESFSKDTTPRKLEDLLRLEYRTKLLNPKWAEAMANQGSGGAYEISQRMTALIGWGGTADFQDNWVYDQAADTYALDEEMAKRLRQANPEAFRNIVGRMLEANGRGFWEPNQETLQKLRELYDLADQEIE 1348
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_070392219.1 (magnesium chelatase subunit H [Moorea producens] >AOW99743.1 magnesium chelatase subunit H [Moorea producens PAL-8-15-08-1]) HSP 1 Score: 191.0 bits (484), Expect = 4.300e-45 Identity = 104/212 (49.06%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE +LRLEYR+KLLNPKWA+AMA QGSGGAYEISQRMTAL+GW TA F+D +VYD + Y DEEMAK L + NPEAFRN+V RMLEANGRG+WE E L+ L+ELY A+ EIE Sbjct: 1125 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQGGKTVNASFVESFSKDTTPRKLEDLLRLEYRTKLLNPKWAEAMANQGSGGAYEISQRMTALIGWGGTADFQDNWVYDQAADTYALDEEMAKRLQQANPEAFRNIVGRMLEANGRGFWEPDHETLQKLRELYDLADQEIE 1284
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_015218585.1 (magnesium chelatase subunit H [Cyanobacterium aponinum] >AFZ52854.1 cobaltochelatase CobN subunit [Cyanobacterium aponinum PCC 10605]) HSP 1 Score: 190.7 bits (483), Expect = 5.600e-45 Identity = 103/212 (48.58%), Postives = 124/212 (58.49%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE VLR+EYR+KLLNPKWAKAMA QGSGGAYEISQRMTAL+GW T F D +VYD + YV D++MA L E NPEAFRN+V RMLEANGRG+W+A E LE +K LY EDE+E Sbjct: 1132 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQSGKKVSASFVESFSKDTTPRKLEQVLRMEYRTKLLNPKWAKAMAEQGSGGAYEISQRMTALIGWGGTVDFTDNWVYDQAVDTYVLDQDMANKLREANPEAFRNIVGRMLEANGRGFWDADEEKLEKIKSLYEMTEDELE 1291
BLAST of NO24G01310 vs. NCBI_GenBank
Match: WP_099434649.1 (magnesium chelatase subunit H [Cyanobacterium aponinum] >PHV64407.1 magnesium chelatase subunit H [Cyanobacterium aponinum IPPAS B-1201]) HSP 1 Score: 190.7 bits (483), Expect = 5.600e-45 Identity = 103/212 (48.58%), Postives = 124/212 (58.49%), Query Frame = 0 Query: 1 MTDIQEYYANTGALKKAAENVANSPERIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTLGGKRPKRVVPVSIIEAFTKEVAPQSLESVLRLEYRSKLLNPKWAKAMAAQGSGGAYEISQRMTALVGWSSTAGFKDKFVYDGVCERYVQDEEMAKTLMENNPEAFRNVVKRMLEANGRGYWEAGPEVLELLKELYAEAEDEIE 213 +TDIQEYYANTG LK+AAE K+ + V S +E+F+K+ P+ LE VLR+EYR+KLLNPKWAKAMA QGSGGAYEISQRMTAL+GW T F D +VYD + YV D++MA L E NPEAFRN+V RMLEANGRG+W+A E LE +K LY EDE+E Sbjct: 1132 LTDIQEYYANTGGLKRAAE----------------------------------------------------KQSGKKVSASFVESFSKDTTPRKLEQVLRMEYRTKLLNPKWAKAMAEQGSGGAYEISQRMTALIGWGGTVDFTDNWVYDQAVDTYVLDQDMANKLREANPEAFRNIVGRMLEANGRGFWDADEEKLEKIKSLYEMTEDELE 1291 The following BLAST results are available for this feature:
BLAST of NO24G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01310 ID=NO24G01310|Name=NO24G01310|organism=Nannochloropsis oceanica|type=gene|length=944bpback to top protein sequence of NO24G01310.1 >NO24G01310.1-protein ID=NO24G01310.1-protein|Name=NO24G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=249bpback to top Synonyms
Publications
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